RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W DIM1P41819 318 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W ELP2P42935 788 aa3.86□□□□□ -1.79
ABP140YOR239W YJL049WP47048 450 aa3.86□□□□□ -1.79
ABP140YOR239W LYS4P49367 693 aaPredicted RBP3.86□□□□□ -1.79
ABP140YOR239W RMR1P53060 241 aa3.86□□□□□ -1.79
ABP140YOR239W CUE3P53137 624 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W YGL108CP53139 140 aa3.86□□□□□ -1.79
ABP140YOR239W UTP8P53276 713 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W MRPL50P53724 139 aa3.86□□□□□ -1.79
ABP140YOR239W OSH6Q02201 448 aa3.86□□□□□ -1.79
ABP140YOR239W UME1Q03010 460 aa3.86□□□□□ -1.79
ABP140YOR239W RRP17Q04031 235 aaPredicted RBP3.86□□□□□ -1.79
ABP140YOR239W SMP3Q04174 516 aa3.86□□□□□ -1.79
ABP140YOR239W TOS4Q06266 489 aa3.86□□□□□ -1.79
ABP140YOR239W YDL124WQ07551 312 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W ADY3Q07732 790 aa3.86□□□□□ -1.79
ABP140YOR239W MLH2Q07980 695 aa3.86□□□□□ -1.79
ABP140YOR239W YPR204WQ08995 1032 aa3.86□□□□□ -1.79
ABP140YOR239W SPE3Q12074 293 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W DBP10Q12389 995 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W ERP4Q12450 207 aa3.86□□□□□ -1.79
ABP140YOR239W ATP6P00854 259 aa3.86□□□□□ -1.79
ABP140YOR239W MF(ALPHA)1P01149 165 aa3.86□□□□□ -1.79
ABP140YOR239W PPR1P07272 904 aaPredicted RBP3.86□□□□□ -1.79
ABP140YOR239W GLN4P13188 809 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W SEC18P18759 758 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W PUP1P25043 261 aa3.86□□□□□ -1.79
ABP140YOR239W RVS161P25343 265 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W GBP2P25555 427 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
ABP140YOR239W PDC6P26263 563 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W SPC42P36094 363 aa3.86□□□□□ -1.79
ABP140YOR239W MET1P36150 593 aa3.86□□□□□ -1.79
ABP140YOR239W NAT2P37293 288 aa3.86□□□□□ -1.79
ABP140YOR239W ETR1P38071 380 aa3.86□□□□□ -1.79
ABP140YOR239W YBR032WP38223 100 aa3.86□□□□□ -1.79
ABP140YOR239W SLM4P38247 162 aa3.86□□□□□ -1.79
ABP140YOR239W MIP6P38760 659 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W VMA7P39111 118 aa3.86□□□□□ -1.79
ABP140YOR239W ALD5P40047 520 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W RRN7P40992 514 aa3.86□□□□□ -1.79
ABP140YOR239W IRC5P43610 853 aa3.86□□□□□ -1.79
ABP140YOR239W YJL181WP46987 611 aa3.86□□□□□ -1.79
ABP140YOR239W TAF6P53040 516 aa3.86□□□□□ -1.79
ABP140YOR239W CGR1P53188 120 aa3.86□□□□□ -1.79
ABP140YOR239W CLU1Q03690 1277 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W NSE5Q03718 556 aa3.86□□□□□ -1.79
ABP140YOR239W RPN9Q04062 393 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W EAF1Q06337 982 aa3.86□□□□□ -1.79
ABP140YOR239W PEX15Q08215 383 aa3.86□□□□□ -1.79
ABP140YOR239W GYP1Q08484 637 aa3.86□□□□□ -1.79
ABP140YOR239W PUS7Q08647 676 aaKnown RBP3.86□□□□□ -1.79
ABP140YOR239W RCN2Q12044 265 aa3.86□□□□□ -1.79
ABP140YOR239W DAS2Q12084 232 aa3.86□□□□□ -1.79
ABP140YOR239W APM4Q99186 491 aa3.86□□□□□ -1.79
ABP140YOR239W YPT6Q99260 215 aa3.86□□□□□ -1.79
ABP140YOR239W RAD61Q99359 647 aa3.86□□□□□ -1.79
ABP140YOR239W VCX1Q99385 411 aa3.86□□□□□ -1.79
ABP140YOR239W FAS2P19097 1887 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W RPS17AP02407 136 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W CDC24P11433 854 aaPredicted RBP3.85□□□□□ -1.79
ABP140YOR239W RPS17BP14127 136 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W PRP9P19736 530 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W CLN2P20438 545 aa3.85□□□□□ -1.79
ABP140YOR239W ATP12P22135 325 aa3.85□□□□□ -1.79
ABP140YOR239W HXT2P23585 541 aa3.85□□□□□ -1.79
ABP140YOR239W KRE2P27809 442 aa3.85□□□□□ -1.79
ABP140YOR239W ISF1P32488 338 aa3.85□□□□□ -1.79
ABP140YOR239W TYE7P33122 291 aaPredicted RBP3.85□□□□□ -1.79
ABP140YOR239W YKL050CP35736 922 aa3.85□□□□□ -1.79
ABP140YOR239W STB6P36085 766 aa3.85□□□□□ -1.79
ABP140YOR239W NTR2P36118 322 aaPredicted RBP3.85□□□□□ -1.79
ABP140YOR239W UTP30P36144 274 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W BAP2P38084 609 aa3.85□□□□□ -1.79
ABP140YOR239W BCD1P38772 366 aa3.85□□□□□ -1.79
ABP140YOR239W SEC31P38968 1273 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W EDC3P39998 551 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W YJL070CP40361 888 aa3.85□□□□□ -1.79
ABP140YOR239W YIL077CP40508 320 aa3.85□□□□□ -1.79
ABP140YOR239W YGR237CP50089 785 aa3.85□□□□□ -1.79
ABP140YOR239W MET13P53128 600 aa3.85□□□□□ -1.79
ABP140YOR239W DRN1P53255 507 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W CPR6P53691 371 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W GOR1P53839 350 aa3.85□□□□□ -1.79
ABP140YOR239W ORC3P54790 616 aa3.85□□□□□ -1.79
ABP140YOR239W YPL034WQ03083 165 aa3.85□□□□□ -1.79
ABP140YOR239W ARX1Q03862 593 aaKnown RBP3.85□□□□□ -1.79
ABP140YOR239W PNP1Q05788 311 aa3.85□□□□□ -1.79
ABP140YOR239W ECI1Q05871 280 aa3.85□□□□□ -1.79
ABP140YOR239W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
ABP140YOR239W RTR2Q12378 196 aa3.85□□□□□ -1.79
ABP140YOR239W ADR1P07248 1323 aa3.85□□□□□ -1.79
ABP140YOR239W YGL041W-AP0C5N3 154 aa3.84□□□□□ -1.79
ABP140YOR239W HSF1P10961 833 aa3.84□□□□□ -1.79
ABP140YOR239W POL3P15436 1097 aa3.84□□□□□ -1.79
ABP140YOR239W MRPL33P20084 86 aa3.84□□□□□ -1.79
ABP140YOR239W ICL1P28240 557 aaPredicted RBP3.84□□□□□ -1.79
ABP140YOR239W GRE3P38715 327 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
ABP140YOR239W OCA5P38738 679 aa3.84□□□□□ -1.79
ABP140YOR239W KEL1P38853 1164 aaKnown RBP3.84□□□□□ -1.79
ABP140YOR239W BFR1P38934 470 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms