RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 LINC00694P0DN24 101 aa13.79□□□□□ -0.2
LYSMD4-202ENST00000344791 C1orf158Q8N1D5 194 aa13.79□□□□□ -0.2
LYSMD4-202ENST00000344791 VSIG2Q96IQ7 327 aa13.78□□□□□ -0.2
LYSMD4-202ENST00000344791 SPATA25Q9BR10 227 aa13.78□□□□□ -0.2
LYSMD4-202ENST00000344791 ESM1Q9NQ30 184 aa13.78□□□□□ -0.2
LYSMD4-202ENST00000344791 TRBV20-1A0A075B6N2 111 aa13.78□□□□□ -0.2
LYSMD4-202ENST00000344791 TRAV13-1A0A0B4J241 112 aa13.78□□□□□ -0.2
LYSMD4-202ENST00000344791 LITAFQ99732 161 aa13.78□□□□□ -0.2
LYSMD4-202ENST00000344791 A8MTW9 85 aa13.77□□□□□ -0.2
LYSMD4-202ENST00000344791 COX6A2Q02221 97 aa13.77□□□□□ -0.2
LYSMD4-202ENST00000344791 CITED2Q99967 270 aaPredicted RBP13.77□□□□□ -0.2
LYSMD4-202ENST00000344791 CCL24O00175 119 aa13.77□□□□□ -0.21
LYSMD4-202ENST00000344791 TEN1Q86WV5 123 aa13.77□□□□□ -0.21
LYSMD4-202ENST00000344791 KRTAP1-3Q8IUG1 177 aa13.77□□□□□ -0.21
LYSMD4-202ENST00000344791 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
LYSMD4-202ENST00000344791 SLC25A20O43772 301 aa13.77□□□□□ -0.21
LYSMD4-202ENST00000344791 GAGE12JA6NER3 117 aa13.76□□□□□ -0.21
LYSMD4-202ENST00000344791 PLA2G2AP14555 144 aa13.76□□□□□ -0.21
LYSMD4-202ENST00000344791 GAGE4Q13068 117 aa13.76□□□□□ -0.21
LYSMD4-202ENST00000344791 GAGE5Q13069 117 aa13.76□□□□□ -0.21
LYSMD4-202ENST00000344791 TINCRA0A1B0GVN0 87 aa13.76□□□□□ -0.21
LYSMD4-202ENST00000344791 NOP10Q9NPE3 64 aaKnown RBP13.76□□□□□ -0.21
LYSMD4-202ENST00000344791 NBEAL2Q6ZNJ1 2754 aa13.76□□□□□ -0.21
LYSMD4-202ENST00000344791 RPL35AP18077 110 aaKnown RBP13.75□□□□□ -0.21
LYSMD4-202ENST00000344791 NOTCH2Q04721 2471 aa13.75□□□□□ -0.21
LYSMD4-202ENST00000344791 TRIAP1O43715 76 aa13.75□□□□□ -0.21
LYSMD4-202ENST00000344791 RS1O15537 224 aa13.74□□□□□ -0.21
LYSMD4-202ENST00000344791 EDA2RQ9HAV5 297 aa13.74□□□□□ -0.21
LYSMD4-202ENST00000344791 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.74□□□□□ -0.21
LYSMD4-202ENST00000344791 A0A0B4J2C4 111 aa13.74□□□□□ -0.21
LYSMD4-202ENST00000344791 PPDPFLQ8WWR9 84 aa13.73□□□□□ -0.21
LYSMD4-202ENST00000344791 CDIP1Q9H305 208 aa13.73□□□□□ -0.21
LYSMD4-202ENST00000344791 IGKV3OR2-268A0A0C4DH90 116 aa13.73□□□□□ -0.21
LYSMD4-202ENST00000344791 MT-ATP8P03928 68 aa13.73□□□□□ -0.21
LYSMD4-202ENST00000344791 BEAN1Q3B7T3 259 aa13.72□□□□□ -0.21
LYSMD4-202ENST00000344791 TMEM101Q96IK0 257 aa13.72□□□□□ -0.21
LYSMD4-202ENST00000344791 GCN1Q92616 2671 aaKnown RBP13.72□□□□□ -0.21
LYSMD4-202ENST00000344791 ATP6V0E2Q8NHE4 81 aa13.71□□□□□ -0.22
LYSMD4-202ENST00000344791 CLEC2BQ92478 149 aa13.71□□□□□ -0.22
LYSMD4-202ENST00000344791 LOC100131303A0A0U1RQF7 123 aa13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 GAGE7O76087 117 aa13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 GAGE12FP0CL80 117 aa13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 GAGE12GP0CL81 117 aa13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 GAGE12IP0CL82 117 aa13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 Q9H8V8 135 aa13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 XGP55808 180 aa13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 MIAQ16674 131 aa13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 NTN5Q8WTR8 489 aaPredicted RBP13.7□□□□□ -0.22
LYSMD4-202ENST00000344791 NTM-AS1Q6ZSK4 140 aa13.69□□□□□ -0.22
LYSMD4-202ENST00000344791 RPL36AP83881 106 aaKnown RBP13.69□□□□□ -0.22
LYSMD4-202ENST00000344791 RPL36ALQ969Q0 106 aaKnown RBP13.69□□□□□ -0.22
LYSMD4-202ENST00000344791 DNAJC30Q96LL9 226 aa13.69□□□□□ -0.22
LYSMD4-202ENST00000344791 TRGV2A0A075B6R0 118 aa13.69□□□□□ -0.22
LYSMD4-202ENST00000344791 ZFAND6Q6FIF0 208 aa13.69□□□□□ -0.22
LYSMD4-202ENST00000344791 LINC00242Q5T6M2 205 aa13.68□□□□□ -0.22
LYSMD4-202ENST00000344791 LRRC75A-AS1Q8N1F1 130 aa13.68□□□□□ -0.22
LYSMD4-202ENST00000344791 ICOSQ9Y6W8 199 aa13.68□□□□□ -0.22
LYSMD4-202ENST00000344791 K7EQD1 137 aa13.68□□□□□ -0.22
LYSMD4-202ENST00000344791 CRYBA4P53673 196 aa13.68□□□□□ -0.22
LYSMD4-202ENST00000344791 LINC01620Q4KN68 170 aa13.68□□□□□ -0.22
LYSMD4-202ENST00000344791 ATXN8Q156A1 80 aa13.67□□□□□ -0.22
LYSMD4-202ENST00000344791 TEX49A0A1B0GTD5 131 aa13.67□□□□□ -0.22
LYSMD4-202ENST00000344791 RPL13AP40429 203 aaKnown RBP13.67□□□□□ -0.22
LYSMD4-202ENST00000344791 PIK3CD-AS1Q5SR53 167 aa13.67□□□□□ -0.22
LYSMD4-202ENST00000344791 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
LYSMD4-202ENST00000344791 HELZ2Q9BYK8 2649 aaKnown RBP13.66□□□□□ -0.22
LYSMD4-202ENST00000344791 HIVEP2P31629 2446 aa13.65□□□□□ -0.22
LYSMD4-202ENST00000344791 SBSPONQ8IVN8 264 aa13.65□□□□□ -0.22
LYSMD4-202ENST00000344791 SPANXDQ9BXN6 97 aa13.65□□□□□ -0.22
LYSMD4-202ENST00000344791 SPANXCQ9NY87 97 aa13.65□□□□□ -0.22
LYSMD4-202ENST00000344791 FASNP49327 2511 aaKnown RBP13.65□□□□□ -0.22
LYSMD4-202ENST00000344791 MEIG1Q5JSS6 88 aa13.65□□□□□ -0.22
LYSMD4-202ENST00000344791 LINC01006Q8NI28 216 aa13.65□□□□□ -0.22
LYSMD4-202ENST00000344791 CIDEAO60543 219 aa13.64□□□□□ -0.23
LYSMD4-202ENST00000344791 UBE2L6O14933 153 aa13.63□□□□□ -0.23
LYSMD4-202ENST00000344791 PRIMA1Q86XR5 153 aa13.63□□□□□ -0.23
LYSMD4-202ENST00000344791 TRBV30A0A0K0K1B3 111 aa13.62□□□□□ -0.23
LYSMD4-202ENST00000344791 GIG44P09565 113 aaPredicted RBP13.62□□□□□ -0.23
LYSMD4-202ENST00000344791 HERVK_113P63121 156 aa13.62□□□□□ -0.23
LYSMD4-202ENST00000344791 PDZD2O15018 2839 aa13.62□□□□□ -0.23
LYSMD4-202ENST00000344791 SMIM1B2RUZ4 78 aa13.61□□□□□ -0.23
LYSMD4-202ENST00000344791 TOMM7Q9P0U1 55 aa13.61□□□□□ -0.23
LYSMD4-202ENST00000344791 NDUFA1O15239 70 aa13.61□□□□□ -0.23
LYSMD4-202ENST00000344791 TIRAPP58753 221 aa13.61□□□□□ -0.23
LYSMD4-202ENST00000344791 CIRBPQ14011 172 aaKnown RBP13.61□□□□□ -0.23
LYSMD4-202ENST00000344791 C2orf82Q6UX34 121 aa13.61□□□□□ -0.23
LYSMD4-202ENST00000344791 TRAV25A0A0B4J276 109 aa13.6□□□□□ -0.23
LYSMD4-202ENST00000344791 COX6CP09669 75 aa13.6□□□□□ -0.23
LYSMD4-202ENST00000344791 GAGE6Q13070 117 aa13.6□□□□□ -0.23
LYSMD4-202ENST00000344791 IL17DQ8TAD2 202 aa13.6□□□□□ -0.23
LYSMD4-202ENST00000344791 CKS1BP61024 79 aa13.6□□□□□ -0.23
LYSMD4-202ENST00000344791 TMEM86BQ8N661 226 aa13.6□□□□□ -0.23
LYSMD4-202ENST00000344791 TRAV4A0A0B4J268 109 aa13.59□□□□□ -0.23
LYSMD4-202ENST00000344791 TRGV4A0A0C4DH28 118 aa13.59□□□□□ -0.23
LYSMD4-202ENST00000344791 VWFP04275 2813 aa13.59□□□□□ -0.23
LYSMD4-202ENST00000344791 SCGB1A1P11684 91 aa13.59□□□□□ -0.23
LYSMD4-202ENST00000344791 LINC00308Q8TCZ7 52 aa13.59□□□□□ -0.23
LYSMD4-202ENST00000344791 CDC42SE2Q9NRR3 84 aa13.58□□□□□ -0.23
LYSMD4-202ENST00000344791 IGLV5-45A0A087WSX0 123 aa13.58□□□□□ -0.24
LYSMD4-202ENST00000344791 DAZ2Q13117 558 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms