RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 LITAFQ99732 161 aa12.63□□□□□ -0.39
PTP4A3-201ENST00000329397 IGHV3OR16-12A0A075B7B8 117 aa12.62□□□□□ -0.39
PTP4A3-201ENST00000329397 A0A096LNT2 108 aa12.62□□□□□ -0.39
PTP4A3-201ENST00000329397 NDUFA12Q9UI09 145 aa12.62□□□□□ -0.39
PTP4A3-201ENST00000329397 CHCHD7Q9BUK0 85 aa12.62□□□□□ -0.39
PTP4A3-201ENST00000329397 TRIAP1O43715 76 aa12.61□□□□□ -0.39
PTP4A3-201ENST00000329397 MRPS36P82909 103 aaKnown RBP12.61□□□□□ -0.39
PTP4A3-201ENST00000329397 C11orf44Q8N8P7 122 aa12.61□□□□□ -0.39
PTP4A3-201ENST00000329397 LINC01587Q99440 93 aa12.61□□□□□ -0.39
PTP4A3-201ENST00000329397 SBSPONQ8IVN8 264 aa12.61□□□□□ -0.39
PTP4A3-201ENST00000329397 SEC61GP60059 68 aa12.6□□□□□ -0.39
PTP4A3-201ENST00000329397 A0A0B4J2C4 111 aa12.6□□□□□ -0.39
PTP4A3-201ENST00000329397 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
PTP4A3-201ENST00000329397 KIR2DL5BQ8NHK3 375 aa12.6□□□□□ -0.39
PTP4A3-201ENST00000329397 NTN5Q8WTR8 489 aaPredicted RBP12.6□□□□□ -0.39
PTP4A3-201ENST00000329397 UBE2D4Q9Y2X8 147 aa12.6□□□□□ -0.39
PTP4A3-201ENST00000329397 SETXQ7Z333 2677 aaKnown RBP12.6□□□□□ -0.39
PTP4A3-201ENST00000329397 TMEM126AQ9H061 195 aa12.59□□□□□ -0.39
PTP4A3-201ENST00000329397 KRTAP10-9P60411 292 aa12.59□□□□□ -0.39
PTP4A3-201ENST00000329397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
PTP4A3-201ENST00000329397 XCL2Q9UBD3 114 aa12.59□□□□□ -0.39
PTP4A3-201ENST00000329397 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.39
PTP4A3-201ENST00000329397 Q6YL49 198 aa12.58□□□□□ -0.39
PTP4A3-201ENST00000329397 MTORP42345 2549 aa12.58□□□□□ -0.4
PTP4A3-201ENST00000329397 TMEM89A2RUT3 159 aa12.58□□□□□ -0.4
PTP4A3-201ENST00000329397 NDUFA7O95182 113 aa12.58□□□□□ -0.4
PTP4A3-201ENST00000329397 ZNF625Q96I27 306 aaPredicted RBP12.58□□□□□ -0.4
PTP4A3-201ENST00000329397 CDKN2A-AS1Q9UH64 79 aa12.58□□□□□ -0.4
PTP4A3-201ENST00000329397 PYGO1Q9Y3Y4 419 aa12.58□□□□□ -0.4
PTP4A3-201ENST00000329397 TEX49A0A1B0GTD5 131 aa12.58□□□□□ -0.4
PTP4A3-201ENST00000329397 MAP6D1Q9H9H5 199 aa12.58□□□□□ -0.4
PTP4A3-201ENST00000329397 ITPR3Q14573 2671 aa12.57□□□□□ -0.4
PTP4A3-201ENST00000329397 VSIG2Q96IQ7 327 aa12.57□□□□□ -0.4
PTP4A3-201ENST00000329397 ACANP16112 2415 aa12.57□□□□□ -0.4
PTP4A3-201ENST00000329397 ZNF415Q09FC8 603 aa12.57□□□□□ -0.4
PTP4A3-201ENST00000329397 CLEC2BQ92478 149 aa12.57□□□□□ -0.4
PTP4A3-201ENST00000329397 LINC01620Q4KN68 170 aa12.56□□□□□ -0.4
PTP4A3-201ENST00000329397 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.56□□□□□ -0.4
PTP4A3-201ENST00000329397 IGHV3-53P01767 116 aa12.56□□□□□ -0.4
PTP4A3-201ENST00000329397 C11orf72Q8NBR9 251 aa12.56□□□□□ -0.4
PTP4A3-201ENST00000329397 DYNLRB2Q8TF09 96 aa12.56□□□□□ -0.4
PTP4A3-201ENST00000329397 TTC32Q5I0X7 151 aa12.55□□□□□ -0.4
PTP4A3-201ENST00000329397 APCP25054 2843 aa12.55□□□□□ -0.4
PTP4A3-201ENST00000329397 IFITM1P13164 125 aa12.55□□□□□ -0.4
PTP4A3-201ENST00000329397 COX6A2Q02221 97 aa12.55□□□□□ -0.4
PTP4A3-201ENST00000329397 FLNAP21333 2647 aaKnown RBP12.55□□□□□ -0.4
PTP4A3-201ENST00000329397 IGHV4-31P0DP07 118 aa12.54□□□□□ -0.4
PTP4A3-201ENST00000329397 A0A1W2PRX2 142 aa12.54□□□□□ -0.4
PTP4A3-201ENST00000329397 DSCR9P59020 149 aa12.54□□□□□ -0.4
PTP4A3-201ENST00000329397 ATXN8Q156A1 80 aa12.53□□□□□ -0.4
PTP4A3-201ENST00000329397 RNF152Q8N8N0 203 aa12.53□□□□□ -0.4
PTP4A3-201ENST00000329397 TMEM101Q96IK0 257 aa12.53□□□□□ -0.4
PTP4A3-201ENST00000329397 ICOSQ9Y6W8 199 aa12.53□□□□□ -0.4
PTP4A3-201ENST00000329397 FN1P02751 2386 aaKnown RBP12.53□□□□□ -0.4
PTP4A3-201ENST00000329397 TINCRA0A1B0GVN0 87 aa12.52□□□□□ -0.4
PTP4A3-201ENST00000329397 GAGE2BQ13066 116 aa12.52□□□□□ -0.4
PTP4A3-201ENST00000329397 GAGE2EQ4V326 116 aa12.52□□□□□ -0.4
PTP4A3-201ENST00000329397 MRAPQ8TCY5 172 aa12.52□□□□□ -0.4
PTP4A3-201ENST00000329397 GAGE2DQ9UEU5 116 aa12.52□□□□□ -0.4
PTP4A3-201ENST00000329397 J3QLI3 93 aa12.52□□□□□ -0.41
PTP4A3-201ENST00000329397 MIAQ16674 131 aa12.52□□□□□ -0.41
PTP4A3-201ENST00000329397 DGAT2L7PQ6IED9 249 aa12.52□□□□□ -0.41
PTP4A3-201ENST00000329397 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.41
PTP4A3-201ENST00000329397 SPANXA1Q9NS26 97 aa12.51□□□□□ -0.41
PTP4A3-201ENST00000329397 CRLF1O75462 422 aa12.51□□□□□ -0.41
PTP4A3-201ENST00000329397 OR13C6PQ8NH95 151 aa12.51□□□□□ -0.41
PTP4A3-201ENST00000329397 TRGV1A0A0A0MS02 117 aa12.5□□□□□ -0.41
PTP4A3-201ENST00000329397 TRBV30A0A0K0K1B3 111 aa12.5□□□□□ -0.41
PTP4A3-201ENST00000329397 FSHBP01225 129 aa12.5□□□□□ -0.41
PTP4A3-201ENST00000329397 RPL13AP40429 203 aaKnown RBP12.5□□□□□ -0.41
PTP4A3-201ENST00000329397 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
PTP4A3-201ENST00000329397 TRAV13-1A0A0B4J241 112 aa12.49□□□□□ -0.41
PTP4A3-201ENST00000329397 DEFB114Q30KQ6 69 aa12.49□□□□□ -0.41
PTP4A3-201ENST00000329397 A8MTW9 85 aa12.49□□□□□ -0.41
PTP4A3-201ENST00000329397 INSP01308 110 aa12.49□□□□□ -0.41
PTP4A3-201ENST00000329397 SPANXDQ9BXN6 97 aa12.49□□□□□ -0.41
PTP4A3-201ENST00000329397 SPANXCQ9NY87 97 aa12.49□□□□□ -0.41
PTP4A3-201ENST00000329397 PEMTQ9UBM1 199 aa12.49□□□□□ -0.41
PTP4A3-201ENST00000329397 ODF3L2Q3SX64 289 aa12.48□□□□□ -0.41
PTP4A3-201ENST00000329397 C2orf82Q6UX34 121 aa12.48□□□□□ -0.41
PTP4A3-201ENST00000329397 Q9H8V8 135 aa12.48□□□□□ -0.41
PTP4A3-201ENST00000329397 UBR5O95071 2799 aaPredicted RBP12.48□□□□□ -0.41
PTP4A3-201ENST00000329397 H7C423 109 aa12.47□□□□□ -0.41
PTP4A3-201ENST00000329397 J3KT08 172 aa12.47□□□□□ -0.41
PTP4A3-201ENST00000329397 TRAV4A0A0B4J268 109 aa12.47□□□□□ -0.41
PTP4A3-201ENST00000329397 TRBV10-2A0A0K0K1G8 114 aa12.47□□□□□ -0.41
PTP4A3-201ENST00000329397 Q6ZTI0 123 aa12.47□□□□□ -0.41
PTP4A3-201ENST00000329397 C1orf158Q8N1D5 194 aa12.46□□□□□ -0.41
PTP4A3-201ENST00000329397 LRRC75A-AS1Q8N1F1 130 aa12.46□□□□□ -0.41
PTP4A3-201ENST00000329397 C4orf3Q8WVX3 66 aa12.46□□□□□ -0.42
PTP4A3-201ENST00000329397 RS1O15537 224 aa12.45□□□□□ -0.42
PTP4A3-201ENST00000329397 LINC00242Q5T6M2 205 aa12.45□□□□□ -0.42
PTP4A3-201ENST00000329397 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
PTP4A3-201ENST00000329397 Q96MF0 132 aa12.44□□□□□ -0.42
PTP4A3-201ENST00000329397 WFDC10AQ9H1F0 79 aa12.44□□□□□ -0.42
PTP4A3-201ENST00000329397 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
PTP4A3-201ENST00000329397 BEAN1Q3B7T3 259 aa12.44□□□□□ -0.42
PTP4A3-201ENST00000329397 NTM-AS1Q6ZSK4 140 aa12.44□□□□□ -0.42
PTP4A3-201ENST00000329397 STHQ8IWL8 128 aa12.44□□□□□ -0.42
PTP4A3-201ENST00000329397 TRAV8-4A0A0B4J246 113 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms