RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 LAMTOR3Q9UHA4 124 aa6.91□□□□□ -1.3
COL21A1-201ENST00000244728 COL6A3P12111 3177 aa6.91□□□□□ -1.3
COL21A1-201ENST00000244728 Q9HAA7 133 aa6.91□□□□□ -1.3
COL21A1-201ENST00000244728 TRAV4A0A0B4J268 109 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 LGALS9O00182 355 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 TRIAP1O43715 76 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 CRLF1O75462 422 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 TEP1Q99973 2627 aaKnown RBP6.9□□□□□ -1.3
COL21A1-201ENST00000244728 IGHV1-58A0A0C4DH39 117 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 TMEM223A0PJW6 202 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 EDN2P20800 178 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 Q6YL49 198 aa6.9□□□□□ -1.3
COL21A1-201ENST00000244728 HELZ2Q9BYK8 2649 aaKnown RBP6.9□□□□□ -1.3
COL21A1-201ENST00000244728 HERVK_113P63121 156 aa6.9□□□□□ -1.31
COL21A1-201ENST00000244728 Q6ZSV7 163 aa6.9□□□□□ -1.31
COL21A1-201ENST00000244728 MAP6D1Q9H9H5 199 aa6.9□□□□□ -1.31
COL21A1-201ENST00000244728 INAFM1C9JVW0 142 aa6.9□□□□□ -1.31
COL21A1-201ENST00000244728 PSMG3-AS1Q96PY0 264 aa6.9□□□□□ -1.31
COL21A1-201ENST00000244728 FLNAP21333 2647 aaKnown RBP6.89□□□□□ -1.31
COL21A1-201ENST00000244728 K7EQG2 157 aa6.89□□□□□ -1.31
COL21A1-201ENST00000244728 FRYQ5TBA9 3013 aa6.89□□□□□ -1.31
COL21A1-201ENST00000244728 POLR2KP53803 58 aaKnown RBP6.89□□□□□ -1.31
COL21A1-201ENST00000244728 Q6ZTI0 123 aa6.89□□□□□ -1.31
COL21A1-201ENST00000244728 ITPR3Q14573 2671 aa6.89□□□□□ -1.31
COL21A1-201ENST00000244728 IGLV4-3A0A075B6K6 122 aa6.89□□□□□ -1.31
COL21A1-201ENST00000244728 NBEAQ8NFP9 2946 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 PROK1P58294 105 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 UBE2D3P61077 147 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 UBE2D2P62837 147 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 CRIP2P52943 208 aaPredicted RBP6.88□□□□□ -1.31
COL21A1-201ENST00000244728 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 SMR3AQ99954 134 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 IGIPA6NJ69 53 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 M0QY20 66 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 MIAQ16674 131 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
COL21A1-201ENST00000244728 ACYP1P07311 99 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 C4orf3Q8WVX3 66 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 WFDC10AQ9H1F0 79 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 A8MZ25 164 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 HERV-K104P63124 156 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 DEFB114Q30KQ6 69 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 CDIP1Q9H305 208 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 IGLV4-69A0A075B6H9 119 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
COL21A1-201ENST00000244728 TINCRA0A1B0GVN0 87 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 SOCS3O14543 225 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 C9orf66Q5T8R8 295 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 LINC00482Q8N8I6 264 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 VSIG2Q96IQ7 327 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 TRAV13-2A0A0B4J235 113 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 K7EQD1 137 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 PRO0461Q9UI25 63 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 IGKV2D-24A0A075B6R9 120 aa6.86□□□□□ -1.31
COL21A1-201ENST00000244728 TMEM263Q8WUH6 116 aaKnown RBP6.86□□□□□ -1.31
COL21A1-201ENST00000244728 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
COL21A1-201ENST00000244728 TMEM89A2RUT3 159 aa6.85□□□□□ -1.31
COL21A1-201ENST00000244728 PSMB8P28062 276 aa6.85□□□□□ -1.31
COL21A1-201ENST00000244728 CDKN2A-AS1Q9UH64 79 aa6.85□□□□□ -1.31
COL21A1-201ENST00000244728 RPL32P62910 135 aaKnown RBP6.85□□□□□ -1.31
COL21A1-201ENST00000244728 C16orf74Q96GX8 76 aa6.85□□□□□ -1.31
COL21A1-201ENST00000244728 BBC3Q96PG8 261 aaPredicted RBP6.85□□□□□ -1.31
COL21A1-201ENST00000244728 CHD6Q8TD26 2715 aa6.85□□□□□ -1.31
COL21A1-201ENST00000244728 TRBV6-5A0A0K0K1A5 114 aa6.85□□□□□ -1.31
COL21A1-201ENST00000244728 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
COL21A1-201ENST00000244728 TSHBP01222 138 aa6.85□□□□□ -1.31
COL21A1-201ENST00000244728 BOD1L1Q8NFC6 3051 aa6.84□□□□□ -1.31
COL21A1-201ENST00000244728 FRYLO94915 3013 aa6.84□□□□□ -1.31
COL21A1-201ENST00000244728 IGKV3D-7A0A0C4DH55 119 aa6.84□□□□□ -1.31
COL21A1-201ENST00000244728 ATP5G1P05496 136 aa6.84□□□□□ -1.31
COL21A1-201ENST00000244728 SPART-AS1P0CW21 52 aa6.84□□□□□ -1.31
COL21A1-201ENST00000244728 CRYGDP07320 174 aa6.84□□□□□ -1.32
COL21A1-201ENST00000244728 KLLNB2CW77 178 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 ZNF702PQ9H963 129 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 LINC01006Q8NI28 216 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 SPANXDQ9BXN6 97 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 ZNF580Q9UK33 172 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 TRACP01848 142 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 KLK12Q9UKR0 248 aa6.83□□□□□ -1.32
COL21A1-201ENST00000244728 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
COL21A1-201ENST00000244728 CITED1Q99966 193 aa6.82□□□□□ -1.32
COL21A1-201ENST00000244728 LINC00467Q9BRT7 94 aa6.82□□□□□ -1.32
COL21A1-201ENST00000244728 SETXQ7Z333 2677 aaKnown RBP6.82□□□□□ -1.32
COL21A1-201ENST00000244728 TRAV25A0A0B4J276 109 aa6.82□□□□□ -1.32
COL21A1-201ENST00000244728 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
COL21A1-201ENST00000244728 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
COL21A1-201ENST00000244728 H7C423 109 aa6.82□□□□□ -1.32
COL21A1-201ENST00000244728 DAZ2Q13117 558 aaKnown RBP6.82□□□□□ -1.32
COL21A1-201ENST00000244728 DAZ4Q86SG3 579 aaKnown RBP6.82□□□□□ -1.32
COL21A1-201ENST00000244728 DAZ3Q9NR90 486 aaKnown RBP6.82□□□□□ -1.32
COL21A1-201ENST00000244728 COX7A2LO14548 114 aa6.81□□□□□ -1.32
COL21A1-201ENST00000244728 MRPL23Q16540 153 aaKnown RBP6.81□□□□□ -1.32
COL21A1-201ENST00000244728 A0A1B0GX51 115 aa6.81□□□□□ -1.32
COL21A1-201ENST00000244728 LRRC75A-AS1Q8N1F1 130 aa6.81□□□□□ -1.32
COL21A1-201ENST00000244728 LST1O00453 97 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms