RNA–Protein interactions for RNA: YLR254C

NDL1, Transcript of Homolog of nuclear distribution factor NudE, yeast

Gene NDL1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDL1	YLR254C	SSB1	P11484	613 aa	Known RBP	4.3	□□□□□ -1.72
NDL1	YLR254C	KAR1	P11927	433 aa		4.3	□□□□□ -1.72
NDL1	YLR254C	HOP1	P20050	605 aa		4.3	□□□□□ -1.72
NDL1	YLR254C	LOT5	P34234	306 aa		4.3	□□□□□ -1.72
NDL1	YLR254C	RMA1	P36001	430 aa	Known RBP	4.3	□□□□□ -1.72
NDL1	YLR254C	EMP65	P40085	556 aa		4.3	□□□□□ -1.72
NDL1	YLR254C	SSB2	P40150	613 aa	Known RBP	4.3	□□□□□ -1.72
NDL1	YLR254C	PEF1	P53238	335 aa		4.3	□□□□□ -1.72
NDL1	YLR254C	MTD1	Q02046	320 aa	Known RBP	4.3	□□□□□ -1.72
NDL1	YLR254C	GFD1	Q04839	188 aa	Known RBP	4.3	□□□□□ -1.72
NDL1	YLR254C	CWC2	Q12046	339 aa	Predicted RBP	4.3	□□□□□ -1.72
NDL1	YLR254C	VPS5	Q92331	675 aa		4.3	□□□□□ -1.72
NDL1	YLR254C	MRC1	P25588	1096 aa		4.29	□□□□□ -1.72
NDL1	YLR254C	CAP1	P28495	268 aa	Known RBP	4.29	□□□□□ -1.72
NDL1	YLR254C	HEM12	P32347	362 aa	Predicted RBP	4.29	□□□□□ -1.72
NDL1	YLR254C	LRO1	P40345	661 aa		4.29	□□□□□ -1.72
NDL1	YLR254C	PEX14	P53112	341 aa		4.29	□□□□□ -1.72
NDL1	YLR254C	RPS15	Q01855	142 aa	Known RBP	4.29	□□□□□ -1.72
NDL1	YLR254C	ECM38	Q05902	660 aa	Predicted RBP	4.29	□□□□□ -1.72
NDL1	YLR254C	ARR3	Q06598	404 aa		4.29	□□□□□ -1.72
NDL1	YLR254C	BSP1	Q06604	576 aa		4.29	□□□□□ -1.72
NDL1	YLR254C	PEX15	Q08215	383 aa		4.29	□□□□□ -1.72
NDL1	YLR254C	HER1	Q12276	1246 aa		4.29	□□□□□ -1.72
NDL1	YLR254C	YPR089W	O13585	888 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	YMR085W	P0CF18	432 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	RNR3	P21672	869 aa	Known RBP	4.28	□□□□□ -1.72
NDL1	YLR254C	TFC4	P33339	1025 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	GCS1	P35197	352 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	ENP1	P38333	483 aa	Known RBP	4.28	□□□□□ -1.72
NDL1	YLR254C	YJL193W	P39542	402 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	EAF5	P39995	279 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	MDR1	P53258	950 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	HOL1	P53389	586 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
NDL1	YLR254C	ENT2	Q05785	613 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	YOR378W	Q08902	515 aa		4.28	□□□□□ -1.72
NDL1	YLR254C	RDL1	Q12305	139 aa	Known RBP	4.28	□□□□□ -1.72
NDL1	YLR254C	SEC12	P11655	471 aa		4.27	□□□□□ -1.73
NDL1	YLR254C	VPS33	P20795	691 aa		4.27	□□□□□ -1.73
NDL1	YLR254C	CWH43	P25618	953 aa		4.27	□□□□□ -1.73
NDL1	YLR254C	PLC1	P32383	869 aa		4.27	□□□□□ -1.73
NDL1	YLR254C	MNT2	P53059	558 aa		4.27	□□□□□ -1.73
NDL1	YLR254C	FOL1	P53848	824 aa		4.27	□□□□□ -1.73
NDL1	YLR254C	PHM6	Q05637	104 aa		4.27	□□□□□ -1.73
NDL1	YLR254C	YLR111W	Q12528	110 aa		4.27	□□□□□ -1.73
NDL1	YLR254C	GSY2	P27472	705 aa		4.26	□□□□□ -1.73
NDL1	YLR254C	CCL1	P37366	393 aa		4.26	□□□□□ -1.73
NDL1	YLR254C	STL1	P39932	569 aa		4.26	□□□□□ -1.73
NDL1	YLR254C	SAP4	P53036	818 aa		4.26	□□□□□ -1.73
NDL1	YLR254C	WAR1	Q03631	944 aa		4.26	□□□□□ -1.73
NDL1	YLR254C	PCK1	P10963	549 aa		4.25	□□□□□ -1.73
NDL1	YLR254C	MAF1	P41910	395 aa		4.25	□□□□□ -1.73
NDL1	YLR254C	USA1	Q03714	838 aa		4.25	□□□□□ -1.73
NDL1	YLR254C	TPO3	Q06451	622 aa		4.25	□□□□□ -1.73
NDL1	YLR254C	SLX4	Q12098	748 aa		4.25	□□□□□ -1.73
NDL1	YLR254C	DSS4	P32601	143 aa		4.24	□□□□□ -1.73
NDL1	YLR254C	CCT4	P39078	528 aa	Known RBP	4.24	□□□□□ -1.73
NDL1	YLR254C	NUP53	Q03790	475 aa		4.24	□□□□□ -1.73
NDL1	YLR254C	PSF3	Q12146	194 aa		4.24	□□□□□ -1.73
NDL1	YLR254C	HOS1	Q12214	470 aa		4.24	□□□□□ -1.73
NDL1	YLR254C	ARG1	P22768	420 aa		4.23	□□□□□ -1.73
NDL1	YLR254C	MGM1	P32266	881 aa		4.23	□□□□□ -1.73
NDL1	YLR254C	YPT10	P38146	199 aa		4.23	□□□□□ -1.73
NDL1	YLR254C	SSP120	P39931	234 aa	Known RBP	4.23	□□□□□ -1.73
NDL1	YLR254C	YIL024C	P40543	189 aa		4.23	□□□□□ -1.73
NDL1	YLR254C	YPL071C	Q02864	156 aa		4.23	□□□□□ -1.73
NDL1	YLR254C	RTK1	Q12100	620 aa	Predicted RBP	4.23	□□□□□ -1.73
NDL1	YLR254C	URA3	P03962	267 aa		4.22	□□□□□ -1.73
NDL1	YLR254C	BET2	P20133	325 aa		4.22	□□□□□ -1.73
NDL1	YLR254C	PET309	P32522	965 aa	Predicted RBP	4.22	□□□□□ -1.73
NDL1	YLR254C	YIL092W	P40497	633 aa		4.22	□□□□□ -1.73
NDL1	YLR254C	MAD2	P40958	196 aa		4.22	□□□□□ -1.73
NDL1	YLR254C	SAE2	P46946	345 aa		4.22	□□□□□ -1.73
NDL1	YLR254C	YNR071C	P53757	342 aa		4.22	□□□□□ -1.73
NDL1	YLR254C	IOC4	Q04213	475 aa		4.22	□□□□□ -1.73
NDL1	YLR254C	MRPL1	Q04599	285 aa		4.22	□□□□□ -1.73
NDL1	YLR254C	PHO3	P24031	467 aa		4.21	□□□□□ -1.74
NDL1	YLR254C	FLO5	P38894	1075 aa		4.21	□□□□□ -1.74
NDL1	YLR254C	YMR124W	P39523	943 aa	Known RBP	4.21	□□□□□ -1.74
NDL1	YLR254C	TDA10	P42938	290 aa		4.21	□□□□□ -1.74
NDL1	YLR254C	DIN7	Q12086	430 aa		4.21	□□□□□ -1.74
NDL1	YLR254C	BI2	P03873	423 aa		4.2	□□□□□ -1.74
NDL1	YLR254C	AAC1	P04710	309 aa		4.2	□□□□□ -1.74
NDL1	YLR254C	SPN1	Q06505	410 aa	Predicted RBP	4.2	□□□□□ -1.74
NDL1	YLR254C	NOP1	P15646	327 aa	Known RBP	4.19	□□□□□ -1.74
NDL1	YLR254C	STB5	P38699	743 aa		4.19	□□□□□ -1.74
NDL1	YLR254C	SAW1	P39735	261 aa		4.19	□□□□□ -1.74
NDL1	YLR254C	GSM1	P42950	618 aa		4.19	□□□□□ -1.74
NDL1	YLR254C	IRC7	P43623	340 aa		4.19	□□□□□ -1.74
NDL1	YLR254C	CNM67	P53865	581 aa	Known RBP	4.19	□□□□□ -1.74
NDL1	YLR254C	SNA4	Q07549	140 aa		4.19	□□□□□ -1.74
NDL1	YLR254C	BUD7	Q08754	746 aa		4.19	□□□□□ -1.74
NDL1	YLR254C	PCL8	Q08966	492 aa		4.19	□□□□□ -1.74
NDL1	YLR254C	NUR1	Q12066	484 aa		4.19	□□□□□ -1.74
NDL1	YLR254C	DBP10	Q12389	995 aa	Known RBP	4.19	□□□□□ -1.74
NDL1	YLR254C	YER190C-B	P0CX94	160 aa		4.18	□□□□□ -1.74
NDL1	YLR254C	YEL077W-A	P0CX95	160 aa		4.18	□□□□□ -1.74
NDL1	YLR254C	YGR296C-B	P0CX96	160 aa		4.18	□□□□□ -1.74
NDL1	YLR254C	YPL283W-B	P0CX97	160 aa		4.18	□□□□□ -1.74
NDL1	YLR254C	YPR204C-A	P0CX98	160 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms