RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C YGL140CP53120 1219 aa9.42□□□□□ -0.9
SEC61YLR378C YPR003CP53394 754 aa9.42□□□□□ -0.9
SEC61YLR378C GRX8Q05926 109 aa9.42□□□□□ -0.9
SEC61YLR378C SAM3Q08986 587 aa9.42□□□□□ -0.9
SEC61YLR378C SVS1Q12254 260 aa9.42□□□□□ -0.9
SEC61YLR378C MET16P18408 261 aaPredicted RBP9.41□□□□□ -0.9
SEC61YLR378C CLB1P24868 471 aa9.41□□□□□ -0.9
SEC61YLR378C PGS1P25578 521 aa9.41□□□□□ -0.9
SEC61YLR378C ADY2P25613 283 aa9.41□□□□□ -0.9
SEC61YLR378C RAD27P26793 382 aa9.41□□□□□ -0.9
SEC61YLR378C PTC3P34221 468 aaKnown RBP9.41□□□□□ -0.9
SEC61YLR378C GCS1P35197 352 aa9.41□□□□□ -0.9
SEC61YLR378C SET3P36124 751 aa9.41□□□□□ -0.9
SEC61YLR378C YBP1P38315 674 aa9.41□□□□□ -0.9
SEC61YLR378C YEL028WP39989 153 aa9.41□□□□□ -0.9
SEC61YLR378C TAH11P47112 604 aa9.41□□□□□ -0.9
SEC61YLR378C BFA1P47113 574 aa9.41□□□□□ -0.9
SEC61YLR378C ECM22Q05958 814 aaPredicted RBP9.41□□□□□ -0.9
SEC61YLR378C CBC2Q08920 208 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
SEC61YLR378C MNL2Q12205 849 aa9.41□□□□□ -0.9
SEC61YLR378C HIS1P00498 297 aaKnown RBP9.4□□□□□ -0.9
SEC61YLR378C CDC20P26309 610 aa9.4□□□□□ -0.9
SEC61YLR378C PEP7P32609 515 aa9.4□□□□□ -0.9
SEC61YLR378C CDC27P38042 758 aa9.4□□□□□ -0.9
SEC61YLR378C RFS1P38234 210 aaKnown RBP9.4□□□□□ -0.9
SEC61YLR378C RIM4P38741 713 aa9.4□□□□□ -0.9
SEC61YLR378C RSC8P43609 557 aaKnown RBP9.4□□□□□ -0.9
SEC61YLR378C GCN5Q03330 439 aa9.4□□□□□ -0.9
SEC61YLR378C PRC1P00729 532 aa9.39□□□□□ -0.91
SEC61YLR378C ERR1P0CX10 437 aa9.39□□□□□ -0.91
SEC61YLR378C ERR2P0CX11 437 aa9.39□□□□□ -0.91
SEC61YLR378C GPA2P10823 449 aa9.39□□□□□ -0.91
SEC61YLR378C HSP60P19882 572 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C URA10P30402 227 aa9.39□□□□□ -0.91
SEC61YLR378C ETR1P38071 380 aa9.39□□□□□ -0.91
SEC61YLR378C SIF2P38262 535 aa9.39□□□□□ -0.91
SEC61YLR378C YBR225WP38321 900 aa9.39□□□□□ -0.91
SEC61YLR378C PPE1P38796 400 aa9.39□□□□□ -0.91
SEC61YLR378C YAT2P40017 923 aa9.39□□□□□ -0.91
SEC61YLR378C ERR3P42222 437 aa9.39□□□□□ -0.91
SEC61YLR378C EMW1P42842 904 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C CNN1P43618 361 aa9.39□□□□□ -0.91
SEC61YLR378C RTT101P47050 842 aa9.39□□□□□ -0.91
SEC61YLR378C MCM6P53091 1017 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C LSC1P53598 329 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C SLU7Q02775 382 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C YML119WQ03208 357 aa9.39□□□□□ -0.91
SEC61YLR378C ARA2Q04212 335 aa9.39□□□□□ -0.91
SEC61YLR378C YET3Q07451 203 aa9.39□□□□□ -0.91
SEC61YLR378C CUE5Q08412 411 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C SSC1P0CS90 654 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C TSR4P25040 408 aa9.39□□□□□ -0.91
SEC61YLR378C PAT1P25644 796 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C DAL1P32375 460 aa9.39□□□□□ -0.91
SEC61YLR378C FUI1P38196 639 aa9.39□□□□□ -0.91
SEC61YLR378C EDC3P39998 551 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C RPS10BP46784 105 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C MRX6P48564 524 aa9.39□□□□□ -0.91
SEC61YLR378C RLI1Q03195 608 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C ENT5Q03769 411 aaKnown RBP9.39□□□□□ -0.91
SEC61YLR378C RPS10AQ08745 105 aaPredicted RBP9.39□□□□□ -0.91
SEC61YLR378C TEF1P02994 458 aaKnown RBP9.38□□□□□ -0.91
SEC61YLR378C AMS1P22855 1083 aa9.38□□□□□ -0.91
SEC61YLR378C NDI1P32340 513 aa9.38□□□□□ -0.91
SEC61YLR378C HEM12P32347 362 aaPredicted RBP9.38□□□□□ -0.91
SEC61YLR378C UTR2P32623 467 aa9.38□□□□□ -0.91
SEC61YLR378C LIN1P38852 340 aaPredicted RBP9.38□□□□□ -0.91
SEC61YLR378C ATM1P40416 690 aa9.38□□□□□ -0.91
SEC61YLR378C MAF1P41910 395 aa9.38□□□□□ -0.91
SEC61YLR378C TDA10P42938 290 aa9.38□□□□□ -0.91
SEC61YLR378C ROK1P45818 564 aaPredicted RBP9.38□□□□□ -0.91
SEC61YLR378C LIA1P47120 325 aaKnown RBP9.38□□□□□ -0.91
SEC61YLR378C MET13P53128 600 aa9.38□□□□□ -0.91
SEC61YLR378C YNL144CP53907 740 aa9.38□□□□□ -0.91
SEC61YLR378C PNG1Q02890 363 aa9.38□□□□□ -0.91
SEC61YLR378C UBR2Q07963 1872 aa9.38□□□□□ -0.91
SEC61YLR378C YLR422WQ06409 1932 aa9.37□□□□□ -0.91
SEC61YLR378C GID7P25569 745 aa9.37□□□□□ -0.91
SEC61YLR378C AIM26P32858 118 aa9.37□□□□□ -0.91
SEC61YLR378C MRS6P32864 603 aaKnown RBP9.37□□□□□ -0.91
SEC61YLR378C YKR051WP36142 418 aa9.37□□□□□ -0.91
SEC61YLR378C YSW1P38280 609 aa9.37□□□□□ -0.91
SEC61YLR378C MSC7P38694 644 aa9.37□□□□□ -0.91
SEC61YLR378C BTT1P40314 149 aaPredicted RBP9.37□□□□□ -0.91
SEC61YLR378C DPH1P40487 425 aaKnown RBP9.37□□□□□ -0.91
SEC61YLR378C SLT2Q00772 484 aa9.37□□□□□ -0.91
SEC61YLR378C HEH2Q03281 663 aa9.37□□□□□ -0.91
SEC61YLR378C HER2Q03557 464 aa9.37□□□□□ -0.91
SEC61YLR378C YMR160WQ03823 816 aa9.37□□□□□ -0.91
SEC61YLR378C INP2Q03824 705 aa9.37□□□□□ -0.91
SEC61YLR378C EMI2Q04409 500 aaKnown RBP9.37□□□□□ -0.91
SEC61YLR378C ARP9Q05123 467 aa9.37□□□□□ -0.91
SEC61YLR378C TDA5Q06417 326 aaKnown RBP9.37□□□□□ -0.91
SEC61YLR378C YLR053CQ12026 108 aa9.37□□□□□ -0.91
SEC61YLR378C PUF2Q12221 1075 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
SEC61YLR378C YCL068CP25593 260 aa9.36□□□□□ -0.91
SEC61YLR378C PMI40P29952 429 aaKnown RBP9.36□□□□□ -0.91
SEC61YLR378C SEC6P32844 805 aa9.36□□□□□ -0.91
SEC61YLR378C ECM13P38195 257 aa9.36□□□□□ -0.91
SEC61YLR378C URA8P38627 578 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms