RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
DDR48YMR173W YLR111WQ12528 110 aa3.32□□□□□ -1.88
DDR48YMR173W CDC5P32562 705 aa3.31□□□□□ -1.88
DDR48YMR173W SER1P33330 395 aaKnown RBP3.31□□□□□ -1.88
DDR48YMR173W ASK1P35734 292 aa3.31□□□□□ -1.88
DDR48YMR173W SPC97P38863 823 aa3.31□□□□□ -1.88
DDR48YMR173W CCT4P39078 528 aaKnown RBP3.31□□□□□ -1.88
DDR48YMR173W PCI8P40512 444 aa3.31□□□□□ -1.88
DDR48YMR173W SAE2P46946 345 aa3.31□□□□□ -1.88
DDR48YMR173W NIT2P47016 307 aa3.31□□□□□ -1.88
DDR48YMR173W SQS1P53866 767 aaKnown RBP3.31□□□□□ -1.88
DDR48YMR173W YNL092WP53934 400 aa3.31□□□□□ -1.88
DDR48YMR173W HRD3Q05787 833 aa3.31□□□□□ -1.88
DDR48YMR173W YPR027CQ12079 277 aa3.31□□□□□ -1.88
DDR48YMR173W RMP1Q12530 201 aa3.31□□□□□ -1.88
DDR48YMR173W YEL076C-AP0CX16 216 aa3.3□□□□□ -1.88
DDR48YMR173W YLR464WP0CX17 216 aa3.3□□□□□ -1.88
DDR48YMR173W SEC12P11655 471 aa3.3□□□□□ -1.88
DDR48YMR173W SSP120P39931 234 aaKnown RBP3.3□□□□□ -1.88
DDR48YMR173W YEL076CP39971 216 aa3.3□□□□□ -1.88
DDR48YMR173W MNT3P40549 630 aa3.3□□□□□ -1.88
DDR48YMR173W MAF1P41910 395 aa3.3□□□□□ -1.88
DDR48YMR173W MTD1Q02046 320 aaKnown RBP3.3□□□□□ -1.88
DDR48YMR173W SEC3P33332 1336 aaKnown RBP3.29□□□□□ -1.88
DDR48YMR173W SDH8P38345 138 aa3.29□□□□□ -1.88
DDR48YMR173W UBP12P39538 1254 aa3.29□□□□□ -1.88
DDR48YMR173W MNT2P53059 558 aa3.29□□□□□ -1.88
DDR48YMR173W LSC1P53598 329 aaKnown RBP3.29□□□□□ -1.88
DDR48YMR173W CET1O13297 549 aaPredicted RBP3.28□□□□□ -1.88
DDR48YMR173W NOP1P15646 327 aaKnown RBP3.28□□□□□ -1.88
DDR48YMR173W BET2P20133 325 aa3.28□□□□□ -1.88
DDR48YMR173W URE2P23202 354 aaKnown RBP3.28□□□□□ -1.88
DDR48YMR173W DAL3P32459 195 aa3.28□□□□□ -1.88
DDR48YMR173W RRP8P38961 392 aaKnown RBP3.28□□□□□ -1.88
DDR48YMR173W PEA2P40091 420 aa3.28□□□□□ -1.88
DDR48YMR173W YNL058CP53947 316 aa3.28□□□□□ -1.88
DDR48YMR173W YOR378WQ08902 515 aa3.28□□□□□ -1.88
DDR48YMR173W CRC1Q12289 327 aa3.28□□□□□ -1.88
DDR48YMR173W CHO2P05374 869 aaKnown RBP3.27□□□□□ -1.89
DDR48YMR173W YPK1P12688 680 aaKnown RBP3.27□□□□□ -1.89
DDR48YMR173W GCS1P35197 352 aa3.27□□□□□ -1.89
DDR48YMR173W JHD1P40034 492 aa3.27□□□□□ -1.89
DDR48YMR173W EMP65P40085 556 aa3.27□□□□□ -1.89
DDR48YMR173W CYK3Q07533 885 aa3.27□□□□□ -1.89
DDR48YMR173W AHA1Q12449 350 aaKnown RBP3.27□□□□□ -1.89
DDR48YMR173W PCK1P10963 549 aa3.26□□□□□ -1.89
DDR48YMR173W KGD2P19262 463 aaPredicted RBP3.26□□□□□ -1.89
DDR48YMR173W ARG1P22768 420 aa3.26□□□□□ -1.89
DDR48YMR173W MAK32P23060 363 aa3.26□□□□□ -1.89
DDR48YMR173W HEM12P32347 362 aaPredicted RBP3.26□□□□□ -1.89
DDR48YMR173W LAS21P40367 830 aa3.26□□□□□ -1.89
DDR48YMR173W YIL092WP40497 633 aa3.26□□□□□ -1.89
DDR48YMR173W CFD1P40558 293 aa3.26□□□□□ -1.89
DDR48YMR173W MAD2P40958 196 aa3.26□□□□□ -1.89
DDR48YMR173W RAD33Q04231 177 aa3.26□□□□□ -1.89
DDR48YMR173W DIN7Q12086 430 aa3.26□□□□□ -1.89
DDR48YMR173W YPT1P01123 206 aaKnown RBP3.25□□□□□ -1.89
DDR48YMR173W URA3P03962 267 aa3.25□□□□□ -1.89
DDR48YMR173W YER190C-BP0CX94 160 aa3.25□□□□□ -1.89
DDR48YMR173W YEL077W-AP0CX95 160 aa3.25□□□□□ -1.89
DDR48YMR173W YGR296C-BP0CX96 160 aa3.25□□□□□ -1.89
DDR48YMR173W YPL283W-BP0CX97 160 aa3.25□□□□□ -1.89
DDR48YMR173W YPR204C-AP0CX98 160 aa3.25□□□□□ -1.89
DDR48YMR173W COX11P19516 300 aaKnown RBP3.25□□□□□ -1.89
DDR48YMR173W PLC1P32383 869 aa3.25□□□□□ -1.89
DDR48YMR173W PET309P32522 965 aaPredicted RBP3.25□□□□□ -1.89
DDR48YMR173W STL1P39932 569 aa3.25□□□□□ -1.89
DDR48YMR173W MAM1P40065 302 aa3.25□□□□□ -1.89
DDR48YMR173W NOP2P40991 618 aaKnown RBP3.25□□□□□ -1.89
DDR48YMR173W CIR1P42940 261 aa3.25□□□□□ -1.89
DDR48YMR173W PUS4P48567 403 aaKnown RBP3.25□□□□□ -1.89
DDR48YMR173W COS12P53053 380 aa3.25□□□□□ -1.89
DDR48YMR173W SLD3P53135 668 aa3.25□□□□□ -1.89
DDR48YMR173W HOL1P53389 586 aa3.25□□□□□ -1.89
DDR48YMR173W NUP53Q03790 475 aa3.25□□□□□ -1.89
DDR48YMR173W TRI1Q05024 226 aa3.25□□□□□ -1.89
DDR48YMR173W ENT2Q05785 613 aa3.25□□□□□ -1.89
DDR48YMR173W TPO3Q06451 622 aa3.25□□□□□ -1.89
DDR48YMR173W PEX15Q08215 383 aa3.25□□□□□ -1.89
DDR48YMR173W TRE2Q08693 809 aa3.25□□□□□ -1.89
DDR48YMR173W CWC2Q12046 339 aaPredicted RBP3.25□□□□□ -1.89
DDR48YMR173W RTK1Q12100 620 aaPredicted RBP3.25□□□□□ -1.89
DDR48YMR173W LCB4Q12246 624 aa3.25□□□□□ -1.89
DDR48YMR173W Q0010Q9ZZX9 128 aa3.25□□□□□ -1.89
DDR48YMR173W BI2P03873 423 aa3.24□□□□□ -1.89
DDR48YMR173W YAP1P19880 650 aaKnown RBP3.24□□□□□ -1.89
DDR48YMR173W GDA1P32621 518 aa3.24□□□□□ -1.89
DDR48YMR173W KES1P35844 434 aaKnown RBP3.24□□□□□ -1.89
DDR48YMR173W YBR071WP38243 211 aa3.24□□□□□ -1.89
DDR48YMR173W IRC7P43623 340 aa3.24□□□□□ -1.89
DDR48YMR173W SPC105P53148 917 aa3.24□□□□□ -1.89
DDR48YMR173W MDR1P53258 950 aa3.24□□□□□ -1.89
DDR48YMR173W COP1P53622 1201 aaKnown RBP3.24□□□□□ -1.89
DDR48YMR173W YNR071CP53757 342 aa3.24□□□□□ -1.89
DDR48YMR173W YPR089WO13585 888 aa3.23□□□□□ -1.89
DDR48YMR173W YMR085WP0CF18 432 aa3.23□□□□□ -1.89
DDR48YMR173W FTH1P38310 465 aa3.23□□□□□ -1.89
DDR48YMR173W VPS8P39702 1274 aa3.23□□□□□ -1.89
DDR48YMR173W EAF5P39995 279 aa3.23□□□□□ -1.89
DDR48YMR173W GSM1P42950 618 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms