RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
TRAPPC11-201ENST00000334690 NREPQ16612 68 aa12.67□□□□□ -0.38
TRAPPC11-201ENST00000334690 UFSP1Q6NVU6 142 aa12.67□□□□□ -0.38
TRAPPC11-201ENST00000334690 LINC00308Q8TCZ7 52 aa12.67□□□□□ -0.38
TRAPPC11-201ENST00000334690 IBA57-AS1B1ANH7 110 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 DCANP1Q8TF63 244 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 C9orf85Q96MD7 179 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 ZNF702PQ9H963 129 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 SS18L2Q9UHA2 77 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 COL5A1P20908 1838 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 EML5Q05BV3 1969 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 CRYGDP07320 174 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 TRBV30A0A0K0K1B3 111 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 TSHBP01222 138 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 CDSNQ15517 529 aa12.66□□□□□ -0.38
TRAPPC11-201ENST00000334690 LINC00269Q8N2A0 174 aa12.65□□□□□ -0.38
TRAPPC11-201ENST00000334690 TRAV26-1A0A087WT03 109 aa12.65□□□□□ -0.38
TRAPPC11-201ENST00000334690 REG3AQ06141 175 aa12.65□□□□□ -0.38
TRAPPC11-201ENST00000334690 TRBV6-8A0A0A6YYG3 113 aa12.65□□□□□ -0.38
TRAPPC11-201ENST00000334690 SPTBN4Q9H254 2564 aa12.65□□□□□ -0.39
TRAPPC11-201ENST00000334690 CPAMD8Q8IZJ3 1885 aa12.64□□□□□ -0.39
TRAPPC11-201ENST00000334690 CHD8Q9HCK8 2581 aa12.64□□□□□ -0.39
TRAPPC11-201ENST00000334690 F8W735 103 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC11-201ENST00000334690 GAS8-AS1O95177 125 aa12.64□□□□□ -0.39
TRAPPC11-201ENST00000334690 URB1-AS1Q96HZ7 61 aa12.64□□□□□ -0.39
TRAPPC11-201ENST00000334690 TIMM17BO60830 172 aa12.64□□□□□ -0.39
TRAPPC11-201ENST00000334690 PROK1P58294 105 aa12.64□□□□□ -0.39
TRAPPC11-201ENST00000334690 PIK3CD-AS1Q5SR53 167 aa12.64□□□□□ -0.39
TRAPPC11-201ENST00000334690 Q8N976 141 aa12.63□□□□□ -0.39
TRAPPC11-201ENST00000334690 PKD1L2Q7Z442 2459 aa12.63□□□□□ -0.39
TRAPPC11-201ENST00000334690 Q6ZS46 218 aa12.62□□□□□ -0.39
TRAPPC11-201ENST00000334690 COX8CQ7Z4L0 72 aa12.62□□□□□ -0.39
TRAPPC11-201ENST00000334690 TRIAP1O43715 76 aa12.62□□□□□ -0.39
TRAPPC11-201ENST00000334690 TEX49A0A1B0GTD5 131 aa12.62□□□□□ -0.39
TRAPPC11-201ENST00000334690 CHCHD10Q8WYQ3 142 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC11-201ENST00000334690 TMEM258P61165 79 aa12.61□□□□□ -0.39
TRAPPC11-201ENST00000334690 CRIP2P52943 208 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC11-201ENST00000334690 C14orf132Q9NPU4 83 aa12.61□□□□□ -0.39
TRAPPC11-201ENST00000334690 COX7BP24311 80 aa12.61□□□□□ -0.39
TRAPPC11-201ENST00000334690 SMIM20Q8N5G0 67 aa12.61□□□□□ -0.39
TRAPPC11-201ENST00000334690 HIGD2BQ4VC39 106 aa12.6□□□□□ -0.39
TRAPPC11-201ENST00000334690 GOLGB1Q14789 3259 aaKnown RBP12.59□□□□□ -0.39
TRAPPC11-201ENST00000334690 MRPS36P82909 103 aaKnown RBP12.59□□□□□ -0.39
TRAPPC11-201ENST00000334690 RBX1P62877 108 aa12.59□□□□□ -0.39
TRAPPC11-201ENST00000334690 EXPH5Q8NEV8 1989 aa12.58□□□□□ -0.4
TRAPPC11-201ENST00000334690 LRRK2Q5S007 2527 aa12.58□□□□□ -0.4
TRAPPC11-201ENST00000334690 IGHV4-28A0A0C4DH34 117 aa12.57□□□□□ -0.4
TRAPPC11-201ENST00000334690 MIFP14174 115 aa12.57□□□□□ -0.4
TRAPPC11-201ENST00000334690 LINC01006Q8NI28 216 aa12.57□□□□□ -0.4
TRAPPC11-201ENST00000334690 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
TRAPPC11-201ENST00000334690 MT-ATP8P03928 68 aa12.57□□□□□ -0.4
TRAPPC11-201ENST00000334690 UBE2D4Q9Y2X8 147 aa12.56□□□□□ -0.4
TRAPPC11-201ENST00000334690 BRI3O95415 125 aa12.56□□□□□ -0.4
TRAPPC11-201ENST00000334690 MRGPRG-AS1Q2M3A8 158 aa12.56□□□□□ -0.4
TRAPPC11-201ENST00000334690 ZNF843Q8N446 348 aa12.56□□□□□ -0.4
TRAPPC11-201ENST00000334690 AVPP01185 164 aa12.55□□□□□ -0.4
TRAPPC11-201ENST00000334690 C11orf45Q8TAV5 145 aa12.55□□□□□ -0.4
TRAPPC11-201ENST00000334690 NDUFB1O75438 58 aa12.55□□□□□ -0.4
TRAPPC11-201ENST00000334690 NDUFV3P56181 108 aaKnown RBP12.53□□□□□ -0.4
TRAPPC11-201ENST00000334690 A8MZ25 164 aa12.53□□□□□ -0.4
TRAPPC11-201ENST00000334690 MP68P56378 58 aa12.52□□□□□ -0.4
TRAPPC11-201ENST00000334690 MTORP42345 2549 aa12.52□□□□□ -0.41
TRAPPC11-201ENST00000334690 J3KT08 172 aa12.52□□□□□ -0.41
TRAPPC11-201ENST00000334690 UBE2D1P51668 147 aa12.51□□□□□ -0.41
TRAPPC11-201ENST00000334690 ZNF580Q9UK33 172 aa12.51□□□□□ -0.41
TRAPPC11-201ENST00000334690 LST1O00453 97 aa12.51□□□□□ -0.41
TRAPPC11-201ENST00000334690 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
TRAPPC11-201ENST00000334690 A0A1W2PPR1 153 aa12.5□□□□□ -0.41
TRAPPC11-201ENST00000334690 UBE2AP49459 152 aa12.5□□□□□ -0.41
TRAPPC11-201ENST00000334690 LINC00482Q8N8I6 264 aa12.5□□□□□ -0.41
TRAPPC11-201ENST00000334690 RNF183Q96D59 192 aa12.5□□□□□ -0.41
TRAPPC11-201ENST00000334690 CD164L2Q6UWJ8 174 aa12.5□□□□□ -0.41
TRAPPC11-201ENST00000334690 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC11-201ENST00000334690 NDUFS5O43920 106 aa12.49□□□□□ -0.41
TRAPPC11-201ENST00000334690 INAFM1C9JVW0 142 aa12.49□□□□□ -0.41
TRAPPC11-201ENST00000334690 ATP5EP2Q5VTU8 51 aa12.49□□□□□ -0.41
TRAPPC11-201ENST00000334690 HILS1P60008 231 aa12.49□□□□□ -0.41
TRAPPC11-201ENST00000334690 DEFB131BA0A096LNP1 70 aa12.48□□□□□ -0.41
TRAPPC11-201ENST00000334690 A0A096LNJ9 63 aa12.48□□□□□ -0.41
TRAPPC11-201ENST00000334690 UBE2D3P61077 147 aa12.48□□□□□ -0.41
TRAPPC11-201ENST00000334690 UBE2D2P62837 147 aa12.48□□□□□ -0.41
TRAPPC11-201ENST00000334690 PRM2P04554 102 aa12.48□□□□□ -0.41
TRAPPC11-201ENST00000334690 C6orf99Q4VX62 202 aa12.48□□□□□ -0.41
TRAPPC11-201ENST00000334690 ODF3L2Q3SX64 289 aa12.47□□□□□ -0.41
TRAPPC11-201ENST00000334690 KIR2DL5BQ8NHK3 375 aa12.47□□□□□ -0.41
TRAPPC11-201ENST00000334690 KLK5Q9Y337 293 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC11-201ENST00000334690 C14orf177Q52M58 125 aa12.47□□□□□ -0.41
TRAPPC11-201ENST00000334690 CDC42SE2Q9NRR3 84 aa12.46□□□□□ -0.41
TRAPPC11-201ENST00000334690 LINC00959A0A1B0GUT2 108 aa12.46□□□□□ -0.41
TRAPPC11-201ENST00000334690 UQCRQO14949 82 aa12.46□□□□□ -0.41
TRAPPC11-201ENST00000334690 WFDC10AQ9H1F0 79 aa12.46□□□□□ -0.42
TRAPPC11-201ENST00000334690 XAGE1AQ9HD64 81 aa12.46□□□□□ -0.42
TRAPPC11-201ENST00000334690 BPY2O14599 106 aa12.45□□□□□ -0.42
TRAPPC11-201ENST00000334690 POM121L12Q8N7R1 296 aa12.45□□□□□ -0.42
TRAPPC11-201ENST00000334690 UPK3BQ9BT76 320 aa12.45□□□□□ -0.42
TRAPPC11-201ENST00000334690 SLPIP03973 132 aa12.45□□□□□ -0.42
TRAPPC11-201ENST00000334690 TRAV23DV6A0A075B6W5 121 aa12.44□□□□□ -0.42
TRAPPC11-201ENST00000334690 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
TRAPPC11-201ENST00000334690 LINC00242Q5T6M2 205 aa12.44□□□□□ -0.42
TRAPPC11-201ENST00000334690 SDIM1Q6ZPB5 146 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms