RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 IappP12968 93 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Myoz1Q9JK37 296 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Nckap5E9QAE1 1909 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Rpl13aP19253 203 aaKnown RBP9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Vsig8Q6P3A4 417 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm4763Q8CFJ5 196 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr1330Q8VEY6 315 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm28305F6U473 122 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Adcyap1O70176 175 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Nkx2-8O70584 235 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Fabp4P04117 132 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 BlnkQ9QUN3 457 aa9.69□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ighv5-8A0A075B676 92 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr177E9Q7W1 309 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr399Q7TRX3 311 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmem52Q9D702 196 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Trbv31A0A075B5J5 111 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Trav4-4-dv10A0A075B651 110 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmem238lA0A1B0GS74 79 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Pla2g2aP31482 146 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 RprmlQ3URD2 117 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Scgb1b15A0A087WP50 93 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Iglc2P01844 104 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Wnt2P21552 360 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 SriQ6P069 198 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Prss22Q9ER10 306 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Plxnb1Q8CJH3 2119 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Cacna1hO88427 2365 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr1191-ps1A0A1L1STD5 311 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Cd46O88174 365 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 P04945 108 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Dock9Q8BIK4 2055 aa9.68□□□□□ -0.86
Pcif1-201ENSMUST00000041643 LoxP28301 411 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ttc9cQ810A3 171 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr484Q8VFD3 321 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Fgf16Q9ESL8 207 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Igkv4-80A0A075B5L7 116 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 A730046J19RikA0A1B0GSN8 89 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Psg18B2RSG7 476 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm28051J3QMA2 81 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmem91Q8C581 172 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Dusp14Q9JLY7 198 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Trav16A0A075B653 116 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 AdoQ6PDY2 256 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gpr35Q9ES90 307 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tnfsf11O35235 316 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gsx1P31315 261 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 GchfrP99025 84 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Arl14eplQ3UKZ7 152 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Znrd1Q791N7 123 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr1437Q7TQR7 312 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm21983D6RFS9 131 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Loxl1P97873 607 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tmem140Q8BGY5 185 aa9.67□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm9970F6ZED4 185 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Rbfox3Q8BIF2 374 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 A730015C16RikQ8C992 119 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gab2Q9Z1S8 665 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr1369-ps1A0A140T8K7 317 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Tcl1b2P56841 117 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Atp6v0cP63082 155 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm10803Q3TZS6 135 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ido2Q8R0V5 405 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Trav2Q5R1I9 109 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr810Q8VFH9 312 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Rchy1Q9CR50 261 aa9.66□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Vmn1r149E9PWL6 307 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Vmn1r101E9Q365 307 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Vmn1r158G3UY92 307 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm15293D3YX02 93 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Zfp677Q6PEP4 634 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Map1lc3aQ91VR7 121 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 AcacaQ5SWU9 2345 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ctxnd2A0A1B0GQX3 59 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm20825J3QM67 227 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ssty2Q149W4 227 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Nr2c2apQ3TV70 140 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm21394Q497R7 227 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Trav15-1-dv6-1Q5R1D2 117 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm20854Q62461 227 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 HelzQ6DFV5 1964 aaKnown RBP9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Olfr556E9Q549 324 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Ucp1P12242 307 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Rnf224Q3UIW8 156 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Znf48Q3US17 591 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Usmg5Q78IK2 58 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Gm14214V9GX35 225 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 Notch4P31695 1964 aa9.65□□□□□ -0.86
Pcif1-201ENSMUST00000041643 NotoQ5TIS6 240 aa9.65□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Olfr954Q9EQB6 314 aa9.65□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ndufaf3Q9JKL4 185 aa9.65□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Cbln1Q9R171 193 aa9.65□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm17660B9UIU9 90 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Rab24P35290 203 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm28778A0A087WSK7 233 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Defa35E9QLQ1 93 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ifitm5O88728 134 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Tnfrsf9P20334 256 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ccl6P27784 116 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 LalbaP29752 143 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms