RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Ighv1-42A0A0A6YY38 117 aa7.9□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm15128A2ADW8 449 aa7.9□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Lrp10Q7TQH7 713 aa7.9□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Spink6Q8BT20 105 aa7.9□□□□□ -1.14
Col6a5-201ENSMUST00000165165 Gm20726G3UX18 150 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Cnr2P47936 347 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Col9a1Q05722 921 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Shisa6Q3UH99 525 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Plppr1Q8BFZ2 325 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Hs3st3b1Q9QZS6 390 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trav14d-1A0A075B6B1 121 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trav21-dv12A0A075B6C4 109 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Eid2bE9Q2Y0 151 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 H2al1oL7MU04 110 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ntn1O09118 604 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 SellP18337 372 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 B230307C23RikQ8BLB2 64 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Pcnx2Q5DU28 2122 aa7.9□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Pebp1P70296 187 aaKnown RBP7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Vdac2Q60930 295 aaKnown RBP7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Vgll4Q80V24 287 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Fam214bQ8BR27 538 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Q8R092 253 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Mrps18cQ8R2L5 143 aaKnown RBP7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Zgrf1Q0VGT4 1863 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trbv31A0A075B5J5 111 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm6871L7N248 545 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 P01669 111 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 NdpP48744 131 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Clpsl2Q3UW21 102 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tmprss12Q3V0Q7 336 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm9747Q810H1 104 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tmem91Q8C581 172 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Mcrip2Q9CQB2 160 aaKnown RBP7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Sptbn1Q62261 2363 aaKnown RBP7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ighv5-4A0A075B5P9 117 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ccl11P48298 97 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gng5Q80SZ7 68 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Wbp1lQ8BGW2 348 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ntn3Q9R1A3 580 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ca11O70354 328 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tcrg-V1P06325 135 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gata1P17679 413 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Defb4P82019 63 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Olfr139Q60891 315 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Nrn1lQ8C4W3 162 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Abca4O35600 2310 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Znf385cA2A5E6 429 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 1500009C09RikD3YYW9 81 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Sigmar1O55242 223 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Nkx2-8O70584 235 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Efna2P52801 209 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 AdoQ6PDY2 256 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Olfr491Q8VG06 310 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Lyzl1Q9CPX3 148 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 D430019H16RikJ3QPM6 83 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Sod1P08228 154 aaKnown RBP7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 4930583I09RikQ9D2E3 102 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Hils1Q9QYL0 170 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Prss30Q9QYZ9 310 aa7.89□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Brca1P48754 1812 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 H2al2bA9Z055 111 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 9230112D13RikQ9D260 137 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Il2raP01590 268 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tmem241Q3UME2 297 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Lrcol1Q3URS3 161 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ighv1-49A0A0A6YWX2 117 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Plac1Q9JI83 173 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm45213A0A0U1RNZ6 101 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Pax8Q00288 457 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Cmc4Q61908 68 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Igkv4-50A0A0B4J1J0 117 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tmem258P61166 79 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tmem8bB1AWJ5 472 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 9830107B12RikD3Z5D6 160 aa7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Iba57Q8CAK1 358 aaKnown RBP7.88□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trav7n-4A0A075B620 113 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trav18A0A075B656 109 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Igkv4-54A0A0G2JES9 117 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 H2al1jA2BFR3 109 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trav16d-dv11A0A075B617 117 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trav6n-5A0A075B621 112 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trav6-5A0A075B6B5 112 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Igkv4-61A0A0G2JH00 117 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Inafm2A0A1L1STD6 152 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Higd1aQ9JLR9 95 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm26938S4R185 226 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Thsd7aQ69ZU6 1645 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 F5O88783 2183 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Rpl23P62830 140 aaKnown RBP7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 PappaQ8R4K8 1624 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Igkv4-59A0A0B4J1I8 117 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm9772F6XPD8 135 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Lgals6O54891 301 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 MdfiP70331 251 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Nr2c2apQ3TV70 140 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm94Q3V2D2 93 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Saxo2Q8BQB6 394 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Prr15Q9D1T5 122 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Dpm2Q9Z324 84 aa7.87□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms