RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IGKV3OR2-268A0A0C4DH90 116 aa12.75□□□□□ -0.37
CAPN1-201ENST00000279247 A0A096LPF7 62 aa12.74□□□□□ -0.37
CAPN1-201ENST00000279247 INSL3P51460 131 aa12.74□□□□□ -0.37
CAPN1-201ENST00000279247 TRAV13-1A0A0B4J241 112 aa12.74□□□□□ -0.37
CAPN1-201ENST00000279247 SMIM13P0DJ93 91 aa12.73□□□□□ -0.37
CAPN1-201ENST00000279247 UBE2V1Q13404 147 aa12.73□□□□□ -0.37
CAPN1-201ENST00000279247 PYGO1Q9Y3Y4 419 aa12.73□□□□□ -0.37
CAPN1-201ENST00000279247 SPINK8P0C7L1 97 aa12.73□□□□□ -0.37
CAPN1-201ENST00000279247 OXLD1Q5BKU9 147 aa12.73□□□□□ -0.37
CAPN1-201ENST00000279247 NFE4Q86UQ8 179 aa12.72□□□□□ -0.37
CAPN1-201ENST00000279247 AMELXQ99217 191 aa12.72□□□□□ -0.37
CAPN1-201ENST00000279247 TMEM223A0PJW6 202 aa12.72□□□□□ -0.37
CAPN1-201ENST00000279247 UBE2D3P61077 147 aa12.72□□□□□ -0.37
CAPN1-201ENST00000279247 UBE2D2P62837 147 aa12.72□□□□□ -0.37
CAPN1-201ENST00000279247 GEMIN7Q9H840 131 aaKnown RBP12.72□□□□□ -0.37
CAPN1-201ENST00000279247 SPANXA1Q9NS26 97 aa12.72□□□□□ -0.37
CAPN1-201ENST00000279247 H3BRM9 83 aa12.71□□□□□ -0.37
CAPN1-201ENST00000279247 X6R8D5 127 aa12.71□□□□□ -0.37
CAPN1-201ENST00000279247 TRBV10-1A0A0K0K1A3 114 aa12.71□□□□□ -0.38
CAPN1-201ENST00000279247 SFTA2Q6UW10 78 aa12.71□□□□□ -0.38
CAPN1-201ENST00000279247 OVOL2Q9BRP0 275 aa12.71□□□□□ -0.38
CAPN1-201ENST00000279247 C9orf118A6NHY6 69 aa12.7□□□□□ -0.38
CAPN1-201ENST00000279247 UBE2L6O14933 153 aa12.7□□□□□ -0.38
CAPN1-201ENST00000279247 FHL2Q14192 279 aa12.7□□□□□ -0.38
CAPN1-201ENST00000279247 FAM222AQ5U5X8 452 aa12.7□□□□□ -0.38
CAPN1-201ENST00000279247 TIMM21Q9BVV7 248 aa12.7□□□□□ -0.38
CAPN1-201ENST00000279247 GAGE6Q13070 117 aa12.7□□□□□ -0.38
CAPN1-201ENST00000279247 DAZ4Q86SG3 579 aaKnown RBP12.7□□□□□ -0.38
CAPN1-201ENST00000279247 DAZ3Q9NR90 486 aaKnown RBP12.7□□□□□ -0.38
CAPN1-201ENST00000279247 ANK2Q01484 3957 aa12.69□□□□□ -0.38
CAPN1-201ENST00000279247 TM2D2Q9BX73 214 aa12.69□□□□□ -0.38
CAPN1-201ENST00000279247 APOMO95445 188 aa12.68□□□□□ -0.38
CAPN1-201ENST00000279247 IGHV3-30-3P0DP02 117 aa12.68□□□□□ -0.38
CAPN1-201ENST00000279247 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
CAPN1-201ENST00000279247 A0A0J9YY99 117 aa12.68□□□□□ -0.38
CAPN1-201ENST00000279247 C3orf56Q8N813 242 aa12.68□□□□□ -0.38
CAPN1-201ENST00000279247 GAGE10A6NGK3 116 aa12.67□□□□□ -0.38
CAPN1-201ENST00000279247 MRPS36P82909 103 aaKnown RBP12.67□□□□□ -0.38
CAPN1-201ENST00000279247 COX6A2Q02221 97 aa12.67□□□□□ -0.38
CAPN1-201ENST00000279247 HTN3P15516 51 aa12.67□□□□□ -0.38
CAPN1-201ENST00000279247 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
CAPN1-201ENST00000279247 LEPROTO15243 131 aa12.66□□□□□ -0.38
CAPN1-201ENST00000279247 SAMD5Q5TGI4 173 aa12.66□□□□□ -0.38
CAPN1-201ENST00000279247 OR5A1Q8NGJ0 315 aa12.66□□□□□ -0.38
CAPN1-201ENST00000279247 CHCHD5Q9BSY4 110 aa12.66□□□□□ -0.38
CAPN1-201ENST00000279247 TMEM243Q9BU79 118 aa12.66□□□□□ -0.38
CAPN1-201ENST00000279247 TRBV6-4A0A1B0GX49 114 aa12.66□□□□□ -0.38
CAPN1-201ENST00000279247 GYPEP15421 78 aa12.66□□□□□ -0.38
CAPN1-201ENST00000279247 IGHV4-30-4P0DP06 118 aa12.65□□□□□ -0.38
CAPN1-201ENST00000279247 NPC2P61916 151 aa12.65□□□□□ -0.38
CAPN1-201ENST00000279247 UBE2D1P51668 147 aa12.64□□□□□ -0.39
CAPN1-201ENST00000279247 CMYA5Q8N3K9 4069 aa12.64□□□□□ -0.39
CAPN1-201ENST00000279247 IGHV4-28A0A0C4DH34 117 aa12.64□□□□□ -0.39
CAPN1-201ENST00000279247 NBEAL1Q6ZS30 2694 aa12.64□□□□□ -0.39
CAPN1-201ENST00000279247 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-201ENST00000279247 MGAM2Q2M2H8 2515 aa12.64□□□□□ -0.39
CAPN1-201ENST00000279247 APOC4P55056 127 aa12.63□□□□□ -0.39
CAPN1-201ENST00000279247 TAL2Q16559 108 aa12.63□□□□□ -0.39
CAPN1-201ENST00000279247 C10orf126Q8N4M7 172 aa12.63□□□□□ -0.39
CAPN1-201ENST00000279247 SPCS1Q9Y6A9 102 aa12.63□□□□□ -0.39
CAPN1-201ENST00000279247 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
CAPN1-201ENST00000279247 TINCRA0A1B0GVN0 87 aa12.63□□□□□ -0.39
CAPN1-201ENST00000279247 A0A1W2PPM0 123 aa12.62□□□□□ -0.39
CAPN1-201ENST00000279247 PRSS2P07478 247 aa12.62□□□□□ -0.39
CAPN1-201ENST00000279247 FABP2P12104 132 aa12.62□□□□□ -0.39
CAPN1-201ENST00000279247 TMEM262E9PQX1 116 aa12.62□□□□□ -0.39
CAPN1-201ENST00000279247 LINC00242Q5T6M2 205 aa12.62□□□□□ -0.39
CAPN1-201ENST00000279247 TMEM101Q96IK0 257 aa12.62□□□□□ -0.39
CAPN1-201ENST00000279247 NDUFA12Q9UI09 145 aa12.62□□□□□ -0.39
CAPN1-201ENST00000279247 CELA1Q9UNI1 258 aa12.62□□□□□ -0.39
CAPN1-201ENST00000279247 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
CAPN1-201ENST00000279247 IGLV4-60A0A075B6I1 120 aa12.6□□□□□ -0.39
CAPN1-201ENST00000279247 KIR2DL5BQ8NHK3 375 aa12.6□□□□□ -0.39
CAPN1-201ENST00000279247 CDC42SE2Q9NRR3 84 aa12.6□□□□□ -0.39
CAPN1-201ENST00000279247 WFDC9Q8NEX5 89 aa12.6□□□□□ -0.39
CAPN1-201ENST00000279247 IGLL5B9A064 214 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 CRYBA4P53673 196 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 CLPSL2Q6UWE3 100 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 DAND5Q8N907 189 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 VSIG2Q96IQ7 327 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 PGPEP1Q9NXJ5 209 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 H7C2G1 150 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 DAD1P61803 113 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 RETNQ9HD89 108 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 TRBV6-8A0A0A6YYG3 113 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 A0A0J9YXY3 114 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 MTURNQ8N3F0 131 aa12.59□□□□□ -0.39
CAPN1-201ENST00000279247 PAX4O43316 350 aa12.58□□□□□ -0.4
CAPN1-201ENST00000279247 ATP6V0E2Q8NHE4 81 aa12.58□□□□□ -0.4
CAPN1-201ENST00000279247 IGHV3-30P01768 117 aa12.58□□□□□ -0.4
CAPN1-201ENST00000279247 IGHV3-30-5P0DP03 117 aa12.58□□□□□ -0.4
CAPN1-201ENST00000279247 GTF2H5Q6ZYL4 71 aa12.58□□□□□ -0.4
CAPN1-201ENST00000279247 SMIM9A6NGZ8 99 aa12.57□□□□□ -0.4
CAPN1-201ENST00000279247 F5H768 121 aa12.57□□□□□ -0.4
CAPN1-201ENST00000279247 TMEM238LA0A1B0GVL6 79 aa12.56□□□□□ -0.4
CAPN1-201ENST00000279247 A6NJY4 79 aa12.56□□□□□ -0.4
CAPN1-201ENST00000279247 MUSTN1Q8IVN3 82 aa12.56□□□□□ -0.4
CAPN1-201ENST00000279247 PRO0255Q9UI72 69 aa12.56□□□□□ -0.4
CAPN1-201ENST00000279247 K7EP34 96 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 370.7 ms