RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 EDA2RQ9HAV5 297 aa8.41□□□□□ -1.06
PCDHGC3-201ENST00000308177 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.06
PCDHGC3-201ENST00000308177 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.06
PCDHGC3-201ENST00000308177 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.07
PCDHGC3-201ENST00000308177 TSHBP01222 138 aa8.39□□□□□ -1.07
PCDHGC3-201ENST00000308177 LYRM9A8MSI8 78 aa8.39□□□□□ -1.07
PCDHGC3-201ENST00000308177 Q8N976 141 aa8.39□□□□□ -1.07
PCDHGC3-201ENST00000308177 SMR3AQ99954 134 aa8.39□□□□□ -1.07
PCDHGC3-201ENST00000308177 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
PCDHGC3-201ENST00000308177 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
PCDHGC3-201ENST00000308177 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
PCDHGC3-201ENST00000308177 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
PCDHGC3-201ENST00000308177 TRBV6-4A0A1B0GX49 114 aa8.38□□□□□ -1.07
PCDHGC3-201ENST00000308177 WFDC2Q14508 124 aa8.38□□□□□ -1.07
PCDHGC3-201ENST00000308177 PYGO1Q9Y3Y4 419 aa8.38□□□□□ -1.07
PCDHGC3-201ENST00000308177 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
PCDHGC3-201ENST00000308177 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
PCDHGC3-201ENST00000308177 NFE4Q86UQ8 179 aa8.38□□□□□ -1.07
PCDHGC3-201ENST00000308177 TMEM223A0PJW6 202 aa8.38□□□□□ -1.07
PCDHGC3-201ENST00000308177 CCL18P55774 89 aa8.37□□□□□ -1.07
PCDHGC3-201ENST00000308177 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
PCDHGC3-201ENST00000308177 MIR7-3HGQ8N6C7 128 aa8.37□□□□□ -1.07
PCDHGC3-201ENST00000308177 ANKRD29Q8N6D5 301 aa8.37□□□□□ -1.07
PCDHGC3-201ENST00000308177 ZNF292O60281 2723 aa8.37□□□□□ -1.07
PCDHGC3-201ENST00000308177 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
PCDHGC3-201ENST00000308177 NDUFA7O95182 113 aa8.36□□□□□ -1.07
PCDHGC3-201ENST00000308177 BAALC-AS2P0C853 105 aa8.36□□□□□ -1.07
PCDHGC3-201ENST00000308177 PIK3CD-AS1Q5SR53 167 aa8.36□□□□□ -1.07
PCDHGC3-201ENST00000308177 MIAQ16674 131 aa8.36□□□□□ -1.07
PCDHGC3-201ENST00000308177 C2orf91Q6ZV80 131 aa8.36□□□□□ -1.07
PCDHGC3-201ENST00000308177 CXCL5P42830 114 aa8.35□□□□□ -1.07
PCDHGC3-201ENST00000308177 SPAG11BQ08648 103 aa8.35□□□□□ -1.07
PCDHGC3-201ENST00000308177 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
PCDHGC3-201ENST00000308177 XIRP2A4UGR9 3374 aa8.35□□□□□ -1.07
PCDHGC3-201ENST00000308177 H0YGX0 51 aa8.35□□□□□ -1.07
PCDHGC3-201ENST00000308177 H7C423 109 aa8.35□□□□□ -1.07
PCDHGC3-201ENST00000308177 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
PCDHGC3-201ENST00000308177 F8WEM9 126 aa8.34□□□□□ -1.07
PCDHGC3-201ENST00000308177 TEN1Q86WV5 123 aa8.34□□□□□ -1.07
PCDHGC3-201ENST00000308177 MIFP14174 115 aa8.34□□□□□ -1.07
PCDHGC3-201ENST00000308177 TIRAPP58753 221 aa8.34□□□□□ -1.07
PCDHGC3-201ENST00000308177 LINC00269Q8N2A0 174 aa8.34□□□□□ -1.07
PCDHGC3-201ENST00000308177 FLNBO75369 2602 aaKnown RBP8.34□□□□□ -1.07
PCDHGC3-201ENST00000308177 NDUFA1O15239 70 aa8.33□□□□□ -1.08
PCDHGC3-201ENST00000308177 A0A096LNJ9 63 aa8.33□□□□□ -1.08
PCDHGC3-201ENST00000308177 IGIPA6NJ69 53 aa8.33□□□□□ -1.08
PCDHGC3-201ENST00000308177 IGLV1-51P01701 117 aa8.33□□□□□ -1.08
PCDHGC3-201ENST00000308177 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
PCDHGC3-201ENST00000308177 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
PCDHGC3-201ENST00000308177 CFAP54Q96N23 3096 aa8.33□□□□□ -1.08
PCDHGC3-201ENST00000308177 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 REG3AQ06141 175 aa8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 MGAQ8IWI9 3026 aa8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 A0A0B4J2C4 111 aa8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 SHISA2Q6UWI4 295 aa8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 ORMDL1Q9P0S3 153 aa8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 UBE2D4Q9Y2X8 147 aa8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 C11orf45Q8TAV5 145 aa8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 COL27A1Q8IZC6 1860 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 AGRNO00468 2067 aa8.32□□□□□ -1.08
PCDHGC3-201ENST00000308177 CLEC2BQ92478 149 aa8.31□□□□□ -1.08
PCDHGC3-201ENST00000308177 LOC100131303A0A0U1RQF7 123 aa8.31□□□□□ -1.08
PCDHGC3-201ENST00000308177 C16orf95Q9H693 158 aa8.31□□□□□ -1.08
PCDHGC3-201ENST00000308177 IGHV4-28A0A0C4DH34 117 aa8.3□□□□□ -1.08
PCDHGC3-201ENST00000308177 KIR2DL5BQ8NHK3 375 aa8.3□□□□□ -1.08
PCDHGC3-201ENST00000308177 UBL5Q9BZL1 73 aa8.3□□□□□ -1.08
PCDHGC3-201ENST00000308177 A8MZ25 164 aa8.3□□□□□ -1.08
PCDHGC3-201ENST00000308177 C1orf158Q8N1D5 194 aa8.3□□□□□ -1.08
PCDHGC3-201ENST00000308177 CHCHD10Q8WYQ3 142 aaPredicted RBP8.3□□□□□ -1.08
PCDHGC3-201ENST00000308177 IGLV2-18A0A075B6J9 118 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 TRBV10-2A0A0K0K1G8 114 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 TCL1BO95988 128 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 C15orf53Q8NAA6 179 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 DSCR8Q96T75 97 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 RBX1P62877 108 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 MRPS36P82909 103 aaKnown RBP8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 FAM110AQ9BQ89 295 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 UBE2D3P61077 147 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 UBE2D2P62837 147 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 PTH2Q96A98 100 aa8.29□□□□□ -1.08
PCDHGC3-201ENST00000308177 CENPEQ02224 2701 aa8.28□□□□□ -1.08
PCDHGC3-201ENST00000308177 FOXI1Q12951 378 aa8.28□□□□□ -1.08
PCDHGC3-201ENST00000308177 Q8N2B8 174 aa8.28□□□□□ -1.08
PCDHGC3-201ENST00000308177 H3BT86 120 aa8.28□□□□□ -1.08
PCDHGC3-201ENST00000308177 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
PCDHGC3-201ENST00000308177 LECT2O14960 151 aa8.28□□□□□ -1.08
PCDHGC3-201ENST00000308177 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
PCDHGC3-201ENST00000308177 DEFB131BA0A096LNP1 70 aa8.27□□□□□ -1.09
PCDHGC3-201ENST00000308177 NCR3O14931 201 aa8.27□□□□□ -1.09
PCDHGC3-201ENST00000308177 HECTD1Q9ULT8 2610 aa8.27□□□□□ -1.09
PCDHGC3-201ENST00000308177 UBE2D1P51668 147 aa8.27□□□□□ -1.09
PCDHGC3-201ENST00000308177 HAMPP81172 84 aa8.27□□□□□ -1.09
PCDHGC3-201ENST00000308177 SZT2Q5T011 3432 aa8.26□□□□□ -1.09
PCDHGC3-201ENST00000308177 IBA57-AS1B1ANH7 110 aa8.26□□□□□ -1.09
PCDHGC3-201ENST00000308177 CDC42SE2Q9NRR3 84 aa8.25□□□□□ -1.09
PCDHGC3-201ENST00000308177 ACYP1P07311 99 aa8.25□□□□□ -1.09
PCDHGC3-201ENST00000308177 KLK9Q2XQG4 91 aa8.25□□□□□ -1.09
PCDHGC3-201ENST00000308177 HIGD2BQ4VC39 106 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms