RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Plpp2Q9DAX2 276 aa11□□□□□ -0.65
Clcn4-203ENSMUST00000210061 SpenQ62504 3644 aaKnown RBP11□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Rpl8P62918 257 aaKnown RBP10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 ErhP84089 104 aa10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 SlpiP97430 131 aa10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Cdcp2Q8BQH6 427 aa10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Frem1Q684R7 2191 aa10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm4565A0A140LJ87 301 aa10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm6176J3QK59 301 aa10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm4567Q3UTA8 301 aa10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Il25Q8VHH8 169 aa10.99□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Trav12-3A0A075B648 115 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm27021M0QWE2 156 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Tac3P55099 116 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 SelplgQ62170 397 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Olfr1535Q7TQU0 326 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Ercc8Q8CFD5 397 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Tmed6Q9CQG0 239 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Oxld1Q9CR10 201 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 4933414I15RikQ9D4D5 133 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Tmub1Q9JMG3 245 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Pf4Q9Z126 105 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Cep295Q8BQ48 2412 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Trav4-4-dv10A0A075B651 110 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm36368A0A1D5RLK8 91 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 1700084M14RikB1AT01 78 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 1810011H11RikE9PVZ2 95 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm21874J3QNZ6 232 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Ccl2P10148 148 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Tff3Q62395 81 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Tmem140Q8BGY5 185 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 RnasekQ8K3C0 98 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Tmem178aQ9CZ16 297 aa10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Map1bP14873 2464 aaKnown RBP10.98□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Zfp109A0A0U1RPC5 652 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Olfr177E9Q7W1 309 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm4791J3QQ14 102 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Tnfaip6O08859 275 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Rab33bO35963 229 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Shisal1Q0VBP7 198 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm9944Q8C559 102 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Nit1Q8VDK1 323 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Prb1Q91X93 504 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Ssbp1Q9CYR0 152 aaKnown RBP10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 DscamQ9ERC8 2013 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Cacna1aP97445 2368 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Phxr2P15972 65 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Ube2g1P62254 170 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Q08AU9 97 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 KncnQ307W7 124 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 RprmlQ3URD2 117 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Fbln7Q501P1 440 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gng5Q80SZ7 68 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 C330021F23RikQ8C7T0 141 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Vstm5Q9D806 199 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Tmprss5Q9ER04 455 aa10.97□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Trav8n-2A0A075B633 112 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Olfr1436A0PK57 315 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Gm5093E9PZB3 174 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 CtsgP28293 261 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Sp9Q64HY3 484 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Olfr491Q8VG06 310 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Ramp1Q9WTJ5 148 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Asxl3Q8C4A5 2259 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Spta1P08032 2415 aa10.96□□□□□ -0.65
Clcn4-203ENSMUST00000210061 Trav14n-3A0A075B645 120 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Ighv8-6A0A0A6YXA3 118 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Igkv14-130A0A0G2JF45 117 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Zfp979A2A799 407 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Ighv3-6P18531 116 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Fxyd3Q61835 88 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Tnfsf18Q7TS55 173 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Rbfox2Q8BP71 449 aaKnown RBP10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Cldn16Q925N4 235 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Tmem225Q9D9S2 230 aa10.96□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Arfgef3Q3UGY8 2170 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Rpl27aP14115 148 aaKnown RBP10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Gm4792Q569Q2 183 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Olfr996Q7TRA0 314 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Olfr1453Q8VFX0 307 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Scgb1b11A0A087WQJ0 93 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Gm20379A0A087WR34 119 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Ms4a12A0A087WSB9 263 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Ighv9-4A0A0A6YWH6 117 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Olfr748E9Q9Z0 307 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 P01792 123 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 P04943 107 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Lcn2P11672 200 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Spem1Q5F289 310 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Rln3Q8CHK2 141 aa10.95□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Zfp950A0A0U1RQ46 609 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Awat1A2ADU9 328 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Gm15127B1AVZ5 449 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Gm15091B1AZM2 449 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Olfr869E9PX82 323 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Olfr898L7N1Z5 316 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 NgfP01139 241 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Pex7P97865 318 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 AsipQ03288 131 aa10.94□□□□□ -0.66
Clcn4-203ENSMUST00000210061 Gm10645Q3UPY1 145 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 97.1 ms