RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SBSPONQ8IVN8 264 aa18■□□□□ 0.47
SDCCAG3-201ENST00000298537 NFE4Q86UQ8 179 aa18■□□□□ 0.47
SDCCAG3-201ENST00000298537 CIDEAO60543 219 aa17.99■□□□□ 0.47
SDCCAG3-201ENST00000298537 TSPEAR-AS2P59090 65 aa17.99■□□□□ 0.47
SDCCAG3-201ENST00000298537 IGHV3-64A0A075B6Q5 118 aa17.99■□□□□ 0.47
SDCCAG3-201ENST00000298537 LYRM9A8MSI8 78 aa17.99■□□□□ 0.47
SDCCAG3-201ENST00000298537 COL5A1-AS1Q5SY13 56 aa17.99■□□□□ 0.47
SDCCAG3-201ENST00000298537 PRB2P02812 416 aaPredicted RBP17.98■□□□□ 0.47
SDCCAG3-201ENST00000298537 ZNF22P17026 224 aaPredicted RBP17.98■□□□□ 0.47
SDCCAG3-201ENST00000298537 CRYBA4P53673 196 aa17.98■□□□□ 0.47
SDCCAG3-201ENST00000298537 NBEAL1Q6ZS30 2694 aa17.98■□□□□ 0.47
SDCCAG3-201ENST00000298537 A0A096LPF7 62 aa17.98■□□□□ 0.47
SDCCAG3-201ENST00000298537 GYPEP15421 78 aa17.98■□□□□ 0.47
SDCCAG3-201ENST00000298537 MIFP14174 115 aa17.97■□□□□ 0.47
SDCCAG3-201ENST00000298537 TMEM97Q5BJF2 176 aa17.97■□□□□ 0.47
SDCCAG3-201ENST00000298537 TENM3Q9P273 2699 aa17.97■□□□□ 0.47
SDCCAG3-201ENST00000298537 A0A0J9YY99 117 aa17.96■□□□□ 0.47
SDCCAG3-201ENST00000298537 PAPPA-AS1Q5QFB9 102 aa17.96■□□□□ 0.47
SDCCAG3-201ENST00000298537 SIVA1O15304 175 aa17.95■□□□□ 0.46
SDCCAG3-201ENST00000298537 DGAT2L7PQ6IED9 249 aa17.95■□□□□ 0.46
SDCCAG3-201ENST00000298537 DAD1P61803 113 aa17.94■□□□□ 0.46
SDCCAG3-201ENST00000298537 GTSF1LQ9H1H1 148 aa17.94■□□□□ 0.46
SDCCAG3-201ENST00000298537 K7EP13 123 aa17.93■□□□□ 0.46
SDCCAG3-201ENST00000298537 MRPS36P82909 103 aaKnown RBP17.93■□□□□ 0.46
SDCCAG3-201ENST00000298537 MYMXA0A1B0GTQ4 84 aa17.93■□□□□ 0.46
SDCCAG3-201ENST00000298537 TMEM223A0PJW6 202 aa17.93■□□□□ 0.46
SDCCAG3-201ENST00000298537 PLEKHB2Q96CS7 222 aa17.93■□□□□ 0.46
SDCCAG3-201ENST00000298537 VSIG2Q96IQ7 327 aa17.92■□□□□ 0.46
SDCCAG3-201ENST00000298537 TMEM243Q9BU79 118 aa17.92■□□□□ 0.46
SDCCAG3-201ENST00000298537 PRO0255Q9UI72 69 aa17.92■□□□□ 0.46
SDCCAG3-201ENST00000298537 CCL25O15444 150 aa17.92■□□□□ 0.46
SDCCAG3-201ENST00000298537 GAGE6Q13070 117 aa17.92■□□□□ 0.46
SDCCAG3-201ENST00000298537 ZNF815PA8K554 130 aa17.9■□□□□ 0.46
SDCCAG3-201ENST00000298537 HTN3P15516 51 aa17.9■□□□□ 0.46
SDCCAG3-201ENST00000298537 UBE2D1P51668 147 aa17.9■□□□□ 0.46
SDCCAG3-201ENST00000298537 TIMM21Q9BVV7 248 aa17.9■□□□□ 0.46
SDCCAG3-201ENST00000298537 TRBV6-8A0A0A6YYG3 113 aa17.9■□□□□ 0.46
SDCCAG3-201ENST00000298537 TRAV8-3A0A0A6YYJ7 113 aa17.89■□□□□ 0.46
SDCCAG3-201ENST00000298537 HERVK_113P61574 105 aa17.89■□□□□ 0.46
SDCCAG3-201ENST00000298537 PAX4O43316 350 aa17.89■□□□□ 0.45
SDCCAG3-201ENST00000298537 COX6A2Q02221 97 aa17.89■□□□□ 0.45
SDCCAG3-201ENST00000298537 HSD52Q0P140 79 aa17.89■□□□□ 0.45
SDCCAG3-201ENST00000298537 SAMD5Q5TGI4 173 aa17.89■□□□□ 0.45
SDCCAG3-201ENST00000298537 UBE2L6O14933 153 aa17.88■□□□□ 0.45
SDCCAG3-201ENST00000298537 CDC42SE2Q9NRR3 84 aa17.88■□□□□ 0.45
SDCCAG3-201ENST00000298537 HIGD1BQ9P298 99 aa17.88■□□□□ 0.45
SDCCAG3-201ENST00000298537 A8MZ25 164 aa17.88■□□□□ 0.45
SDCCAG3-201ENST00000298537 SPART-AS1P0CW21 52 aa17.88■□□□□ 0.45
SDCCAG3-201ENST00000298537 ATP6V0E2Q8NHE4 81 aa17.88■□□□□ 0.45
SDCCAG3-201ENST00000298537 MDFIQ99750 246 aa17.88■□□□□ 0.45
SDCCAG3-201ENST00000298537 AMMECR1LQ6DCA0 310 aa17.87■□□□□ 0.45
SDCCAG3-201ENST00000298537 MGAM2Q2M2H8 2515 aa17.87■□□□□ 0.45
SDCCAG3-201ENST00000298537 TRAV13-1A0A0B4J241 112 aa17.87■□□□□ 0.45
SDCCAG3-201ENST00000298537 ORAOV1Q8WV07 137 aa17.87■□□□□ 0.45
SDCCAG3-201ENST00000298537 IGLV4-60A0A075B6I1 120 aa17.86■□□□□ 0.45
SDCCAG3-201ENST00000298537 TRAV26-1A0A087WT03 109 aa17.86■□□□□ 0.45
SDCCAG3-201ENST00000298537 F5H768 121 aa17.86■□□□□ 0.45
SDCCAG3-201ENST00000298537 TINCRA0A1B0GVN0 87 aa17.86■□□□□ 0.45
SDCCAG3-201ENST00000298537 PTTG1IPP53801 180 aa17.86■□□□□ 0.45
SDCCAG3-201ENST00000298537 FXYD2P54710 66 aa17.86■□□□□ 0.45
SDCCAG3-201ENST00000298537 OR5A1Q8NGJ0 315 aa17.86■□□□□ 0.45
SDCCAG3-201ENST00000298537 CHCHD5Q9BSY4 110 aa17.86■□□□□ 0.45
SDCCAG3-201ENST00000298537 J3QQQ9 107 aa17.85■□□□□ 0.45
SDCCAG3-201ENST00000298537 GCSHP23434 173 aa17.85■□□□□ 0.45
SDCCAG3-201ENST00000298537 ATP5G1P05496 136 aa17.84■□□□□ 0.45
SDCCAG3-201ENST00000298537 SPINK8P0C7L1 97 aa17.84■□□□□ 0.45
SDCCAG3-201ENST00000298537 CDKN2A-AS1Q9UH64 79 aa17.84■□□□□ 0.45
SDCCAG3-201ENST00000298537 CSDC2Q9Y534 153 aaKnown RBP17.84■□□□□ 0.45
SDCCAG3-201ENST00000298537 LINC00242Q5T6M2 205 aa17.84■□□□□ 0.45
SDCCAG3-201ENST00000298537 TAX1BP3O14907 124 aa17.83■□□□□ 0.44
SDCCAG3-201ENST00000298537 IGKV3OR2-268A0A0C4DH90 116 aa17.82■□□□□ 0.44
SDCCAG3-201ENST00000298537 LEPROTO15243 131 aa17.81■□□□□ 0.44
SDCCAG3-201ENST00000298537 IGHV3-30-3P0DP02 117 aa17.81■□□□□ 0.44
SDCCAG3-201ENST00000298537 C12orf74Q32Q52 190 aa17.81■□□□□ 0.44
SDCCAG3-201ENST00000298537 GEMIN7Q9H840 131 aaKnown RBP17.81■□□□□ 0.44
SDCCAG3-201ENST00000298537 SCGB1D4Q6XE38 83 aa17.81■□□□□ 0.44
SDCCAG3-201ENST00000298537 UBE2V1Q13404 147 aa17.8■□□□□ 0.44
SDCCAG3-201ENST00000298537 LGALS3P17931 250 aaKnown RBP17.8■□□□□ 0.44
SDCCAG3-201ENST00000298537 TMEM101Q96IK0 257 aa17.79■□□□□ 0.44
SDCCAG3-201ENST00000298537 HIST1H4GQ99525 98 aa17.78■□□□□ 0.44
SDCCAG3-201ENST00000298537 CEND1Q8N111 149 aa17.78■□□□□ 0.44
SDCCAG3-201ENST00000298537 Q8N3U1 123 aa17.78■□□□□ 0.44
SDCCAG3-201ENST00000298537 COX11Q9Y6N1 276 aa17.77■□□□□ 0.43
SDCCAG3-201ENST00000298537 K7ERJ3 54 aa17.76■□□□□ 0.43
SDCCAG3-201ENST00000298537 SEC11AP67812 179 aa17.76■□□□□ 0.43
SDCCAG3-201ENST00000298537 IGHV1-58A0A0C4DH39 117 aa17.76■□□□□ 0.43
SDCCAG3-201ENST00000298537 TIRAPP58753 221 aa17.76■□□□□ 0.43
SDCCAG3-201ENST00000298537 IGLV5-45A0A087WSX0 123 aa17.75■□□□□ 0.43
SDCCAG3-201ENST00000298537 H7C423 109 aa17.75■□□□□ 0.43
SDCCAG3-201ENST00000298537 C10orf126Q8N4M7 172 aa17.75■□□□□ 0.43
SDCCAG3-201ENST00000298537 NAA38Q9BRA0 125 aaKnown RBP17.75■□□□□ 0.43
SDCCAG3-201ENST00000298537 TMEM262E9PQX1 116 aa17.74■□□□□ 0.43
SDCCAG3-201ENST00000298537 RAB37Q96AX2 223 aa17.74■□□□□ 0.43
SDCCAG3-201ENST00000298537 A0A0J9YWU9 116 aa17.73■□□□□ 0.43
SDCCAG3-201ENST00000298537 K7EIL1 84 aa17.73■□□□□ 0.43
SDCCAG3-201ENST00000298537 TM2D2Q9BX73 214 aa17.73■□□□□ 0.43
SDCCAG3-201ENST00000298537 HUWE1Q7Z6Z7 4374 aaKnown RBP17.73■□□□□ 0.43
SDCCAG3-201ENST00000298537 Q6ZTC4 211 aa17.73■□□□□ 0.43
SDCCAG3-201ENST00000298537 RNF151Q2KHN1 245 aa17.72■□□□□ 0.43
SDCCAG3-201ENST00000298537 MRAPQ8TCY5 172 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms