RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Trav6-1A0A075B5Z8 112 aa15.12■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Tcrg-V5A0A0G2JGV5 113 aa15.12■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Defa37K9J724 93 aa15.12■□□□□ 0.01
Scaf11-201ENSMUST00000047835 P01680 129 aa15.12■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Defa5P28312 93 aa15.12■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Ighv1-34A0A075B5V2 117 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Oosp2Q4FZG8 168 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 AgaQ64191 346 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Slc25a47Q6IS41 310 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 SelenokQ9JLJ1 94 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Trdv5A0A075B661 115 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Mc5rP41149 325 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Tmem91Q8C581 172 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 D630044L22RikQ8C701 164 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Dock4P59764 1978 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Tnfsf11O35235 316 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Supt4h1aP63271 117 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Adam8Q05910 826 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Prima1Q810F0 153 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Dnal4Q9DCM4 105 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 ArtnQ9Z0L2 224 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Tmem131O70472 1877 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Trav6d-3A0A075B6B3 112 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Trav6-3Q5R1E6 112 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Prok2Q9QXU7 128 aa15.11■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Trav4-2A0A075B638 110 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Dnase2P56542 353 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Igkv14-111A0A140T8P9 117 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Psg22Q810J1 475 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Vmn1r216Q8R257 298 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Olfr1330Q8VEY6 315 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Mob4Q6PEB6 225 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Srsf7Q8BL97 267 aaKnown RBP15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Fstl3Q9EQC7 256 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Gm7849D3YX03 116 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Zfp72Q0VFY0 435 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Olfr223Q8VF69 319 aa15.1■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Trbv31A0A075B5J5 111 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Nat8f4G5E8L3 226 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Efnb3O35393 340 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Defb30Q30KN4 75 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Gm10775Q3V290 127 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Parm1Q923D3 296 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Ighv1-26A0A075B5V0 117 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 1700025B11RikA0A087WNZ6 93 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Csn3P06796 181 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Ido2Q8R0V5 405 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Fbln5Q9WVH9 448 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Trav16nA0A075B634 117 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Gm5819E9PZ96 154 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 NgfP01139 241 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 SbpP15501 199 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Eml5Q8BQM8 1977 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 PpyP10601 100 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Olfr1419Q7TQS2 343 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Gm4894Q8CA09 118 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Hcfc2Q9D968 241 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Phlda3Q9WV95 125 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Cfap46E9Q2C0 2641 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 GchfrP99025 84 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Pmaip1Q9JM54 103 aa15.09■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Ss18Q62280 418 aa15.08■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Olfr982Q8VGB3 321 aa15.08■□□□□ 0.01
Scaf11-201ENSMUST00000047835 Thy1P01831 162 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Sh3bgrl3Q91VW3 93 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Nup214Q80U93 2085 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Tmem95P0DJF3 176 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Gm28372A0A087WNV0 220 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Zic3Q62521 466 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Fmc1Q9CR13 113 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 MNCb-2875Q9DCB3 74 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Ncor1Q60974 2453 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Plxna4Q80UG2 1893 aa15.08■□□□□ 0
Scaf11-201ENSMUST00000047835 Gm10020E9QAZ2 204 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Ucp1P12242 307 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Cox6b1P56391 86 aaKnown RBP15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Rpl15Q9CZM2 204 aaKnown RBP15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Cd200r1Q9ES57 326 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Ighv5-12-4A0A0A6YWG4 117 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Defa3P28310 93 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Defa10P50708 93 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Defa15P50713 93 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Rpl23P62830 140 aaKnown RBP15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 SprnQ8BWU1 147 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Cd5lQ9QWK4 352 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Vwa8Q8CC88 1905 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Igkv14-130A0A0G2JF45 117 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Exph5Q0VAV2 1960 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Loxl2P58022 776 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Timm21Q8CCM6 249 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Xlr5cQ9JJR2 179 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Ifitm10Q8BR26 201 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Gm4763Q8CFJ5 196 aa15.07■□□□□ 0
Scaf11-201ENSMUST00000047835 Trav7-4A0A075B6C1 113 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 Trav7d-4Q5R1H9 113 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 ChtopQ9CY57 249 aaKnown RBP15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 Sp5Q9JHX2 398 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 P01726 129 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 Rbm38Q62176 237 aaKnown RBP15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 Tmem52Q9D702 196 aa15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms