RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 Q8N6K4 173 aa8.82□□□□□ -1
COL9A1-202ENST00000357250 DSCAML1Q8TD84 2053 aa8.81□□□□□ -1
COL9A1-202ENST00000357250 TRBV27A0A0K0K1C4 114 aa8.81□□□□□ -1
COL9A1-202ENST00000357250 IBA57-AS1B1ANH7 110 aa8.81□□□□□ -1
COL9A1-202ENST00000357250 IGHV4-31P0DP07 118 aa8.81□□□□□ -1
COL9A1-202ENST00000357250 CLEC2BQ92478 149 aa8.81□□□□□ -1
COL9A1-202ENST00000357250 IGHV4-4A0A075B6R2 117 aa8.81□□□□□ -1
COL9A1-202ENST00000357250 IGKV3D-7A0A0C4DH55 119 aa8.81□□□□□ -1
COL9A1-202ENST00000357250 NDUFS5O43920 106 aa8.81□□□□□ -1
COL9A1-202ENST00000357250 CENPEQ02224 2701 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 TMEM223A0PJW6 202 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 NCR3O14931 201 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 RS1O15537 224 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 ZNF22P17026 224 aaPredicted RBP8.8□□□□□ -1
COL9A1-202ENST00000357250 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 Q6ZTI0 123 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 M0QY20 66 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 UBE2AP49459 152 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 VPS13AQ96RL7 3174 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 TIMM17BO60830 172 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 TCL1BO95988 128 aa8.8□□□□□ -1
COL9A1-202ENST00000357250 CRIP1P50238 77 aa8.79□□□□□ -1
COL9A1-202ENST00000357250 ATP5EP2Q5VTU8 51 aa8.79□□□□□ -1
COL9A1-202ENST00000357250 P0DMU3 169 aa8.79□□□□□ -1
COL9A1-202ENST00000357250 FAM231AP0DMU4 169 aa8.79□□□□□ -1
COL9A1-202ENST00000357250 FAM231CP0DMU5 169 aa8.79□□□□□ -1
COL9A1-202ENST00000357250 PIK3CD-AS1Q5SR53 167 aa8.79□□□□□ -1
COL9A1-202ENST00000357250 TP73-AS1Q9UF72 201 aa8.79□□□□□ -1
COL9A1-202ENST00000357250 J3KT08 172 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 IGLV2-11P01706 119 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 RNF185Q96GF1 192 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 ESM1Q9NQ30 184 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 REG3AQ06141 175 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 C20orf173Q96LM9 149 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 PSMG3-AS1Q96PY0 264 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 TP53TG3Q9ULZ0 132 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 CDKN2A-AS1Q9UH64 79 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 MGAQ8IWI9 3026 aa8.78□□□□□ -1
COL9A1-202ENST00000357250 TRBV30A0A0K0K1B3 111 aa8.77□□□□□ -1
COL9A1-202ENST00000357250 LINC00467Q9BRT7 94 aa8.77□□□□□ -1
COL9A1-202ENST00000357250 FAM222AQ5U5X8 452 aa8.77□□□□□ -1.01
COL9A1-202ENST00000357250 MIFP14174 115 aa8.77□□□□□ -1.01
COL9A1-202ENST00000357250 CEMP1Q6PRD7 247 aaPredicted RBP8.77□□□□□ -1.01
COL9A1-202ENST00000357250 CFAP126Q5VTH2 177 aa8.76□□□□□ -1.01
COL9A1-202ENST00000357250 VCANP13611 3396 aa8.76□□□□□ -1.01
COL9A1-202ENST00000357250 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
COL9A1-202ENST00000357250 CNFNQ9BYD5 112 aa8.76□□□□□ -1.01
COL9A1-202ENST00000357250 MRGPRG-AS1Q2M3A8 158 aa8.75□□□□□ -1.01
COL9A1-202ENST00000357250 C11orf45Q8TAV5 145 aa8.75□□□□□ -1.01
COL9A1-202ENST00000357250 TRBV6-8A0A0A6YYG3 113 aa8.75□□□□□ -1.01
COL9A1-202ENST00000357250 KLLNB2CW77 178 aa8.75□□□□□ -1.01
COL9A1-202ENST00000357250 CHCHD10Q8WYQ3 142 aaPredicted RBP8.75□□□□□ -1.01
COL9A1-202ENST00000357250 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
COL9A1-202ENST00000357250 LINC00269Q8N2A0 174 aa8.74□□□□□ -1.01
COL9A1-202ENST00000357250 MUC7Q8TAX7 377 aa8.74□□□□□ -1.01
COL9A1-202ENST00000357250 SS18L2Q9UHA2 77 aa8.74□□□□□ -1.01
COL9A1-202ENST00000357250 Q6ZSV7 163 aa8.74□□□□□ -1.01
COL9A1-202ENST00000357250 B9D2Q9BPU9 175 aa8.74□□□□□ -1.01
COL9A1-202ENST00000357250 IGHV4-28A0A0C4DH34 117 aa8.74□□□□□ -1.01
COL9A1-202ENST00000357250 PTH2Q96A98 100 aa8.74□□□□□ -1.01
COL9A1-202ENST00000357250 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
COL9A1-202ENST00000357250 NDUFC2O95298 119 aa8.73□□□□□ -1.01
COL9A1-202ENST00000357250 NRACQ8N912 160 aa8.73□□□□□ -1.01
COL9A1-202ENST00000357250 DEFB4AO15263 64 aa8.73□□□□□ -1.01
COL9A1-202ENST00000357250 CELSR3Q9NYQ7 3312 aa8.73□□□□□ -1.01
COL9A1-202ENST00000357250 IGLV1-40P01703 118 aa8.72□□□□□ -1.01
COL9A1-202ENST00000357250 POLR2KP53803 58 aaKnown RBP8.72□□□□□ -1.01
COL9A1-202ENST00000357250 C14orf132Q9NPU4 83 aa8.72□□□□□ -1.01
COL9A1-202ENST00000357250 DNAH14Q0VDD8 3507 aa8.72□□□□□ -1.01
COL9A1-202ENST00000357250 BPY2O14599 106 aa8.72□□□□□ -1.01
COL9A1-202ENST00000357250 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
COL9A1-202ENST00000357250 C9orf85Q96MD7 179 aa8.72□□□□□ -1.01
COL9A1-202ENST00000357250 TNRC6BQ9UPQ9 1833 aaKnown RBP8.72□□□□□ -1.01
COL9A1-202ENST00000357250 LAMA1P25391 3075 aa8.71□□□□□ -1.01
COL9A1-202ENST00000357250 RNASE3P12724 160 aaKnown RBP8.71□□□□□ -1.01
COL9A1-202ENST00000357250 CHKB-CPT1BH3BT56 60 aa8.71□□□□□ -1.02
COL9A1-202ENST00000357250 WFDC9Q8NEX5 89 aa8.71□□□□□ -1.02
COL9A1-202ENST00000357250 IGKV2D-26A0A0A0MRZ7 120 aa8.71□□□□□ -1.02
COL9A1-202ENST00000357250 A0A1W2PPR1 153 aa8.71□□□□□ -1.02
COL9A1-202ENST00000357250 SPATA25Q9BR10 227 aa8.71□□□□□ -1.02
COL9A1-202ENST00000357250 WFDC11Q8NEX6 87 aa8.7□□□□□ -1.02
COL9A1-202ENST00000357250 KIR2DL5BQ8NHK3 375 aa8.7□□□□□ -1.02
COL9A1-202ENST00000357250 HILS1P60008 231 aa8.7□□□□□ -1.02
COL9A1-202ENST00000357250 C10orf99Q6UWK7 81 aa8.7□□□□□ -1.02
COL9A1-202ENST00000357250 UQCRQO14949 82 aa8.7□□□□□ -1.02
COL9A1-202ENST00000357250 ZNF702PQ9H963 129 aa8.7□□□□□ -1.02
COL9A1-202ENST00000357250 MAPKAPK5-AS1Q8N8E1 139 aa8.7□□□□□ -1.02
COL9A1-202ENST00000357250 EXPH5Q8NEV8 1989 aa8.69□□□□□ -1.02
COL9A1-202ENST00000357250 TSHBP01222 138 aa8.69□□□□□ -1.02
COL9A1-202ENST00000357250 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
COL9A1-202ENST00000357250 ATG2AQ2TAZ0 1938 aa8.69□□□□□ -1.02
COL9A1-202ENST00000357250 ANKRD17O75179 2603 aaKnown RBP8.69□□□□□ -1.02
COL9A1-202ENST00000357250 IMUPQ9GZP8 106 aa8.69□□□□□ -1.02
COL9A1-202ENST00000357250 TRIAP1O43715 76 aa8.69□□□□□ -1.02
COL9A1-202ENST00000357250 BRI3O95415 125 aa8.68□□□□□ -1.02
COL9A1-202ENST00000357250 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
COL9A1-202ENST00000357250 CRIP2P52943 208 aaPredicted RBP8.68□□□□□ -1.02
COL9A1-202ENST00000357250 NDUFV3P56181 108 aaKnown RBP8.68□□□□□ -1.02
COL9A1-202ENST00000357250 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 1320.5 ms