RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Zdhhc16Q9ESG8 361 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Pf4Q9Z126 105 aa15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 BptfA2A654 3036 aaKnown RBP15.11■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Ighv9-4A0A0A6YWH6 117 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Zfp980A2A9J5 645 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr1337A2ACY8 315 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Tmem91Q8C581 172 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 V1ra8Q9EQ48 279 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Trav7n-4A0A075B620 113 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Gm37388A0A0A6YY46 143 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Lgals3P16110 264 aaKnown RBP15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Loxl2P58022 776 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Spem1Q5F289 310 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr263Q7TQT8 317 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Zfp119aQ9JIC0 545 aa15.1■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr1293-psA0A1L1SVB5 326 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Cd59aO55186 123 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 B430305J03RikQ8BQQ8 176 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Nus1Q99LJ8 297 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr1369-ps1A0A140T8K7 317 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Klf12O35738 402 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Hapln4Q80WM4 400 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Nanos1Q80WY3 267 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Ifi27l2bQ8VC49 283 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr877Q8VF62 311 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Ccl8Q9Z121 97 aa15.09■□□□□ 0.01
Shkbp1-201ENSMUST00000003857 Olfr748E9Q9Z0 307 aa15.08■□□□□ 0
Shkbp1-201ENSMUST00000003857 Gm5148Q8BGG2 154 aa15.08■□□□□ 0
Shkbp1-201ENSMUST00000003857 Zmat4Q8BZ94 229 aa15.08■□□□□ 0
Shkbp1-201ENSMUST00000003857 Olfr481Q8VGI5 312 aa15.08■□□□□ 0
Shkbp1-201ENSMUST00000003857 Il25Q8VHH8 169 aa15.08■□□□□ 0
Shkbp1-201ENSMUST00000003857 Olfr148Q60887 310 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Fgfrl1Q91V87 529 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Col13a1Q9R1N9 751 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Ighv1-7A0A075B5T7 117 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Olfr1245A0A1L1SQJ6 307 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Cd209gD3Z5D4 194 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Gm9602J3QPD5 205 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Cxcl13O55038 109 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 P01792 123 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Cd27P41272 250 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 A930003A15RikQ3U552 87 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Scgb2b24Q7M747 112 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Cbln4Q8BME9 198 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Prelid1Q8R107 217 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Olfr1454Q8VFW2 307 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Gpr87Q99MT7 358 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Tmem9bQ9JJR8 199 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Dmxl2Q8BPN8 3032 aa15.07■□□□□ 0
Shkbp1-201ENSMUST00000003857 Olfr1179A2AUS6 307 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Tac3P55099 116 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Dlx6P70397 175 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Olfr123Q8VFQ1 309 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Mien1Q9CQ86 115 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Ociad1Q9CRD0 247 aaKnown RBP15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Vmn1r119E9Q4H3 307 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 IappP12968 93 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Phxr2P15972 65 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Olfr15P23275 312 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Gng5Q80SZ7 68 aa15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Ptrh2Q8R2Y8 181 aaKnown RBP15.06■□□□□ 0
Shkbp1-201ENSMUST00000003857 Cox7a2P48771 83 aa15.05■□□□□ 0
Shkbp1-201ENSMUST00000003857 Tbr1Q64336 681 aa15.05■□□□□ 0
Shkbp1-201ENSMUST00000003857 Olfr1419Q7TQS2 343 aa15.05■□□□□ 0
Shkbp1-201ENSMUST00000003857 Gab2Q9Z1S8 665 aa15.05■□□□□ 0
Shkbp1-201ENSMUST00000003857 Trav16A0A075B653 116 aa15.05■□□□□ -0
Shkbp1-201ENSMUST00000003857 Ascl5M0QWB7 188 aa15.05■□□□□ -0
Shkbp1-201ENSMUST00000003857 Olfr147Q60886 317 aa15.05■□□□□ -0
Shkbp1-201ENSMUST00000003857 Iba57Q8CAK1 358 aaKnown RBP15.05■□□□□ -0
Shkbp1-201ENSMUST00000003857 Akap9Q70FJ1 3797 aa15.05■□□□□ -0
Shkbp1-201ENSMUST00000003857 Gm27021M0QWE2 156 aa15.04■□□□□ -0
Shkbp1-201ENSMUST00000003857 Vmn1r195Q5SVD6 316 aa15.04■□□□□ -0
Shkbp1-201ENSMUST00000003857 Gm9945Q8BNZ3 91 aa15.04■□□□□ -0
Shkbp1-201ENSMUST00000003857 Tmprss5Q9ER04 455 aa15.04■□□□□ -0
Shkbp1-201ENSMUST00000003857 Dnajc30P59041 219 aa15.04■□□□□ -0
Shkbp1-201ENSMUST00000003857 Zcwpw2Q08EN7 125 aa15.04■□□□□ -0
Shkbp1-201ENSMUST00000003857 Olfr954Q9EQB6 314 aa15.04■□□□□ -0
Shkbp1-201ENSMUST00000003857 Gm28778A0A087WSK7 233 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Obp2bA2BHR0 176 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Rbp4Q00724 201 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Slc17a2Q5SZA1 478 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Rnd1Q8BLR7 232 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Ercc8Q8CFD5 397 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Olfr127Q8VF25 323 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Siglec12Q91Y57 467 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Olfr19Q9JHB2 309 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Arhgef17Q80U35 2057 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Ighv5-9A0A075B5Q2 117 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Prrx1P63013 245 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Cib3Q0P523 160 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Olfr996Q7TRA0 314 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Olfr1272Q8VGN8 308 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 ChtopQ9CY57 249 aaKnown RBP15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Vmn1r61W4VSP5 300 aa15.03■□□□□ -0
Shkbp1-201ENSMUST00000003857 Thap8E9Q695 213 aa15.02■□□□□ -0
Shkbp1-201ENSMUST00000003857 Olfr411Q7TRW8 315 aa15.02■□□□□ -0
Shkbp1-201ENSMUST00000003857 Elovl5Q8BHI7 299 aa15.02■□□□□ -0
Shkbp1-201ENSMUST00000003857 Olfr1195Q8VG21 308 aa15.02■□□□□ -0
Shkbp1-201ENSMUST00000003857 Tmed6Q9CQG0 239 aa15.02■□□□□ -0
Shkbp1-201ENSMUST00000003857 F5O88783 2183 aa15.02■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 72.4 ms