RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W TFB2Q02939 513 aa1.81□□□□□ -2.12
SGF11YPL047W CRT10Q08226 957 aa1.81□□□□□ -2.12
SGF11YPL047W NRT1Q08485 598 aa1.81□□□□□ -2.12
SGF11YPL047W DSE3Q08729 430 aa1.81□□□□□ -2.12
SGF11YPL047W CET1O13297 549 aaPredicted RBP1.8□□□□□ -2.12
SGF11YPL047W SEC12P11655 471 aa1.8□□□□□ -2.12
SGF11YPL047W HMG2P12684 1045 aa1.8□□□□□ -2.12
SGF11YPL047W ACO1P19414 778 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SGF11YPL047W FTH1P38310 465 aa1.8□□□□□ -2.12
SGF11YPL047W GND1P38720 489 aaKnown RBP1.8□□□□□ -2.12
SGF11YPL047W MGS1P40151 587 aa1.8□□□□□ -2.12
SGF11YPL047W CIR1P42940 261 aa1.8□□□□□ -2.12
SGF11YPL047W OSW7P43611 510 aa1.8□□□□□ -2.12
SGF11YPL047W YGR153WP48238 217 aa1.8□□□□□ -2.12
SGF11YPL047W YDL183CP48569 320 aa1.8□□□□□ -2.12
SGF11YPL047W MTD1Q02046 320 aaKnown RBP1.8□□□□□ -2.12
SGF11YPL047W YOR389WQ08912 624 aa1.8□□□□□ -2.12
SGF11YPL047W RPS21BQ3E754 87 aaKnown RBP1.8□□□□□ -2.12
SGF11YPL047W YPT1P01123 206 aaKnown RBP1.79□□□□□ -2.12
SGF11YPL047W PCK1P10963 549 aa1.79□□□□□ -2.12
SGF11YPL047W YCR043CP25361 127 aa1.79□□□□□ -2.12
SGF11YPL047W SFP1P32432 683 aa1.79□□□□□ -2.12
SGF11YPL047W DSS4P32601 143 aa1.79□□□□□ -2.12
SGF11YPL047W MTC7P32633 139 aa1.79□□□□□ -2.12
SGF11YPL047W IMD2P38697 523 aaKnown RBP1.79□□□□□ -2.12
SGF11YPL047W TOM71P38825 639 aaKnown RBP1.79□□□□□ -2.12
SGF11YPL047W TES1P41903 349 aaKnown RBP1.79□□□□□ -2.12
SGF11YPL047W IMD3P50095 523 aaKnown RBP1.79□□□□□ -2.12
SGF11YPL047W SQS1P53866 767 aaKnown RBP1.79□□□□□ -2.12
SGF11YPL047W VTC3Q02725 835 aa1.79□□□□□ -2.12
SGF11YPL047W YHM2Q04013 314 aa1.79□□□□□ -2.12
SGF11YPL047W RAD33Q04231 177 aa1.79□□□□□ -2.12
SGF11YPL047W MAK32P23060 363 aa1.78□□□□□ -2.12
SGF11YPL047W DGR2P32330 852 aa1.78□□□□□ -2.12
SGF11YPL047W MF(ALPHA)2P32435 120 aa1.78□□□□□ -2.12
SGF11YPL047W PRP19P32523 503 aaKnown RBP1.78□□□□□ -2.12
SGF11YPL047W GDA1P32621 518 aa1.78□□□□□ -2.12
SGF11YPL047W ARC40P38328 384 aaKnown RBP1.78□□□□□ -2.12
SGF11YPL047W RRP8P38961 392 aaKnown RBP1.78□□□□□ -2.12
SGF11YPL047W MET30P39014 640 aa1.78□□□□□ -2.12
SGF11YPL047W RAD26P40352 1085 aa1.78□□□□□ -2.12
SGF11YPL047W YIL169CP40442 995 aa1.78□□□□□ -2.12
SGF11YPL047W YIL152WP40455 235 aa1.78□□□□□ -2.12
SGF11YPL047W VID28P40547 921 aa1.78□□□□□ -2.12
SGF11YPL047W CIN1P40987 1014 aa1.78□□□□□ -2.12
SGF11YPL047W SAD1P43589 448 aa1.78□□□□□ -2.12
SGF11YPL047W YJR096WP47137 282 aa1.78□□□□□ -2.12
SGF11YPL047W COG2P53271 262 aa1.78□□□□□ -2.12
SGF11YPL047W PTA1Q01329 785 aaPredicted RBP1.78□□□□□ -2.12
SGF11YPL047W GAL4P04386 881 aa1.77□□□□□ -2.13
SGF11YPL047W CDC5P32562 705 aa1.77□□□□□ -2.13
SGF11YPL047W OAF3P36023 863 aa1.77□□□□□ -2.13
SGF11YPL047W SDS24P38314 527 aa1.77□□□□□ -2.13
SGF11YPL047W DED81P38707 554 aaKnown RBP1.77□□□□□ -2.13
SGF11YPL047W HXT6P39003 570 aaKnown RBP1.77□□□□□ -2.13
SGF11YPL047W HXT7P39004 570 aa1.77□□□□□ -2.13
SGF11YPL047W VRG4P40107 337 aa1.77□□□□□ -2.13
SGF11YPL047W LAS21P40367 830 aa1.77□□□□□ -2.13
SGF11YPL047W YMR034CQ05131 434 aaPredicted RBP1.77□□□□□ -2.13
SGF11YPL047W CDC26P14724 124 aa1.76□□□□□ -2.13
SGF11YPL047W AEP2P22136 580 aa1.76□□□□□ -2.13
SGF11YPL047W RMA1P36001 430 aaKnown RBP1.76□□□□□ -2.13
SGF11YPL047W FMP46P36141 133 aaKnown RBP1.76□□□□□ -2.13
SGF11YPL047W FAT1P38225 669 aa1.76□□□□□ -2.13
SGF11YPL047W YPT11P48559 417 aa1.76□□□□□ -2.13
SGF11YPL047W MDR1P53258 950 aa1.76□□□□□ -2.13
SGF11YPL047W ECM9Q02202 377 aa1.76□□□□□ -2.13
SGF11YPL047W ECM22Q05958 814 aaPredicted RBP1.76□□□□□ -2.13
SGF11YPL047W MLH2Q07980 695 aa1.76□□□□□ -2.13
SGF11YPL047W PFA4Q12006 378 aa1.76□□□□□ -2.13
SGF11YPL047W HFI1Q12060 488 aa1.76□□□□□ -2.13
SGF11YPL047W GET3Q12154 354 aaKnown RBP1.76□□□□□ -2.13
SGF11YPL047W RRI1Q12468 440 aa1.76□□□□□ -2.13
SGF11YPL047W RTC1Q08281 1341 aa1.75□□□□□ -2.13
SGF11YPL047W SEC18P18759 758 aaKnown RBP1.75□□□□□ -2.13
SGF11YPL047W CBP3P21560 335 aa1.75□□□□□ -2.13
SGF11YPL047W SDH8P38345 138 aa1.75□□□□□ -2.13
SGF11YPL047W OCA5P38738 679 aa1.75□□□□□ -2.13
SGF11YPL047W MAM1P40065 302 aa1.75□□□□□ -2.13
SGF11YPL047W NOP2P40991 618 aaKnown RBP1.75□□□□□ -2.13
SGF11YPL047W SKP2P42843 763 aa1.75□□□□□ -2.13
SGF11YPL047W GZF3P42944 551 aaKnown RBP1.75□□□□□ -2.13
SGF11YPL047W YNL144CP53907 740 aa1.75□□□□□ -2.13
SGF11YPL047W YNL092WP53934 400 aa1.75□□□□□ -2.13
SGF11YPL047W YMR317WQ04893 1140 aa1.75□□□□□ -2.13
SGF11YPL047W RTT103Q05543 409 aa1.75□□□□□ -2.13
SGF11YPL047W APM4Q99186 491 aa1.75□□□□□ -2.13
SGF11YPL047W CHO2P05374 869 aaKnown RBP1.74□□□□□ -2.13
SGF11YPL047W RPS21AP0C0V8 87 aaKnown RBP1.74□□□□□ -2.13
SGF11YPL047W RPL8AP17076 256 aaKnown RBP1.74□□□□□ -2.13
SGF11YPL047W CNA1P23287 553 aa1.74□□□□□ -2.13
SGF11YPL047W RRP43P25359 394 aaPredicted RBP1.74□□□□□ -2.13
SGF11YPL047W PPZ1P26570 692 aa1.74□□□□□ -2.13
SGF11YPL047W PLC1P32383 869 aa1.74□□□□□ -2.13
SGF11YPL047W KES1P35844 434 aaKnown RBP1.74□□□□□ -2.13
SGF11YPL047W DID4P36108 232 aa1.74□□□□□ -2.13
SGF11YPL047W YBR139WP38109 508 aa1.74□□□□□ -2.13
SGF11YPL047W PEF1P53238 335 aa1.74□□□□□ -2.13
SGF11YPL047W UBP16Q02863 499 aa1.74□□□□□ -2.13
SGF11YPL047W PLM2Q04383 521 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms