RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 LINC00643Q86TS7 51 aa7.6□□□□□ -1.19
CHD3-201ENST00000330494 H0YGX0 51 aa7.6□□□□□ -1.19
CHD3-201ENST00000330494 IGHV1-58A0A0C4DH39 117 aa7.6□□□□□ -1.19
CHD3-201ENST00000330494 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
CHD3-201ENST00000330494 UPK3BQ9BT76 320 aa7.6□□□□□ -1.19
CHD3-201ENST00000330494 H3BT86 120 aa7.6□□□□□ -1.19
CHD3-201ENST00000330494 CCDC179H3BU77 68 aa7.6□□□□□ -1.19
CHD3-201ENST00000330494 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.6□□□□□ -1.19
CHD3-201ENST00000330494 REG3AQ06141 175 aa7.6□□□□□ -1.19
CHD3-201ENST00000330494 IGLV2-18A0A075B6J9 118 aa7.59□□□□□ -1.19
CHD3-201ENST00000330494 A0A096LNI7 61 aa7.59□□□□□ -1.19
CHD3-201ENST00000330494 M0QXV9 152 aa7.59□□□□□ -1.19
CHD3-201ENST00000330494 CRYGDP07320 174 aa7.59□□□□□ -1.19
CHD3-201ENST00000330494 PLA2G2AP14555 144 aa7.59□□□□□ -1.19
CHD3-201ENST00000330494 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
CHD3-201ENST00000330494 NEXN-AS1Q8NBZ9 246 aa7.59□□□□□ -1.19
CHD3-201ENST00000330494 LOC100131303A0A0U1RQF7 123 aa7.59□□□□□ -1.2
CHD3-201ENST00000330494 AVPP01185 164 aa7.59□□□□□ -1.2
CHD3-201ENST00000330494 A0A1B0GXF2 115 aa7.58□□□□□ -1.2
CHD3-201ENST00000330494 M0R2N4 97 aa7.58□□□□□ -1.2
CHD3-201ENST00000330494 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
CHD3-201ENST00000330494 LINC01006Q8NI28 216 aa7.58□□□□□ -1.2
CHD3-201ENST00000330494 LINC00526Q96FQ7 95 aa7.58□□□□□ -1.2
CHD3-201ENST00000330494 IGKV2D-26A0A0A0MRZ7 120 aa7.58□□□□□ -1.2
CHD3-201ENST00000330494 CFAP126Q5VTH2 177 aa7.58□□□□□ -1.2
CHD3-201ENST00000330494 Q8N976 141 aa7.57□□□□□ -1.2
CHD3-201ENST00000330494 DIRC1Q969H9 104 aa7.57□□□□□ -1.2
CHD3-201ENST00000330494 CCDC168Q8NDH2 2452 aa7.57□□□□□ -1.2
CHD3-201ENST00000330494 BBC3Q96PG8 261 aaPredicted RBP7.57□□□□□ -1.2
CHD3-201ENST00000330494 CHCHD10Q8WYQ3 142 aaPredicted RBP7.57□□□□□ -1.2
CHD3-201ENST00000330494 CEP350Q5VT06 3117 aa7.57□□□□□ -1.2
CHD3-201ENST00000330494 EBI3Q14213 229 aa7.56□□□□□ -1.2
CHD3-201ENST00000330494 TRBV10-1A0A0K0K1A3 114 aa7.56□□□□□ -1.2
CHD3-201ENST00000330494 PRR9Q5T870 116 aa7.56□□□□□ -1.2
CHD3-201ENST00000330494 JMJD7-PLA2G4BH0Y9G9 81 aa7.56□□□□□ -1.2
CHD3-201ENST00000330494 NDUFA7O95182 113 aa7.56□□□□□ -1.2
CHD3-201ENST00000330494 ABCA2Q9BZC7 2435 aa7.56□□□□□ -1.2
CHD3-201ENST00000330494 CDKN2A-AS1Q9UH64 79 aa7.56□□□□□ -1.2
CHD3-201ENST00000330494 A8MZ25 164 aa7.55□□□□□ -1.2
CHD3-201ENST00000330494 CACNA1AO00555 2505 aa7.55□□□□□ -1.2
CHD3-201ENST00000330494 HILS1P60008 231 aa7.55□□□□□ -1.2
CHD3-201ENST00000330494 OXLD1Q5BKU9 147 aa7.55□□□□□ -1.2
CHD3-201ENST00000330494 LINC00694P0DN24 101 aa7.55□□□□□ -1.2
CHD3-201ENST00000330494 NCOR2Q9Y618 2525 aa7.55□□□□□ -1.2
CHD3-201ENST00000330494 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
CHD3-201ENST00000330494 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
CHD3-201ENST00000330494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.54□□□□□ -1.2
CHD3-201ENST00000330494 PIK3CD-AS1Q5SR53 167 aa7.54□□□□□ -1.2
CHD3-201ENST00000330494 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
CHD3-201ENST00000330494 SLPIP03973 132 aa7.54□□□□□ -1.2
CHD3-201ENST00000330494 MBD6Q96DN6 1003 aa7.54□□□□□ -1.2
CHD3-201ENST00000330494 DCANP1Q8TF63 244 aa7.54□□□□□ -1.2
CHD3-201ENST00000330494 RNF185Q96GF1 192 aa7.54□□□□□ -1.2
CHD3-201ENST00000330494 XAGE1AQ9HD64 81 aa7.54□□□□□ -1.2
CHD3-201ENST00000330494 IGLV4-3A0A075B6K6 122 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 ENHOQ6UWT2 76 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 ODF3Q96PU9 254 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 M0QY20 66 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 IGLV2-11P01706 119 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 MIAQ16674 131 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 GAS8-AS1O95177 125 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 CXCL5P42830 114 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 HRCT1Q6UXD1 115 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 FAM19A5Q7Z5A7 132 aaPredicted RBP7.53□□□□□ -1.2
CHD3-201ENST00000330494 Q8N6K4 173 aa7.53□□□□□ -1.2
CHD3-201ENST00000330494 TMEM256-PLSCR3K7ERE1 68 aa7.52□□□□□ -1.2
CHD3-201ENST00000330494 C5orf42Q9H799 3197 aa7.52□□□□□ -1.2
CHD3-201ENST00000330494 SNURFQ9Y675 71 aa7.52□□□□□ -1.21
CHD3-201ENST00000330494 FSTL3O95633 263 aa7.52□□□□□ -1.21
CHD3-201ENST00000330494 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.21
CHD3-201ENST00000330494 AGRNO00468 2067 aa7.52□□□□□ -1.21
CHD3-201ENST00000330494 TRBV6-8A0A0A6YYG3 113 aa7.52□□□□□ -1.21
CHD3-201ENST00000330494 H0Y9J4 135 aa7.52□□□□□ -1.21
CHD3-201ENST00000330494 SHISA2Q6UWI4 295 aa7.52□□□□□ -1.21
CHD3-201ENST00000330494 MAPKAPK5-AS1Q8N8E1 139 aa7.51□□□□□ -1.21
CHD3-201ENST00000330494 NDUFB1O75438 58 aa7.51□□□□□ -1.21
CHD3-201ENST00000330494 COX7BP24311 80 aa7.51□□□□□ -1.21
CHD3-201ENST00000330494 TIMM17BO60830 172 aa7.51□□□□□ -1.21
CHD3-201ENST00000330494 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
CHD3-201ENST00000330494 A0A087WZ39 114 aa7.51□□□□□ -1.21
CHD3-201ENST00000330494 A0A1W2PPR1 153 aa7.51□□□□□ -1.21
CHD3-201ENST00000330494 NANOS2P60321 138 aaKnown RBP7.51□□□□□ -1.21
CHD3-201ENST00000330494 SMIM9A6NGZ8 99 aa7.5□□□□□ -1.21
CHD3-201ENST00000330494 RETNQ9HD89 108 aa7.5□□□□□ -1.21
CHD3-201ENST00000330494 SEC61GP60059 68 aa7.5□□□□□ -1.21
CHD3-201ENST00000330494 TMEM223A0PJW6 202 aa7.49□□□□□ -1.21
CHD3-201ENST00000330494 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
CHD3-201ENST00000330494 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
CHD3-201ENST00000330494 FAM19A1Q7Z5A9 133 aa7.49□□□□□ -1.21
CHD3-201ENST00000330494 A0A0J9YWU9 116 aa7.49□□□□□ -1.21
CHD3-201ENST00000330494 MIFP14174 115 aa7.49□□□□□ -1.21
CHD3-201ENST00000330494 XGP55808 180 aa7.49□□□□□ -1.21
CHD3-201ENST00000330494 KPRPQ5T749 579 aaPredicted RBP7.49□□□□□ -1.21
CHD3-201ENST00000330494 B9D2Q9BPU9 175 aa7.49□□□□□ -1.21
CHD3-201ENST00000330494 IGLV1-40P01703 118 aa7.48□□□□□ -1.21
CHD3-201ENST00000330494 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
CHD3-201ENST00000330494 C10orf142B7Z368 130 aa7.48□□□□□ -1.21
CHD3-201ENST00000330494 H3BQ85 93 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms