RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W NOG2P53742 486 aaKnown RBP7.88□□□□□ -1.15
NUP53YMR153W YNL247WP53852 767 aaKnown RBP7.88□□□□□ -1.15
NUP53YMR153W ENO1P00924 437 aaKnown RBP7.87□□□□□ -1.15
NUP53YMR153W SEC63P14906 663 aa7.87□□□□□ -1.15
NUP53YMR153W PYC2P32327 1180 aaKnown RBP7.87□□□□□ -1.15
NUP53YMR153W BLI1P35727 113 aa7.87□□□□□ -1.15
NUP53YMR153W ASG1P40467 964 aa7.87□□□□□ -1.15
NUP53YMR153W SER33P40510 469 aa7.87□□□□□ -1.15
NUP53YMR153W REF2P42073 533 aaPredicted RBP7.87□□□□□ -1.15
NUP53YMR153W ATG16Q03818 150 aa7.87□□□□□ -1.15
NUP53YMR153W YLR046CQ12253 270 aa7.87□□□□□ -1.15
NUP53YMR153W GFA1P14742 717 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W CCR4P31384 837 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W TYE7P33122 291 aaPredicted RBP7.86□□□□□ -1.15
NUP53YMR153W SRX1P36077 127 aa7.86□□□□□ -1.15
NUP53YMR153W RRT2P38332 387 aa7.86□□□□□ -1.15
NUP53YMR153W BAT1P38891 393 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W YEL028WP39989 153 aa7.86□□□□□ -1.15
NUP53YMR153W RRT5P43607 289 aa7.86□□□□□ -1.15
NUP53YMR153W MNN11P46985 422 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W AQR1P53943 586 aa7.86□□□□□ -1.15
NUP53YMR153W PIR1Q03178 341 aa7.86□□□□□ -1.15
NUP53YMR153W HEL2Q05580 639 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W GRX8Q05926 109 aa7.86□□□□□ -1.15
NUP53YMR153W PER33Q12144 273 aa7.86□□□□□ -1.15
NUP53YMR153W SEY1Q99287 776 aa7.86□□□□□ -1.15
NUP53YMR153W IZH4Q99393 312 aa7.86□□□□□ -1.15
NUP53YMR153W UBR1P19812 1950 aa7.86□□□□□ -1.15
NUP53YMR153W SST2P11972 698 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W GEX1P25596 615 aa7.86□□□□□ -1.15
NUP53YMR153W MCM2P29469 868 aa7.86□□□□□ -1.15
NUP53YMR153W HXT3P32466 567 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W RML2P32611 393 aa7.86□□□□□ -1.15
NUP53YMR153W GEX2P36173 615 aa7.86□□□□□ -1.15
NUP53YMR153W ERP2P39704 215 aa7.86□□□□□ -1.15
NUP53YMR153W OSW7P43611 510 aa7.86□□□□□ -1.15
NUP53YMR153W RPS10BP46784 105 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W TRF5P48561 642 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W BRO1P48582 844 aa7.86□□□□□ -1.15
NUP53YMR153W ASN2P49090 572 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W INP2Q03824 705 aa7.86□□□□□ -1.15
NUP53YMR153W UFO1Q04511 668 aa7.86□□□□□ -1.15
NUP53YMR153W VPS38Q05919 439 aa7.86□□□□□ -1.15
NUP53YMR153W YLR001CQ07895 862 aa7.86□□□□□ -1.15
NUP53YMR153W RPS10AQ08745 105 aaPredicted RBP7.86□□□□□ -1.15
NUP53YMR153W PIN2Q12057 282 aa7.86□□□□□ -1.15
NUP53YMR153W EFG1Q3E705 233 aaKnown RBP7.86□□□□□ -1.15
NUP53YMR153W AFI1Q99222 893 aa7.86□□□□□ -1.15
NUP53YMR153W MIS1P09440 975 aaKnown RBP7.85□□□□□ -1.15
NUP53YMR153W ERG11P10614 530 aa7.85□□□□□ -1.15
NUP53YMR153W PDR1P12383 1068 aa7.85□□□□□ -1.15
NUP53YMR153W MEI4P29467 408 aa7.85□□□□□ -1.15
NUP53YMR153W KAR9P32526 644 aa7.85□□□□□ -1.15
NUP53YMR153W TFB1P32776 642 aa7.85□□□□□ -1.15
NUP53YMR153W FUI1P38196 639 aa7.85□□□□□ -1.15
NUP53YMR153W BIT2P38346 545 aa7.85□□□□□ -1.15
NUP53YMR153W YHR078WP38799 552 aa7.85□□□□□ -1.15
NUP53YMR153W KTR7P40504 517 aa7.85□□□□□ -1.15
NUP53YMR153W YJL132WP47014 750 aa7.85□□□□□ -1.15
NUP53YMR153W COQ5P49017 307 aa7.85□□□□□ -1.15
NUP53YMR153W EMC4P53073 190 aa7.85□□□□□ -1.15
NUP53YMR153W AIM14P53109 570 aa7.85□□□□□ -1.15
NUP53YMR153W YGR127WP53275 312 aa7.85□□□□□ -1.15
NUP53YMR153W SOV1Q04748 898 aa7.85□□□□□ -1.15
NUP53YMR153W YDR278CQ05612 105 aa7.85□□□□□ -1.15
NUP53YMR153W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
NUP53YMR153W TPO1Q07824 586 aa7.85□□□□□ -1.15
NUP53YMR153W OPI10Q08202 246 aa7.85□□□□□ -1.15
NUP53YMR153W DAS2Q12084 232 aa7.85□□□□□ -1.15
NUP53YMR153W GPM3Q12326 303 aa7.85□□□□□ -1.15
NUP53YMR153W PEX11Q12462 236 aa7.85□□□□□ -1.15
NUP53YMR153W CLC1P17891 233 aa7.84□□□□□ -1.15
NUP53YMR153W MIH1P23748 554 aa7.84□□□□□ -1.15
NUP53YMR153W RAD57P25301 460 aa7.84□□□□□ -1.15
NUP53YMR153W MRS6P32864 603 aaKnown RBP7.84□□□□□ -1.15
NUP53YMR153W MPE1P35728 441 aaKnown RBP7.84□□□□□ -1.15
NUP53YMR153W APM3P38153 483 aa7.84□□□□□ -1.15
NUP53YMR153W PMC1P38929 1173 aaPredicted RBP7.84□□□□□ -1.15
NUP53YMR153W TCB2P48231 1178 aa7.84□□□□□ -1.15
NUP53YMR153W PRM1P53835 661 aa7.84□□□□□ -1.15
NUP53YMR153W VPS9P54787 451 aa7.84□□□□□ -1.15
NUP53YMR153W KAP95Q06142 861 aaKnown RBP7.84□□□□□ -1.15
NUP53YMR153W YDL129WQ07555 291 aa7.84□□□□□ -1.15
NUP53YMR153W MRPL8P22353 238 aa7.83□□□□□ -1.16
NUP53YMR153W AIM26P32858 118 aa7.83□□□□□ -1.16
NUP53YMR153W LIP5P32875 414 aa7.83□□□□□ -1.16
NUP53YMR153W YBL055CP34220 418 aaPredicted RBP7.83□□□□□ -1.16
NUP53YMR153W DLD2P46681 530 aaKnown RBP7.83□□□□□ -1.16
NUP53YMR153W KAP114P53067 1004 aa7.83□□□□□ -1.16
NUP53YMR153W COG7P53195 279 aa7.83□□□□□ -1.16
NUP53YMR153W YTP1P53584 459 aa7.83□□□□□ -1.16
NUP53YMR153W NRD1P53617 575 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16 RIP-Chip
NUP53YMR153W DIG1Q03063 452 aaKnown RBP7.83□□□□□ -1.16
NUP53YMR153W SWC7Q06707 132 aa7.83□□□□□ -1.16
NUP53YMR153W APL5Q08951 932 aaKnown RBP7.83□□□□□ -1.16
NUP53YMR153W PMS1P14242 873 aa7.82□□□□□ -1.16
NUP53YMR153W SEC23P15303 768 aaKnown RBP7.82□□□□□ -1.16
NUP53YMR153W PCH2P38126 564 aa7.82□□□□□ -1.16
NUP53YMR153W OTU2P38747 307 aaKnown RBP7.82□□□□□ -1.16
NUP53YMR153W AIM18P38884 321 aa7.82□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms