RNA–Protein interactions for RNA: YLR383W

SMC6, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC6, Length 3,345 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC6YLR383W GPM3Q12326 303 aa2.53□□□□□ -2
SMC6YLR383W BI3Q9ZZW7 517 aa2.53□□□□□ -2
SMC6YLR383W SES1P07284 462 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W RPL11AP0C0W9 174 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W ASP3-2P0CX77 362 aa2.53□□□□□ -2
SMC6YLR383W ASP3-3P0CX78 362 aa2.53□□□□□ -2
SMC6YLR383W ASP3-4P0CX79 362 aa2.53□□□□□ -2
SMC6YLR383W ASP3-1P0CZ17 362 aa2.53□□□□□ -2
SMC6YLR383W GAL11P19659 1081 aa2.53□□□□□ -2
SMC6YLR383W PIN4P34217 668 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SMC6YLR383W MDJ1P35191 511 aa2.53□□□□□ -2
SMC6YLR383W BLI1P35727 113 aa2.53□□□□□ -2
SMC6YLR383W PET10P36139 283 aa2.53□□□□□ -2
SMC6YLR383W NCL1P38205 684 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W RFS1P38234 210 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W YER130CP39959 443 aa2.53□□□□□ -2
SMC6YLR383W ESL1P40456 1118 aa2.53□□□□□ -2
SMC6YLR383W SET2P46995 733 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W JJJ1P53863 590 aa2.53□□□□□ -2
SMC6YLR383W MUK1Q02866 612 aa2.53□□□□□ -2
SMC6YLR383W NGL3Q03210 505 aa2.53□□□□□ -2
SMC6YLR383W HEH2Q03281 663 aa2.53□□□□□ -2
SMC6YLR383W TY1A-MR1Q04215 440 aa2.53□□□□□ -2
SMC6YLR383W YDR461C-AQ2V2P7 80 aa2.53□□□□□ -2
SMC6YLR383W RPL11BQ3E757 174 aaPredicted RBP2.53□□□□□ -2
SMC6YLR383W STT4P37297 1900 aa2.53□□□□□ -2
SMC6YLR383W CDC9P04819 755 aa2.53□□□□□ -2
SMC6YLR383W MTF1P14908 341 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W ERS1P17261 260 aa2.53□□□□□ -2
SMC6YLR383W CLC1P17891 233 aa2.53□□□□□ -2
SMC6YLR383W NAR1P23503 491 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W PHO84P25297 587 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W TRZ1P36159 838 aaPredicted RBP2.53□□□□□ -2
SMC6YLR383W MRPL10P36520 322 aa2.53□□□□□ -2
SMC6YLR383W ARL1P38116 183 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W ECM2P38241 364 aaKnown RBP2.53□□□□□ -2
SMC6YLR383W MEP1P40260 492 aa2.53□□□□□ -2
SMC6YLR383W YTA6P40328 754 aa2.53□□□□□ -2
SMC6YLR383W PET130P47065 347 aa2.53□□□□□ -2
SMC6YLR383W MET13P53128 600 aa2.53□□□□□ -2
SMC6YLR383W GUP1P53154 560 aa2.53□□□□□ -2
SMC6YLR383W PEX31P53203 462 aa2.53□□□□□ -2
SMC6YLR383W SLD5Q03406 294 aa2.53□□□□□ -2
SMC6YLR383W ADY4Q05955 493 aa2.53□□□□□ -2
SMC6YLR383W RCL1Q08096 367 aaPredicted RBP2.53□□□□□ -2
SMC6YLR383W ATG11Q12527 1178 aa2.53□□□□□ -2
SMC6YLR383W CTF3Q12748 733 aa2.53□□□□□ -2
SMC6YLR383W ECM3Q99252 613 aa2.53□□□□□ -2
SMC6YLR383W CDC12P32468 407 aaKnown RBP2.52□□□□□ -2.01
SMC6YLR383W SPC29P33419 253 aa2.52□□□□□ -2.01
SMC6YLR383W PEX6P33760 1030 aa2.52□□□□□ -2.01
SMC6YLR383W SQT1P35184 431 aa2.52□□□□□ -2.01
SMC6YLR383W YKR051WP36142 418 aa2.52□□□□□ -2.01
SMC6YLR383W BAP2P38084 609 aa2.52□□□□□ -2.01
SMC6YLR383W PSA1P41940 361 aaKnown RBP2.52□□□□□ -2.01
SMC6YLR383W LSC2P53312 427 aa2.52□□□□□ -2.01
SMC6YLR383W SFB2P53953 876 aa2.52□□□□□ -2.01
SMC6YLR383W TIM8P57744 87 aa2.52□□□□□ -2.01
SMC6YLR383W YDR222WQ04925 415 aa2.52□□□□□ -2.01
SMC6YLR383W BSP1Q06604 576 aa2.52□□□□□ -2.01
SMC6YLR383W SIL1Q08199 421 aa2.52□□□□□ -2.01
SMC6YLR383W DAP1Q12091 152 aa2.52□□□□□ -2.01
SMC6YLR383W MSB2P32334 1306 aa2.52□□□□□ -2.01
SMC6YLR383W KAR1P11927 433 aa2.52□□□□□ -2.01
SMC6YLR383W WHI2P12611 486 aa2.52□□□□□ -2.01
SMC6YLR383W SAT4P25333 603 aaKnown RBP2.52□□□□□ -2.01
SMC6YLR383W ARE1P25628 610 aa2.52□□□□□ -2.01
SMC6YLR383W TRK2P28584 889 aa2.52□□□□□ -2.01
SMC6YLR383W MLS1P30952 554 aa2.52□□□□□ -2.01
SMC6YLR383W ABZ1P37254 787 aaPredicted RBP2.52□□□□□ -2.01
SMC6YLR383W NOP4P37838 685 aaKnown RBP2.52□□□□□ -2.01
SMC6YLR383W TCD1P38756 429 aa2.52□□□□□ -2.01
SMC6YLR383W RPH1P39956 796 aa2.52□□□□□ -2.01
SMC6YLR383W SMC3P47037 1230 aa2.52□□□□□ -2.01
SMC6YLR383W YGL039WP53183 348 aaKnown RBP2.52□□□□□ -2.01
SMC6YLR383W MTQ2Q03920 221 aaPredicted RBP2.52□□□□□ -2.01
SMC6YLR383W CRD1Q07560 283 aa2.52□□□□□ -2.01
SMC6YLR383W UTP20P35194 2493 aaKnown RBP2.52□□□□□ -2.01
SMC6YLR383W INH1P01097 85 aa2.52□□□□□ -2.01
SMC6YLR383W HMG2P12684 1045 aa2.52□□□□□ -2.01
SMC6YLR383W PRP2P20095 876 aaPredicted RBP2.52□□□□□ -2.01
SMC6YLR383W PLC1P32383 869 aa2.52□□□□□ -2.01
SMC6YLR383W YKL107WP34251 309 aa2.52□□□□□ -2.01
SMC6YLR383W CSG2P35206 410 aa2.52□□□□□ -2.01
SMC6YLR383W IML2P47031 731 aa2.52□□□□□ -2.01
SMC6YLR383W GCV1P48015 400 aa2.52□□□□□ -2.01
SMC6YLR383W CCM1P48237 864 aaPredicted RBP2.52□□□□□ -2.01
SMC6YLR383W MND1P53102 219 aa2.52□□□□□ -2.01
SMC6YLR383W ECM38Q05902 660 aaPredicted RBP2.52□□□□□ -2.01
SMC6YLR383W GIC2Q06648 383 aa2.52□□□□□ -2.01
SMC6YLR383W YLR413WQ06689 675 aa2.52□□□□□ -2.01
SMC6YLR383W TRE1Q08919 783 aa2.52□□□□□ -2.01
SMC6YLR383W GNT1Q12096 491 aa2.52□□□□□ -2.01
SMC6YLR383W OSH2Q12451 1283 aa2.52□□□□□ -2.01
SMC6YLR383W YDR034W-BQ6Q5X2 51 aa2.52□□□□□ -2.01
SMC6YLR383W ILV1P00927 576 aaKnown RBP2.51□□□□□ -2.01
SMC6YLR383W AI3P03877 415 aa2.51□□□□□ -2.01
SMC6YLR383W IMA3P0CW40 589 aa2.51□□□□□ -2.01
SMC6YLR383W IMA4P0CW41 589 aa2.51□□□□□ -2.01
SMC6YLR383W PGS1P25578 521 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms