RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 ZNF22P17026 224 aaPredicted RBP11.52□□□□□ -0.57
CARMIL3-201ENST00000342740 LINC00269Q8N2A0 174 aa11.52□□□□□ -0.57
CARMIL3-201ENST00000342740 TNRC6BQ9UPQ9 1833 aaKnown RBP11.52□□□□□ -0.57
CARMIL3-201ENST00000342740 IGKV2D-26A0A0A0MRZ7 120 aa11.52□□□□□ -0.57
CARMIL3-201ENST00000342740 WFDC2Q14508 124 aa11.52□□□□□ -0.57
CARMIL3-201ENST00000342740 LINC01620Q4KN68 170 aa11.52□□□□□ -0.57
CARMIL3-201ENST00000342740 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.57
CARMIL3-201ENST00000342740 TRBV6-4A0A1B0GX49 114 aa11.51□□□□□ -0.57
CARMIL3-201ENST00000342740 C9orf85Q96MD7 179 aa11.51□□□□□ -0.57
CARMIL3-201ENST00000342740 A0A0J9YXY3 114 aa11.51□□□□□ -0.57
CARMIL3-201ENST00000342740 CDK2AP2O75956 126 aa11.51□□□□□ -0.57
CARMIL3-201ENST00000342740 NFE4Q86UQ8 179 aa11.51□□□□□ -0.57
CARMIL3-201ENST00000342740 CRYBA4P53673 196 aa11.5□□□□□ -0.57
CARMIL3-201ENST00000342740 POLR2KP53803 58 aaKnown RBP11.5□□□□□ -0.57
CARMIL3-201ENST00000342740 MKI67P46013 3256 aaKnown RBP11.5□□□□□ -0.57
CARMIL3-201ENST00000342740 MIFP14174 115 aa11.49□□□□□ -0.57
CARMIL3-201ENST00000342740 BRI3O95415 125 aa11.49□□□□□ -0.57
CARMIL3-201ENST00000342740 TRBV6-8A0A0A6YYG3 113 aa11.49□□□□□ -0.57
CARMIL3-201ENST00000342740 REG3AQ06141 175 aa11.49□□□□□ -0.57
CARMIL3-201ENST00000342740 Q8N976 141 aa11.49□□□□□ -0.57
CARMIL3-201ENST00000342740 ODF3L2Q3SX64 289 aa11.48□□□□□ -0.57
CARMIL3-201ENST00000342740 MIAQ16674 131 aa11.48□□□□□ -0.57
CARMIL3-201ENST00000342740 FAM110AQ9BQ89 295 aa11.48□□□□□ -0.57
CARMIL3-201ENST00000342740 LAMA3Q16787 3333 aa11.48□□□□□ -0.57
CARMIL3-201ENST00000342740 ETDCA0A1B0GVM5 59 aa11.48□□□□□ -0.57
CARMIL3-201ENST00000342740 MAPKAPK5-AS1Q8N8E1 139 aa11.48□□□□□ -0.57
CARMIL3-201ENST00000342740 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
CARMIL3-201ENST00000342740 DEFB105AQ8NG35 78 aa11.47□□□□□ -0.57
CARMIL3-201ENST00000342740 LINC00310P59036 64 aa11.47□□□□□ -0.57
CARMIL3-201ENST00000342740 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.47□□□□□ -0.57
CARMIL3-201ENST00000342740 TSHBP01222 138 aa11.47□□□□□ -0.57
CARMIL3-201ENST00000342740 TEN1Q86WV5 123 aa11.47□□□□□ -0.57
CARMIL3-201ENST00000342740 TMEM223A0PJW6 202 aa11.46□□□□□ -0.57
CARMIL3-201ENST00000342740 PYGO1Q9Y3Y4 419 aa11.46□□□□□ -0.57
CARMIL3-201ENST00000342740 ZNF580Q9UK33 172 aa11.46□□□□□ -0.57
CARMIL3-201ENST00000342740 DEFB131BA0A096LNP1 70 aa11.46□□□□□ -0.58
CARMIL3-201ENST00000342740 H7C423 109 aa11.46□□□□□ -0.58
CARMIL3-201ENST00000342740 TM2D2Q9BX73 214 aa11.45□□□□□ -0.58
CARMIL3-201ENST00000342740 NCR3O14931 201 aa11.45□□□□□ -0.58
CARMIL3-201ENST00000342740 CLEC2BQ92478 149 aa11.45□□□□□ -0.58
CARMIL3-201ENST00000342740 LECT2O14960 151 aa11.45□□□□□ -0.58
CARMIL3-201ENST00000342740 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
CARMIL3-201ENST00000342740 NDUFA7O95182 113 aa11.44□□□□□ -0.58
CARMIL3-201ENST00000342740 IGHV4-28A0A0C4DH34 117 aa11.44□□□□□ -0.58
CARMIL3-201ENST00000342740 TET2Q6N021 2002 aaPredicted RBP11.43□□□□□ -0.58
CARMIL3-201ENST00000342740 TIRAPP58753 221 aa11.43□□□□□ -0.58
CARMIL3-201ENST00000342740 HIGD2BQ4VC39 106 aa11.43□□□□□ -0.58
CARMIL3-201ENST00000342740 COX8CQ7Z4L0 72 aa11.43□□□□□ -0.58
CARMIL3-201ENST00000342740 URB1-AS1Q96HZ7 61 aa11.42□□□□□ -0.58
CARMIL3-201ENST00000342740 SPANXCQ9NY87 97 aa11.42□□□□□ -0.58
CARMIL3-201ENST00000342740 KLK5Q9Y337 293 aaPredicted RBP11.42□□□□□ -0.58
CARMIL3-201ENST00000342740 RBX1P62877 108 aa11.42□□□□□ -0.58
CARMIL3-201ENST00000342740 LOC100131303A0A0U1RQF7 123 aa11.41□□□□□ -0.58
CARMIL3-201ENST00000342740 KIR2DL5BQ8NHK3 375 aa11.41□□□□□ -0.58
CARMIL3-201ENST00000342740 PIK3CD-AS1Q5SR53 167 aa11.41□□□□□ -0.58
CARMIL3-201ENST00000342740 TRBV10-2A0A0K0K1G8 114 aa11.4□□□□□ -0.58
CARMIL3-201ENST00000342740 RNASE8Q8TDE3 154 aaKnown RBP11.4□□□□□ -0.58
CARMIL3-201ENST00000342740 SPATA25Q9BR10 227 aa11.4□□□□□ -0.58
CARMIL3-201ENST00000342740 IGLV1-51P01701 117 aa11.4□□□□□ -0.58
CARMIL3-201ENST00000342740 BRCA2P51587 3418 aa11.4□□□□□ -0.58
CARMIL3-201ENST00000342740 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.58
CARMIL3-201ENST00000342740 A0A0B4J2C4 111 aa11.4□□□□□ -0.59
CARMIL3-201ENST00000342740 PTH2Q96A98 100 aa11.4□□□□□ -0.59
CARMIL3-201ENST00000342740 PCSK5Q92824 1860 aa11.4□□□□□ -0.59
CARMIL3-201ENST00000342740 OXLD1Q5BKU9 147 aa11.39□□□□□ -0.59
CARMIL3-201ENST00000342740 RBMY1FQ15415 496 aaKnown RBP11.39□□□□□ -0.59
CARMIL3-201ENST00000342740 A8MZ25 164 aa11.39□□□□□ -0.59
CARMIL3-201ENST00000342740 H3BT86 120 aa11.39□□□□□ -0.59
CARMIL3-201ENST00000342740 ACYP1P07311 99 aa11.38□□□□□ -0.59
CARMIL3-201ENST00000342740 UFSP1Q6NVU6 142 aa11.38□□□□□ -0.59
CARMIL3-201ENST00000342740 UBE2D4Q9Y2X8 147 aa11.38□□□□□ -0.59
CARMIL3-201ENST00000342740 DIRC1Q969H9 104 aa11.38□□□□□ -0.59
CARMIL3-201ENST00000342740 TCL1BO95988 128 aa11.37□□□□□ -0.59
CARMIL3-201ENST00000342740 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
CARMIL3-201ENST00000342740 FOXI1Q12951 378 aa11.37□□□□□ -0.59
CARMIL3-201ENST00000342740 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
CARMIL3-201ENST00000342740 C9orf153Q5TBE3 101 aa11.36□□□□□ -0.59
CARMIL3-201ENST00000342740 C2orf91Q6ZV80 131 aa11.36□□□□□ -0.59
CARMIL3-201ENST00000342740 IBA57-AS1B1ANH7 110 aa11.36□□□□□ -0.59
CARMIL3-201ENST00000342740 PTPRBP23467 1997 aa11.35□□□□□ -0.59
CARMIL3-201ENST00000342740 HECTD1Q9ULT8 2610 aa11.35□□□□□ -0.59
CARMIL3-201ENST00000342740 IGIPA6NJ69 53 aa11.35□□□□□ -0.59
CARMIL3-201ENST00000342740 IGHV4-30-4P0DP06 118 aa11.35□□□□□ -0.59
CARMIL3-201ENST00000342740 UBE2D3P61077 147 aa11.35□□□□□ -0.59
CARMIL3-201ENST00000342740 UBE2D2P62837 147 aa11.35□□□□□ -0.59
CARMIL3-201ENST00000342740 FUSP35637 526 aaKnown RBP eCLIP11.34□□□□□ -0.59
CARMIL3-201ENST00000342740 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
CARMIL3-201ENST00000342740 TRANK1O15050 2925 aa11.34□□□□□ -0.59
CARMIL3-201ENST00000342740 hADV29S1A0JD25 119 aa11.34□□□□□ -0.59
CARMIL3-201ENST00000342740 MRPS36P82909 103 aaKnown RBP11.34□□□□□ -0.59
CARMIL3-201ENST00000342740 SPANXDQ9BXN6 97 aa11.34□□□□□ -0.59
CARMIL3-201ENST00000342740 C16orf95Q9H693 158 aa11.34□□□□□ -0.59
CARMIL3-201ENST00000342740 KPRPQ5T749 579 aaPredicted RBP11.33□□□□□ -0.6
CARMIL3-201ENST00000342740 JMJD7-PLA2G4BH0Y9G9 81 aa11.33□□□□□ -0.6
CARMIL3-201ENST00000342740 AGRNO00468 2067 aa11.33□□□□□ -0.6
CARMIL3-201ENST00000342740 IL17DQ8TAD2 202 aa11.32□□□□□ -0.6
CARMIL3-201ENST00000342740 CITED1Q99966 193 aa11.32□□□□□ -0.6
CARMIL3-201ENST00000342740 IGKV2-24A0A0C4DH68 120 aa11.31□□□□□ -0.6
CARMIL3-201ENST00000342740 F8P00451 2351 aa11.31□□□□□ -0.6
CARMIL3-201ENST00000342740 TRACP01848 142 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms