RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RBX1P62877 108 aa10.2□□□□□ -0.78
SPAST-201ENST00000315285 FAM222AQ5U5X8 452 aa10.2□□□□□ -0.78
SPAST-201ENST00000315285 LINC00643Q86TS7 51 aa10.2□□□□□ -0.78
SPAST-201ENST00000315285 ZNF702PQ9H963 129 aa10.2□□□□□ -0.78
SPAST-201ENST00000315285 MT-ATP8P03928 68 aa10.2□□□□□ -0.78
SPAST-201ENST00000315285 DCANP1Q8TF63 244 aa10.2□□□□□ -0.78
SPAST-201ENST00000315285 H7C423 109 aa10.2□□□□□ -0.78
SPAST-201ENST00000315285 TLN2Q9Y4G6 2542 aa10.19□□□□□ -0.78
SPAST-201ENST00000315285 F8W735 103 aaPredicted RBP10.19□□□□□ -0.78
SPAST-201ENST00000315285 CRYGDP07320 174 aa10.19□□□□□ -0.78
SPAST-201ENST00000315285 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
SPAST-201ENST00000315285 EXPH5Q8NEV8 1989 aa10.19□□□□□ -0.78
SPAST-201ENST00000315285 IGHV4-28A0A0C4DH34 117 aa10.19□□□□□ -0.78
SPAST-201ENST00000315285 SMIM20Q8N5G0 67 aa10.19□□□□□ -0.78
SPAST-201ENST00000315285 REG3AQ06141 175 aa10.19□□□□□ -0.78
SPAST-201ENST00000315285 NREPQ16612 68 aa10.19□□□□□ -0.78
SPAST-201ENST00000315285 USP9XQ93008 2570 aaPredicted RBP10.18□□□□□ -0.78
SPAST-201ENST00000315285 ANKRD11Q6UB99 2663 aaPredicted RBP10.18□□□□□ -0.78
SPAST-201ENST00000315285 TRBV30A0A0K0K1B3 111 aa10.18□□□□□ -0.78
SPAST-201ENST00000315285 SMIM9A6NGZ8 99 aa10.18□□□□□ -0.78
SPAST-201ENST00000315285 PIK3CD-AS1Q5SR53 167 aa10.18□□□□□ -0.78
SPAST-201ENST00000315285 A8MZ25 164 aa10.17□□□□□ -0.78
SPAST-201ENST00000315285 TRBV6-4A0A1B0GX49 114 aa10.17□□□□□ -0.78
SPAST-201ENST00000315285 TRBV6-8A0A0A6YYG3 113 aa10.17□□□□□ -0.78
SPAST-201ENST00000315285 LYRM9A8MSI8 78 aa10.17□□□□□ -0.78
SPAST-201ENST00000315285 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
SPAST-201ENST00000315285 IBA57-AS1B1ANH7 110 aa10.16□□□□□ -0.78
SPAST-201ENST00000315285 UFSP1Q6NVU6 142 aa10.16□□□□□ -0.78
SPAST-201ENST00000315285 C18orf65Q6ZTR6 163 aa10.15□□□□□ -0.79
SPAST-201ENST00000315285 PRM2P04554 102 aa10.14□□□□□ -0.79
SPAST-201ENST00000315285 COX7BP24311 80 aa10.14□□□□□ -0.79
SPAST-201ENST00000315285 HIGD2BQ4VC39 106 aa10.14□□□□□ -0.79
SPAST-201ENST00000315285 PDE6GP18545 87 aa10.14□□□□□ -0.79
SPAST-201ENST00000315285 RNF183Q96D59 192 aa10.14□□□□□ -0.79
SPAST-201ENST00000315285 USP9YO00507 2555 aaPredicted RBP10.13□□□□□ -0.79
SPAST-201ENST00000315285 TIMM17BO60830 172 aa10.13□□□□□ -0.79
SPAST-201ENST00000315285 AVPP01185 164 aa10.13□□□□□ -0.79
SPAST-201ENST00000315285 PKIGQ9Y2B9 76 aa10.13□□□□□ -0.79
SPAST-201ENST00000315285 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
SPAST-201ENST00000315285 PRRC2AP48634 2157 aaKnown RBP10.13□□□□□ -0.79
SPAST-201ENST00000315285 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
SPAST-201ENST00000315285 IGIPA6NJ69 53 aa10.13□□□□□ -0.79
SPAST-201ENST00000315285 TMEM258P61165 79 aa10.13□□□□□ -0.79
SPAST-201ENST00000315285 COX8CQ7Z4L0 72 aa10.12□□□□□ -0.79
SPAST-201ENST00000315285 SETD2Q9BYW2 2564 aaPredicted RBP10.12□□□□□ -0.79
SPAST-201ENST00000315285 ABCA12Q86UK0 2595 aa10.11□□□□□ -0.79
SPAST-201ENST00000315285 EDN2P20800 178 aa10.11□□□□□ -0.79
SPAST-201ENST00000315285 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
SPAST-201ENST00000315285 MRPS36P82909 103 aaKnown RBP10.1□□□□□ -0.79
SPAST-201ENST00000315285 CRIP2P52943 208 aaPredicted RBP10.1□□□□□ -0.79
SPAST-201ENST00000315285 A0A1W2PPR1 153 aa10.1□□□□□ -0.79
SPAST-201ENST00000315285 SLPIP03973 132 aa10.1□□□□□ -0.79
SPAST-201ENST00000315285 LINC01006Q8NI28 216 aa10.1□□□□□ -0.79
SPAST-201ENST00000315285 A0A096LNJ9 63 aa10.09□□□□□ -0.79
SPAST-201ENST00000315285 ZNF843Q8N446 348 aa10.09□□□□□ -0.79
SPAST-201ENST00000315285 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
SPAST-201ENST00000315285 NDUFS5O43920 106 aa10.09□□□□□ -0.79
SPAST-201ENST00000315285 UBE2D1P51668 147 aa10.09□□□□□ -0.79
SPAST-201ENST00000315285 J3KT08 172 aa10.08□□□□□ -0.8
SPAST-201ENST00000315285 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
SPAST-201ENST00000315285 MRGPRG-AS1Q2M3A8 158 aa10.08□□□□□ -0.8
SPAST-201ENST00000315285 BBC3Q96PG8 261 aaPredicted RBP10.08□□□□□ -0.8
SPAST-201ENST00000315285 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
SPAST-201ENST00000315285 SDIM1Q6ZPB5 146 aa10.07□□□□□ -0.8
SPAST-201ENST00000315285 LST1O00453 97 aa10.07□□□□□ -0.8
SPAST-201ENST00000315285 MIFP14174 115 aa10.07□□□□□ -0.8
SPAST-201ENST00000315285 TRAV23DV6A0A075B6W5 121 aa10.06□□□□□ -0.8
SPAST-201ENST00000315285 INAFM1C9JVW0 142 aa10.06□□□□□ -0.8
SPAST-201ENST00000315285 RAI1Q7Z5J4 1906 aaPredicted RBP10.06□□□□□ -0.8
SPAST-201ENST00000315285 UBE2AP49459 152 aa10.06□□□□□ -0.8
SPAST-201ENST00000315285 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
SPAST-201ENST00000315285 UPK3BQ9BT76 320 aa10.06□□□□□ -0.8
SPAST-201ENST00000315285 C6orf99Q4VX62 202 aa10.05□□□□□ -0.8
SPAST-201ENST00000315285 POM121L12Q8N7R1 296 aa10.05□□□□□ -0.8
SPAST-201ENST00000315285 XAGE1AQ9HD64 81 aa10.05□□□□□ -0.8
SPAST-201ENST00000315285 MP68P56378 58 aa10.05□□□□□ -0.8
SPAST-201ENST00000315285 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
SPAST-201ENST00000315285 NDUFB1O75438 58 aa10.04□□□□□ -0.8
SPAST-201ENST00000315285 UBE2D3P61077 147 aa10.04□□□□□ -0.8
SPAST-201ENST00000315285 UBE2D2P62837 147 aa10.04□□□□□ -0.8
SPAST-201ENST00000315285 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
SPAST-201ENST00000315285 ODF3L2Q3SX64 289 aa10.03□□□□□ -0.8
SPAST-201ENST00000315285 CD164L2Q6UWJ8 174 aa10.03□□□□□ -0.8
SPAST-201ENST00000315285 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
SPAST-201ENST00000315285 UQCRQO14949 82 aa10.03□□□□□ -0.8
SPAST-201ENST00000315285 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
SPAST-201ENST00000315285 TET2Q6N021 2002 aaPredicted RBP10.03□□□□□ -0.8
SPAST-201ENST00000315285 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
SPAST-201ENST00000315285 BRI3O95415 125 aa10.03□□□□□ -0.8
SPAST-201ENST00000315285 DNAH12Q6ZR08 3092 aa10.02□□□□□ -0.8
SPAST-201ENST00000315285 IGLV2-18A0A075B6J9 118 aa10.02□□□□□ -0.8
SPAST-201ENST00000315285 ZFYVE26Q68DK2 2539 aa10.02□□□□□ -0.81
SPAST-201ENST00000315285 CHD8Q9HCK8 2581 aa10.02□□□□□ -0.81
SPAST-201ENST00000315285 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.81
SPAST-201ENST00000315285 ADAMTS20P59510 1910 aa10.02□□□□□ -0.81
SPAST-201ENST00000315285 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
SPAST-201ENST00000315285 BPY2O14599 106 aa10.01□□□□□ -0.81
SPAST-201ENST00000315285 XGP55808 180 aa10.01□□□□□ -0.81
SPAST-201ENST00000315285 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
SPAST-201ENST00000315285 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms