RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C SPO71Q03868 1245 aa3.6□□□□□ -1.83
SHH3YMR118C KRE28Q04431 385 aa3.6□□□□□ -1.83
SHH3YMR118C BCP1Q06338 283 aa3.6□□□□□ -1.83
SHH3YMR118C SUE1Q06524 206 aa3.6□□□□□ -1.83
SHH3YMR118C IRC3Q06683 689 aa3.6□□□□□ -1.83
SHH3YMR118C ADY3Q07732 790 aa3.6□□□□□ -1.83
SHH3YMR118C RIX7Q07844 837 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C NSE1Q07913 336 aa3.6□□□□□ -1.83
SHH3YMR118C YLR053CQ12026 108 aa3.6□□□□□ -1.83
SHH3YMR118C CHS5Q12114 671 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C SGT2Q12118 346 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C MDM20Q12387 796 aaKnown RBP3.6□□□□□ -1.83
SHH3YMR118C RRD2Q12461 358 aa3.6□□□□□ -1.83
SHH3YMR118C RKM4Q12504 494 aa3.6□□□□□ -1.83
SHH3YMR118C FLO11P08640 1367 aa3.6□□□□□ -1.83
SHH3YMR118C SRD1P09007 221 aa3.59□□□□□ -1.83
SHH3YMR118C SUI3P09064 285 aaKnown RBP3.59□□□□□ -1.83
SHH3YMR118C ILS1P09436 1072 aaKnown RBP3.59□□□□□ -1.83
SHH3YMR118C FUS1P11710 512 aa3.59□□□□□ -1.83
SHH3YMR118C DBP5P20449 482 aaKnown RBP3.59□□□□□ -1.83
SHH3YMR118C AEP2P22136 580 aa3.59□□□□□ -1.83
SHH3YMR118C NPP1P25353 742 aa3.59□□□□□ -1.83
SHH3YMR118C DGR2P32330 852 aa3.59□□□□□ -1.83
SHH3YMR118C RPC82P32349 654 aa3.59□□□□□ -1.83
SHH3YMR118C RIB7P33312 244 aa3.59□□□□□ -1.83
SHH3YMR118C BUD2P33314 1104 aa3.59□□□□□ -1.83
SHH3YMR118C SRL3P36167 246 aa3.59□□□□□ -1.83
SHH3YMR118C PCA1P38360 1216 aa3.59□□□□□ -1.83
SHH3YMR118C PMC1P38929 1173 aaPredicted RBP3.59□□□□□ -1.83
SHH3YMR118C FRT2P39734 528 aa3.59□□□□□ -1.83
SHH3YMR118C ASG1P40467 964 aa3.59□□□□□ -1.83
SHH3YMR118C CAB2P40506 365 aa3.59□□□□□ -1.83
SHH3YMR118C NEO1P40527 1151 aa3.59□□□□□ -1.83
SHH3YMR118C STB1P42845 420 aa3.59□□□□□ -1.83
SHH3YMR118C RSM26P47141 266 aa3.59□□□□□ -1.83
SHH3YMR118C SHE4P51534 789 aa3.59□□□□□ -1.83
SHH3YMR118C PAN2P53010 1115 aaPredicted RBP3.59□□□□□ -1.83
SHH3YMR118C YGL108CP53139 140 aa3.59□□□□□ -1.83
SHH3YMR118C UTP22P53254 1237 aaPredicted RBP3.59□□□□□ -1.83
SHH3YMR118C LSC1P53598 329 aaKnown RBP3.59□□□□□ -1.83
SHH3YMR118C BIO4P53630 237 aa3.59□□□□□ -1.83
SHH3YMR118C NOG2P53742 486 aaKnown RBP3.59□□□□□ -1.83
SHH3YMR118C SDH1Q00711 640 aa3.59□□□□□ -1.83
SHH3YMR118C ULP1Q02724 621 aa3.59□□□□□ -1.83
SHH3YMR118C ADI1Q03677 179 aa3.59□□□□□ -1.83
SHH3YMR118C SXM1Q04175 944 aaKnown RBP3.59□□□□□ -1.83
SHH3YMR118C YDR222WQ04925 415 aa3.59□□□□□ -1.83
SHH3YMR118C YSH1Q06224 779 aaPredicted RBP3.59□□□□□ -1.83
SHH3YMR118C SKG3Q06315 1026 aa3.59□□□□□ -1.83
SHH3YMR118C CUR1Q06469 252 aa3.59□□□□□ -1.83
SHH3YMR118C DIA2Q08496 732 aaPredicted RBP3.59□□□□□ -1.83
SHH3YMR118C SNX3Q08826 162 aaKnown RBP3.59□□□□□ -1.83
SHH3YMR118C TRE1Q08919 783 aa3.59□□□□□ -1.83
SHH3YMR118C SPE4Q12455 300 aa3.59□□□□□ -1.83
SHH3YMR118C NOT5Q12514 560 aaPredicted RBP3.59□□□□□ -1.83
SHH3YMR118C RAD10P06838 210 aa3.58□□□□□ -1.84
SHH3YMR118C TUB3P09734 445 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C CAF20P12962 161 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C MSD1P15179 658 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C ERS1P17261 260 aa3.58□□□□□ -1.84
SHH3YMR118C SAM2P19358 384 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C PRP22P24384 1145 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C CLB2P24869 491 aa3.58□□□□□ -1.84
SHH3YMR118C RRT12P25381 491 aa3.58□□□□□ -1.84
SHH3YMR118C ADY2P25613 283 aa3.58□□□□□ -1.84
SHH3YMR118C MCM5P29496 775 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C MET4P32389 672 aa3.58□□□□□ -1.84
SHH3YMR118C RPN2P32565 945 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C YSC83P32792 385 aa3.58□□□□□ -1.84
SHH3YMR118C SLM4P38247 162 aa3.58□□□□□ -1.84
SHH3YMR118C TSC10P38342 320 aa3.58□□□□□ -1.84
SHH3YMR118C DIA4P38705 446 aaPredicted RBP3.58□□□□□ -1.84
SHH3YMR118C SMF2P38778 549 aa3.58□□□□□ -1.84
SHH3YMR118C STL1P39932 569 aa3.58□□□□□ -1.84
SHH3YMR118C RPN3P40016 523 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C ARB1P40024 610 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C MAM33P40513 266 aa3.58□□□□□ -1.84
SHH3YMR118C ULP2P40537 1034 aaPredicted RBP3.58□□□□□ -1.84
SHH3YMR118C AIM21P40563 679 aa3.58□□□□□ -1.84
SHH3YMR118C GSM1P42950 618 aa3.58□□□□□ -1.84
SHH3YMR118C LAM5P43560 674 aa3.58□□□□□ -1.84
SHH3YMR118C RSC8P43609 557 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C SAE2P46946 345 aa3.58□□□□□ -1.84
SHH3YMR118C CTR1P49573 406 aa3.58□□□□□ -1.84
SHH3YMR118C TEL2P53038 688 aa3.58□□□□□ -1.84
SHH3YMR118C NUT1P53114 1132 aa3.58□□□□□ -1.84
SHH3YMR118C MRM2P53123 320 aa3.58□□□□□ -1.84
SHH3YMR118C NMA2P53204 395 aa3.58□□□□□ -1.84
SHH3YMR118C DIP5P53388 608 aa3.58□□□□□ -1.84
SHH3YMR118C DSL1P53847 754 aa3.58□□□□□ -1.84
SHH3YMR118C CNM67P53865 581 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C SQS1P53866 767 aaKnown RBP3.58□□□□□ -1.84
SHH3YMR118C ARK1P53974 638 aa3.58□□□□□ -1.84
SHH3YMR118C ORC4P54791 529 aa3.58□□□□□ -1.84
SHH3YMR118C RPA49Q01080 415 aaPredicted RBP3.58□□□□□ -1.84
SHH3YMR118C PRM6Q04705 352 aa3.58□□□□□ -1.84
SHH3YMR118C IVY1Q04934 453 aa3.58□□□□□ -1.84
SHH3YMR118C GIC2Q06648 383 aa3.58□□□□□ -1.84
SHH3YMR118C NOC3Q07896 663 aaPredicted RBP3.58□□□□□ -1.84
SHH3YMR118C CIR2Q08822 631 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms