RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SGS1YMR190C HOP2P53187 214 aa2.6□□□□□ -1.99
SGS1YMR190C SPC98P53540 846 aa2.6□□□□□ -1.99
SGS1YMR190C SWS2P53937 143 aa2.6□□□□□ -1.99
SGS1YMR190C VMS1Q04311 632 aaKnown RBP2.6□□□□□ -1.99
SGS1YMR190C YML082WQ04533 649 aaKnown RBP2.6□□□□□ -1.99
SGS1YMR190C SMD2Q06217 110 aaKnown RBP2.6□□□□□ -1.99
SGS1YMR190C RLP24Q07915 199 aaKnown RBP2.6□□□□□ -1.99
SGS1YMR190C SPO12P17123 173 aa2.6□□□□□ -1.99
SGS1YMR190C DPB3P27344 201 aa2.6□□□□□ -1.99
SGS1YMR190C YJU2P28320 278 aaPredicted RBP2.6□□□□□ -1.99
SGS1YMR190C TRK2P28584 889 aa2.6□□□□□ -1.99
SGS1YMR190C YEL043WP32618 956 aa2.6□□□□□ -1.99
SGS1YMR190C PEX5P35056 612 aa2.6□□□□□ -1.99
SGS1YMR190C PCM1P38628 557 aaKnown RBP2.6□□□□□ -1.99
SGS1YMR190C MMS21P38632 267 aa2.6□□□□□ -1.99
SGS1YMR190C SET5P38890 526 aaKnown RBP2.6□□□□□ -1.99
SGS1YMR190C LCB2P40970 561 aa2.6□□□□□ -1.99
SGS1YMR190C GUF1P46943 645 aa2.6□□□□□ -1.99
SGS1YMR190C ZAP1P47043 880 aa2.6□□□□□ -1.99
SGS1YMR190C PUS2P53167 370 aa2.6□□□□□ -1.99
SGS1YMR190C YGR273CP53329 174 aa2.6□□□□□ -1.99
SGS1YMR190C YMR178WQ03219 274 aaKnown RBP2.6□□□□□ -1.99
SGS1YMR190C MZM1Q03429 123 aaPredicted RBP2.6□□□□□ -1.99
SGS1YMR190C TRM82Q03774 444 aa2.6□□□□□ -1.99
SGS1YMR190C TEC1P18412 486 aa2.59□□□□□ -1.99
SGS1YMR190C DAL81P21657 970 aa2.59□□□□□ -1.99
SGS1YMR190C ADY2P25613 283 aa2.59□□□□□ -1.99
SGS1YMR190C SEC65P29478 273 aa2.59□□□□□ -1.99
SGS1YMR190C PSO2P30620 661 aa2.59□□□□□ -1.99
SGS1YMR190C CRM1P30822 1084 aaKnown RBP2.59□□□□□ -1.99
SGS1YMR190C SLA2P33338 968 aa2.59□□□□□ -1.99
SGS1YMR190C VID24P38263 362 aa2.59□□□□□ -1.99
SGS1YMR190C TDA3P38758 523 aa2.59□□□□□ -1.99
SGS1YMR190C MNN11P46985 422 aaKnown RBP2.59□□□□□ -1.99
SGS1YMR190C CTR1P49573 406 aa2.59□□□□□ -1.99
SGS1YMR190C SAP4P53036 818 aa2.59□□□□□ -1.99
SGS1YMR190C PEX31P53203 462 aa2.59□□□□□ -1.99
SGS1YMR190C PDR16P53860 351 aaKnown RBP2.59□□□□□ -1.99
SGS1YMR190C ROD1Q02805 837 aa2.59□□□□□ -1.99
SGS1YMR190C AIM33Q04516 312 aa2.59□□□□□ -1.99
SGS1YMR190C CWC2Q12046 339 aaPredicted RBP2.59□□□□□ -1.99
SGS1YMR190C APM4Q99186 491 aa2.59□□□□□ -1.99
SGS1YMR190C EST1P17214 699 aaPredicted RBP2.59□□□□□ -1.99
SGS1YMR190C MNE1P24720 663 aa2.59□□□□□ -1.99
SGS1YMR190C ATG3P40344 310 aa2.59□□□□□ -1.99
SGS1YMR190C SEC9P40357 651 aa2.59□□□□□ -1.99
SGS1YMR190C CCT8P47079 568 aaKnown RBP2.59□□□□□ -1.99
SGS1YMR190C VPS70P47161 811 aa2.59□□□□□ -1.99
SGS1YMR190C GUP1P53154 560 aa2.59□□□□□ -1.99
SGS1YMR190C BTN2P53286 410 aa2.59□□□□□ -1.99
SGS1YMR190C RPL34AP87262 121 aaPredicted RBP2.59□□□□□ -1.99
SGS1YMR190C RPA49Q01080 415 aaPredicted RBP2.59□□□□□ -1.99
SGS1YMR190C SMA1Q02651 245 aa2.59□□□□□ -1.99
SGS1YMR190C PNG1Q02890 363 aa2.59□□□□□ -1.99
SGS1YMR190C COQ9Q05779 260 aa2.59□□□□□ -1.99
SGS1YMR190C PMT7Q06644 662 aa2.59□□□□□ -1.99
SGS1YMR190C ADY3Q07732 790 aa2.59□□□□□ -1.99
SGS1YMR190C PSR2Q07949 397 aa2.59□□□□□ -1.99
SGS1YMR190C DAS2Q12084 232 aa2.59□□□□□ -1.99
SGS1YMR190C TUF1P02992 437 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C PHO2P07269 559 aa2.59□□□□□ -2
SGS1YMR190C KAR1P11927 433 aa2.59□□□□□ -2
SGS1YMR190C RRT12P25381 491 aa2.59□□□□□ -2
SGS1YMR190C CWP1P28319 239 aa2.59□□□□□ -2
SGS1YMR190C SEC6P32844 805 aa2.59□□□□□ -2
SGS1YMR190C YEL1P34225 687 aa2.59□□□□□ -2
SGS1YMR190C TCD1P38756 429 aa2.59□□□□□ -2
SGS1YMR190C CIN4P39110 191 aa2.59□□□□□ -2
SGS1YMR190C DPH1P40487 425 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C MAD1P40957 749 aa2.59□□□□□ -2
SGS1YMR190C PRP24P49960 444 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C SDA1P53313 767 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C TDA7P53882 636 aaPredicted RBP2.59□□□□□ -2
SGS1YMR190C ESBP6P53918 673 aa2.59□□□□□ -2
SGS1YMR190C STE20Q03497 939 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C YDR444WQ04093 687 aa2.59□□□□□ -2
SGS1YMR190C YPL277CQ08989 487 aa2.59□□□□□ -2
SGS1YMR190C CKI1P20485 582 aa2.59□□□□□ -2
SGS1YMR190C SCL1P21243 252 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C CLB1P24868 471 aa2.59□□□□□ -2
SGS1YMR190C APL1P27351 700 aa2.59□□□□□ -2
SGS1YMR190C YSC83P32792 385 aa2.59□□□□□ -2
SGS1YMR190C STO1P34160 861 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C YMC2P38087 329 aa2.59□□□□□ -2
SGS1YMR190C RFS1P38234 210 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C PIH1P38768 344 aa2.59□□□□□ -2
SGS1YMR190C HEM14P40012 539 aa2.59□□□□□ -2
SGS1YMR190C MVP1P40959 511 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C CEG1Q01159 459 aaPredicted RBP2.59□□□□□ -2
SGS1YMR190C MUB1Q03162 620 aa2.59□□□□□ -2
SGS1YMR190C DON1Q05610 365 aa2.59□□□□□ -2
SGS1YMR190C NOP6Q07623 225 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C NOP58Q12499 511 aaKnown RBP2.59□□□□□ -2
SGS1YMR190C YPT1P01123 206 aaKnown RBP2.58□□□□□ -2
SGS1YMR190C CDC37P06101 506 aaKnown RBP2.58□□□□□ -2
SGS1YMR190C ERG11P10614 530 aa2.58□□□□□ -2
SGS1YMR190C REV1P12689 985 aa2.58□□□□□ -2
SGS1YMR190C COX11P19516 300 aaKnown RBP2.58□□□□□ -2
SGS1YMR190C GBP2P25555 427 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms