RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ATP6V0E2Q8NHE4 81 aa14.81□□□□□ -0.04
COL13A1-202ENST00000357811 UBE2D4Q9Y2X8 147 aa14.81□□□□□ -0.04
COL13A1-202ENST00000357811 TRBV20-1A0A075B6N2 111 aa14.8□□□□□ -0.04
COL13A1-202ENST00000357811 LYRM7Q5U5X0 104 aa14.8□□□□□ -0.04
COL13A1-202ENST00000357811 CFAP161Q6P656 301 aa14.8□□□□□ -0.04
COL13A1-202ENST00000357811 TRGV1A0A0A0MS02 117 aa14.8□□□□□ -0.04
COL13A1-202ENST00000357811 C11orf72Q8NBR9 251 aa14.8□□□□□ -0.04
COL13A1-202ENST00000357811 MRPS36P82909 103 aaKnown RBP14.79□□□□□ -0.04
COL13A1-202ENST00000357811 DGAT2L7PQ6IED9 249 aa14.79□□□□□ -0.04
COL13A1-202ENST00000357811 TEN1Q86WV5 123 aa14.79□□□□□ -0.04
COL13A1-202ENST00000357811 CDKN2A-AS1Q9UH64 79 aa14.79□□□□□ -0.04
COL13A1-202ENST00000357811 RNF152Q8N8N0 203 aa14.79□□□□□ -0.04
COL13A1-202ENST00000357811 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.78□□□□□ -0.04
COL13A1-202ENST00000357811 DEFB113Q30KQ7 82 aa14.78□□□□□ -0.04
COL13A1-202ENST00000357811 SHISA2Q6UWI4 295 aa14.78□□□□□ -0.04
COL13A1-202ENST00000357811 GCN1Q92616 2671 aaKnown RBP14.77□□□□□ -0.04
COL13A1-202ENST00000357811 SLC25A20O43772 301 aa14.77□□□□□ -0.04
COL13A1-202ENST00000357811 INSP01308 110 aa14.77□□□□□ -0.04
COL13A1-202ENST00000357811 ODF3L2Q3SX64 289 aa14.77□□□□□ -0.04
COL13A1-202ENST00000357811 PYGO1Q9Y3Y4 419 aa14.77□□□□□ -0.04
COL13A1-202ENST00000357811 IGHV1-58A0A0C4DH39 117 aa14.77□□□□□ -0.05
COL13A1-202ENST00000357811 C4orf3Q8WVX3 66 aa14.77□□□□□ -0.05
COL13A1-202ENST00000357811 LITAFQ99732 161 aa14.76□□□□□ -0.05
COL13A1-202ENST00000357811 LINC00694P0DN24 101 aa14.76□□□□□ -0.05
COL13A1-202ENST00000357811 STHQ8IWL8 128 aa14.76□□□□□ -0.05
COL13A1-202ENST00000357811 VSIG2Q96IQ7 327 aa14.76□□□□□ -0.05
COL13A1-202ENST00000357811 WFDC10AQ9H1F0 79 aa14.76□□□□□ -0.05
COL13A1-202ENST00000357811 HIVEP2P31629 2446 aa14.75□□□□□ -0.05
COL13A1-202ENST00000357811 COX6A2Q02221 97 aa14.75□□□□□ -0.05
COL13A1-202ENST00000357811 TENM4Q6N022 2769 aa14.75□□□□□ -0.05
COL13A1-202ENST00000357811 TRAV13-1A0A0B4J241 112 aa14.74□□□□□ -0.05
COL13A1-202ENST00000357811 TRIAP1O43715 76 aa14.74□□□□□ -0.05
COL13A1-202ENST00000357811 HERV-K104P63124 156 aa14.74□□□□□ -0.05
COL13A1-202ENST00000357811 SMIM20Q8N5G0 67 aa14.74□□□□□ -0.05
COL13A1-202ENST00000357811 Q6ZTI0 123 aa14.74□□□□□ -0.05
COL13A1-202ENST00000357811 WFDC11Q8NEX6 87 aa14.73□□□□□ -0.05
COL13A1-202ENST00000357811 C1orf158Q8N1D5 194 aa14.73□□□□□ -0.05
COL13A1-202ENST00000357811 PLA2G2AP14555 144 aa14.72□□□□□ -0.05
COL13A1-202ENST00000357811 A0A0B4J2C4 111 aa14.72□□□□□ -0.05
COL13A1-202ENST00000357811 GAGE2BQ13066 116 aa14.71□□□□□ -0.05
COL13A1-202ENST00000357811 GAGE2EQ4V326 116 aa14.71□□□□□ -0.05
COL13A1-202ENST00000357811 ZNF843Q8N446 348 aa14.71□□□□□ -0.05
COL13A1-202ENST00000357811 NTN5Q8WTR8 489 aaPredicted RBP14.71□□□□□ -0.05
COL13A1-202ENST00000357811 GAGE2DQ9UEU5 116 aa14.71□□□□□ -0.05
COL13A1-202ENST00000357811 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.71□□□□□ -0.05
COL13A1-202ENST00000357811 TINCRA0A1B0GVN0 87 aa14.71□□□□□ -0.05
COL13A1-202ENST00000357811 NHLRC4P0CG21 123 aaPredicted RBP14.71□□□□□ -0.05
COL13A1-202ENST00000357811 CLEC2BQ92478 149 aa14.71□□□□□ -0.05
COL13A1-202ENST00000357811 SPANXA1Q9NS26 97 aa14.71□□□□□ -0.05
COL13A1-202ENST00000357811 GAGE12JA6NER3 117 aa14.7□□□□□ -0.06
COL13A1-202ENST00000357811 CCDC179H3BU77 68 aa14.7□□□□□ -0.06
COL13A1-202ENST00000357811 GAGE4Q13068 117 aa14.7□□□□□ -0.06
COL13A1-202ENST00000357811 A8MTW9 85 aa14.7□□□□□ -0.06
COL13A1-202ENST00000357811 SNCGO76070 127 aa14.7□□□□□ -0.06
COL13A1-202ENST00000357811 TTC32Q5I0X7 151 aa14.7□□□□□ -0.06
COL13A1-202ENST00000357811 Q8N2B8 174 aa14.69□□□□□ -0.06
COL13A1-202ENST00000357811 TRAV4A0A0B4J268 109 aa14.69□□□□□ -0.06
COL13A1-202ENST00000357811 TMEM101Q96IK0 257 aa14.69□□□□□ -0.06
COL13A1-202ENST00000357811 NOP10Q9NPE3 64 aaKnown RBP14.69□□□□□ -0.06
COL13A1-202ENST00000357811 IGKV3OR2-268A0A0C4DH90 116 aa14.68□□□□□ -0.06
COL13A1-202ENST00000357811 TEX49A0A1B0GTD5 131 aa14.68□□□□□ -0.06
COL13A1-202ENST00000357811 DNAJC9-AS1A6NH13 148 aa14.68□□□□□ -0.06
COL13A1-202ENST00000357811 TMEM262E9PQX1 116 aa14.68□□□□□ -0.06
COL13A1-202ENST00000357811 RPL35AP18077 110 aaKnown RBP14.68□□□□□ -0.06
COL13A1-202ENST00000357811 ESM1Q9NQ30 184 aa14.68□□□□□ -0.06
COL13A1-202ENST00000357811 CCL24O00175 119 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 RS1O15537 224 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 CRLF1O75462 422 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 LINC01620Q4KN68 170 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 CITED2Q99967 270 aaPredicted RBP14.67□□□□□ -0.06
COL13A1-202ENST00000357811 EDA2RQ9HAV5 297 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 GAGE7O76087 117 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 GAGE12FP0CL80 117 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 GAGE12GP0CL81 117 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 GAGE12IP0CL82 117 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 Q9H8V8 135 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 NDUFV3P56181 108 aaKnown RBP14.67□□□□□ -0.06
COL13A1-202ENST00000357811 MIAQ16674 131 aa14.67□□□□□ -0.06
COL13A1-202ENST00000357811 BEAN1Q3B7T3 259 aa14.66□□□□□ -0.06
COL13A1-202ENST00000357811 SBSPONQ8IVN8 264 aa14.66□□□□□ -0.06
COL13A1-202ENST00000357811 ICOSQ9Y6W8 199 aa14.66□□□□□ -0.06
COL13A1-202ENST00000357811 HELZ2Q9BYK8 2649 aaKnown RBP14.65□□□□□ -0.06
COL13A1-202ENST00000357811 LOC100131303A0A0U1RQF7 123 aa14.65□□□□□ -0.06
COL13A1-202ENST00000357811 ATXN8Q156A1 80 aa14.65□□□□□ -0.06
COL13A1-202ENST00000357811 NTM-AS1Q6ZSK4 140 aa14.65□□□□□ -0.06
COL13A1-202ENST00000357811 KRTAP1-3Q8IUG1 177 aa14.65□□□□□ -0.06
COL13A1-202ENST00000357811 RPL13AP40429 203 aaKnown RBP14.64□□□□□ -0.07
COL13A1-202ENST00000357811 LINC00242Q5T6M2 205 aa14.64□□□□□ -0.07
COL13A1-202ENST00000357811 CITED1Q99966 193 aa14.64□□□□□ -0.07
COL13A1-202ENST00000357811 FASNP49327 2511 aaKnown RBP14.63□□□□□ -0.07
COL13A1-202ENST00000357811 IFITM1P13164 125 aa14.62□□□□□ -0.07
COL13A1-202ENST00000357811 RPL36AP83881 106 aaKnown RBP14.61□□□□□ -0.07
COL13A1-202ENST00000357811 RPL36ALQ969Q0 106 aaKnown RBP14.61□□□□□ -0.07
COL13A1-202ENST00000357811 DNAJC30Q96LL9 226 aa14.61□□□□□ -0.07
COL13A1-202ENST00000357811 C3orf56Q8N813 242 aa14.61□□□□□ -0.07
COL13A1-202ENST00000357811 VWFP04275 2813 aa14.61□□□□□ -0.07
COL13A1-202ENST00000357811 SPANXDQ9BXN6 97 aa14.61□□□□□ -0.07
COL13A1-202ENST00000357811 SPANXCQ9NY87 97 aa14.61□□□□□ -0.07
COL13A1-202ENST00000357811 TRGV2A0A075B6R0 118 aa14.6□□□□□ -0.07
COL13A1-202ENST00000357811 TRBV30A0A0K0K1B3 111 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms