RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 LINC00643Q86TS7 51 aa11.63□□□□□ -0.55
HDAC5-202ENST00000336057 WFDC11Q8NEX6 87 aa11.63□□□□□ -0.55
HDAC5-202ENST00000336057 ETDCA0A1B0GVM5 59 aa11.62□□□□□ -0.55
HDAC5-202ENST00000336057 TMEM256-PLSCR3K7ERE1 68 aa11.62□□□□□ -0.55
HDAC5-202ENST00000336057 TRAV26-1A0A087WT03 109 aa11.61□□□□□ -0.55
HDAC5-202ENST00000336057 MRGPRG-AS1Q2M3A8 158 aa11.61□□□□□ -0.55
HDAC5-202ENST00000336057 hADV29S1A0JD25 119 aa11.61□□□□□ -0.55
HDAC5-202ENST00000336057 C14orf132Q9NPU4 83 aa11.61□□□□□ -0.55
HDAC5-202ENST00000336057 A8MZ25 164 aa11.6□□□□□ -0.55
HDAC5-202ENST00000336057 FUSP35637 526 aaKnown RBP eCLIP11.6□□□□□ -0.55
HDAC5-202ENST00000336057 A0A096LNJ9 63 aa11.6□□□□□ -0.55
HDAC5-202ENST00000336057 IGIPA6NJ69 53 aa11.6□□□□□ -0.55
HDAC5-202ENST00000336057 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
HDAC5-202ENST00000336057 RBM3P98179 157 aaKnown RBP11.6□□□□□ -0.55
HDAC5-202ENST00000336057 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
HDAC5-202ENST00000336057 MRAPQ8TCY5 172 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 DIRC1Q969H9 104 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 CEP350Q5VT06 3117 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 UBE2BP63146 152 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 FAM222AQ5U5X8 452 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 SMIM20Q8N5G0 67 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
HDAC5-202ENST00000336057 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 TIMM17BO60830 172 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 CRIP2P52943 208 aaPredicted RBP11.59□□□□□ -0.55
HDAC5-202ENST00000336057 PIK3CD-AS1Q5SR53 167 aa11.59□□□□□ -0.55
HDAC5-202ENST00000336057 TRBV6-8A0A0A6YYG3 113 aa11.58□□□□□ -0.56
HDAC5-202ENST00000336057 IBA57-AS1B1ANH7 110 aa11.58□□□□□ -0.56
HDAC5-202ENST00000336057 AVPP01185 164 aa11.58□□□□□ -0.56
HDAC5-202ENST00000336057 CCL18P55774 89 aa11.58□□□□□ -0.56
HDAC5-202ENST00000336057 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
HDAC5-202ENST00000336057 REG3AQ06141 175 aa11.58□□□□□ -0.56
HDAC5-202ENST00000336057 TET2Q6N021 2002 aaPredicted RBP11.57□□□□□ -0.56
HDAC5-202ENST00000336057 C18orf65Q6ZTR6 163 aa11.57□□□□□ -0.56
HDAC5-202ENST00000336057 RNF183Q96D59 192 aa11.57□□□□□ -0.56
HDAC5-202ENST00000336057 TLN2Q9Y4G6 2542 aa11.57□□□□□ -0.56
HDAC5-202ENST00000336057 PRM2P04554 102 aa11.57□□□□□ -0.56
HDAC5-202ENST00000336057 A0A1W2PPR1 153 aa11.56□□□□□ -0.56
HDAC5-202ENST00000336057 LYRM9A8MSI8 78 aa11.56□□□□□ -0.56
HDAC5-202ENST00000336057 NDUFV3P56181 108 aaKnown RBP11.56□□□□□ -0.56
HDAC5-202ENST00000336057 UFSP1Q6NVU6 142 aa11.55□□□□□ -0.56
HDAC5-202ENST00000336057 CHCHD10Q8WYQ3 142 aaPredicted RBP11.55□□□□□ -0.56
HDAC5-202ENST00000336057 ADAMTS20P59510 1910 aa11.55□□□□□ -0.56
HDAC5-202ENST00000336057 RAI1Q7Z5J4 1906 aaPredicted RBP11.55□□□□□ -0.56
HDAC5-202ENST00000336057 EDN2P20800 178 aa11.55□□□□□ -0.56
HDAC5-202ENST00000336057 MRPS36P82909 103 aaKnown RBP11.54□□□□□ -0.56
HDAC5-202ENST00000336057 NREPQ16612 68 aa11.54□□□□□ -0.56
HDAC5-202ENST00000336057 USP9YO00507 2555 aaPredicted RBP11.54□□□□□ -0.56
HDAC5-202ENST00000336057 UTRNP46939 3433 aa11.53□□□□□ -0.56
HDAC5-202ENST00000336057 COL4A2P08572 1712 aa11.53□□□□□ -0.56
HDAC5-202ENST00000336057 PDE6GP18545 87 aa11.53□□□□□ -0.56
HDAC5-202ENST00000336057 UBE2D1P51668 147 aa11.52□□□□□ -0.56
HDAC5-202ENST00000336057 IGLV2-18A0A075B6J9 118 aa11.52□□□□□ -0.57
HDAC5-202ENST00000336057 IGHV4-28A0A0C4DH34 117 aa11.52□□□□□ -0.57
HDAC5-202ENST00000336057 BRI3O95415 125 aa11.51□□□□□ -0.57
HDAC5-202ENST00000336057 SPATA25Q9BR10 227 aa11.51□□□□□ -0.57
HDAC5-202ENST00000336057 PRRC2AP48634 2157 aaKnown RBP11.51□□□□□ -0.57
HDAC5-202ENST00000336057 COX7BP24311 80 aa11.51□□□□□ -0.57
HDAC5-202ENST00000336057 IGLV4-69A0A075B6H9 119 aa11.51□□□□□ -0.57
HDAC5-202ENST00000336057 LST1O00453 97 aa11.51□□□□□ -0.57
HDAC5-202ENST00000336057 LINC01006Q8NI28 216 aa11.49□□□□□ -0.57
HDAC5-202ENST00000336057 HIGD2BQ4VC39 106 aa11.49□□□□□ -0.57
HDAC5-202ENST00000336057 ZNF843Q8N446 348 aa11.49□□□□□ -0.57
HDAC5-202ENST00000336057 POM121L12Q8N7R1 296 aa11.49□□□□□ -0.57
HDAC5-202ENST00000336057 SETD2Q9BYW2 2564 aaPredicted RBP11.48□□□□□ -0.57
HDAC5-202ENST00000336057 SLPIP03973 132 aa11.48□□□□□ -0.57
HDAC5-202ENST00000336057 WFDC10AQ9H1F0 79 aa11.48□□□□□ -0.57
HDAC5-202ENST00000336057 LINC00482Q8N8I6 264 aa11.47□□□□□ -0.57
HDAC5-202ENST00000336057 LOC100131303A0A0U1RQF7 123 aa11.47□□□□□ -0.57
HDAC5-202ENST00000336057 ABCA12Q86UK0 2595 aa11.47□□□□□ -0.57
HDAC5-202ENST00000336057 J3KT08 172 aa11.46□□□□□ -0.57
HDAC5-202ENST00000336057 SDIM1Q6ZPB5 146 aa11.46□□□□□ -0.57
HDAC5-202ENST00000336057 UBE2D3P61077 147 aa11.46□□□□□ -0.57
HDAC5-202ENST00000336057 TMEM258P61165 79 aa11.46□□□□□ -0.57
HDAC5-202ENST00000336057 UBE2D2P62837 147 aa11.46□□□□□ -0.57
HDAC5-202ENST00000336057 BBC3Q96PG8 261 aaPredicted RBP11.46□□□□□ -0.57
HDAC5-202ENST00000336057 TSPEAR-AS2P59090 65 aa11.45□□□□□ -0.58
HDAC5-202ENST00000336057 CDC42SE2Q9NRR3 84 aa11.45□□□□□ -0.58
HDAC5-202ENST00000336057 PKIGQ9Y2B9 76 aa11.45□□□□□ -0.58
HDAC5-202ENST00000336057 XGP55808 180 aa11.45□□□□□ -0.58
HDAC5-202ENST00000336057 ODF3L2Q3SX64 289 aa11.45□□□□□ -0.58
HDAC5-202ENST00000336057 ZNF580Q9UK33 172 aa11.45□□□□□ -0.58
HDAC5-202ENST00000336057 MIFP14174 115 aa11.44□□□□□ -0.58
HDAC5-202ENST00000336057 LINC00242Q5T6M2 205 aa11.44□□□□□ -0.58
HDAC5-202ENST00000336057 LINC00959A0A1B0GUT2 108 aa11.43□□□□□ -0.58
HDAC5-202ENST00000336057 UQCRQO14949 82 aa11.43□□□□□ -0.58
HDAC5-202ENST00000336057 TRAV23DV6A0A075B6W5 121 aa11.43□□□□□ -0.58
HDAC5-202ENST00000336057 C6orf99Q4VX62 202 aa11.43□□□□□ -0.58
HDAC5-202ENST00000336057 CD164L2Q6UWJ8 174 aa11.43□□□□□ -0.58
HDAC5-202ENST00000336057 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
HDAC5-202ENST00000336057 UPK3BQ9BT76 320 aa11.42□□□□□ -0.58
HDAC5-202ENST00000336057 CHD8Q9HCK8 2581 aa11.42□□□□□ -0.58
HDAC5-202ENST00000336057 CHCHD7Q9BUK0 85 aa11.42□□□□□ -0.58
HDAC5-202ENST00000336057 XAGE1AQ9HD64 81 aa11.41□□□□□ -0.58
HDAC5-202ENST00000336057 SPTBN4Q9H254 2564 aa11.41□□□□□ -0.58
HDAC5-202ENST00000336057 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
HDAC5-202ENST00000336057 ATP5EP2Q5VTU8 51 aa11.4□□□□□ -0.58
HDAC5-202ENST00000336057 AMELXQ99217 191 aa11.4□□□□□ -0.58
HDAC5-202ENST00000336057 SMIM11BQ8TCY0 68 aa11.4□□□□□ -0.59
HDAC5-202ENST00000336057 NDUFA7O95182 113 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms