RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W ISF1P32488 338 aa10.3□□□□□ -0.76
SHH4YLR164W SFB3P38810 929 aa10.3□□□□□ -0.76
SHH4YLR164W CKB2P38930 258 aa10.3□□□□□ -0.76
SHH4YLR164W MMF1P40185 145 aaKnown RBP10.3□□□□□ -0.76
SHH4YLR164W URB2P47108 1174 aa10.3□□□□□ -0.76
SHH4YLR164W YJR079WP47126 109 aa10.3□□□□□ -0.76
SHH4YLR164W CPR6P53691 371 aaKnown RBP10.3□□□□□ -0.76
SHH4YLR164W FRA1Q07825 749 aa10.3□□□□□ -0.76
SHH4YLR164W TEF1P02994 458 aaKnown RBP10.29□□□□□ -0.76
SHH4YLR164W TSR4P25040 408 aa10.29□□□□□ -0.76
SHH4YLR164W ECM13P38195 257 aa10.29□□□□□ -0.76
SHH4YLR164W MSR1P38714 643 aa10.29□□□□□ -0.76
SHH4YLR164W OTU2P38747 307 aaKnown RBP10.29□□□□□ -0.76
SHH4YLR164W YEL028WP39989 153 aa10.29□□□□□ -0.76
SHH4YLR164W SCC4P40090 624 aa10.29□□□□□ -0.76
SHH4YLR164W RPS10BP46784 105 aaKnown RBP10.29□□□□□ -0.76
SHH4YLR164W RPN4Q03465 531 aa10.29□□□□□ -0.76
SHH4YLR164W ARP9Q05123 467 aa10.29□□□□□ -0.76
SHH4YLR164W RPS10AQ08745 105 aaPredicted RBP10.29□□□□□ -0.76
SHH4YLR164W HAA1Q12753 694 aaKnown RBP10.29□□□□□ -0.76
SHH4YLR164W EFG1Q3E705 233 aaKnown RBP10.29□□□□□ -0.76
SHH4YLR164W ENO2P00925 437 aaKnown RBP10.28□□□□□ -0.76
SHH4YLR164W IMA3P0CW40 589 aa10.28□□□□□ -0.76
SHH4YLR164W IMA4P0CW41 589 aa10.28□□□□□ -0.76
SHH4YLR164W SAF1P38352 637 aa10.28□□□□□ -0.76
SHH4YLR164W CIN4P39110 191 aa10.28□□□□□ -0.76
SHH4YLR164W NUP60P39705 539 aa10.28□□□□□ -0.76
SHH4YLR164W YAT2P40017 923 aa10.28□□□□□ -0.76
SHH4YLR164W MND2P40577 368 aa10.28□□□□□ -0.76
SHH4YLR164W EMW1P42842 904 aaKnown RBP10.28□□□□□ -0.76
SHH4YLR164W YFL012WP43580 148 aa10.28□□□□□ -0.76
SHH4YLR164W COQ6P53318 479 aa10.28□□□□□ -0.76
SHH4YLR164W GND2P53319 492 aa10.28□□□□□ -0.76
SHH4YLR164W COG6P53959 839 aa10.28□□□□□ -0.76
SHH4YLR164W YMR027WQ04371 470 aa10.28□□□□□ -0.76
SHH4YLR164W IMA2Q08295 589 aa10.28□□□□□ -0.76
SHH4YLR164W SEY1Q99287 776 aa10.28□□□□□ -0.76
SHH4YLR164W HIS1P00498 297 aaKnown RBP10.27□□□□□ -0.77
SHH4YLR164W GID7P25569 745 aa10.27□□□□□ -0.77
SHH4YLR164W PMI40P29952 429 aaKnown RBP10.27□□□□□ -0.77
SHH4YLR164W MET22P32179 357 aa10.27□□□□□ -0.77
SHH4YLR164W YME1P32795 747 aa10.27□□□□□ -0.77
SHH4YLR164W RAD5P32849 1169 aaPredicted RBP10.27□□□□□ -0.77
SHH4YLR164W MNN11P46985 422 aaKnown RBP10.27□□□□□ -0.77
SHH4YLR164W ZIP2P53061 704 aa10.27□□□□□ -0.77
SHH4YLR164W YPR003CP53394 754 aa10.27□□□□□ -0.77
SHH4YLR164W VPS9P54787 451 aa10.27□□□□□ -0.77
SHH4YLR164W EAR1Q03212 550 aa10.27□□□□□ -0.77
SHH4YLR164W UTP13Q05946 817 aaKnown RBP10.27□□□□□ -0.77
SHH4YLR164W SWC7Q06707 132 aa10.27□□□□□ -0.77
SHH4YLR164W NRT1Q08485 598 aa10.27□□□□□ -0.77
SHH4YLR164W SVS1Q12254 260 aa10.27□□□□□ -0.77
SHH4YLR164W QCR6P00127 147 aa10.26□□□□□ -0.77
SHH4YLR164W PPH22P23595 377 aa10.26□□□□□ -0.77
SHH4YLR164W URA7P28274 579 aaKnown RBP10.26□□□□□ -0.77
SHH4YLR164W BTT1P40314 149 aaPredicted RBP10.26□□□□□ -0.77
SHH4YLR164W SAE2P46946 345 aa10.26□□□□□ -0.77
SHH4YLR164W RTT101P47050 842 aa10.26□□□□□ -0.77
SHH4YLR164W TEP1P53916 434 aa10.26□□□□□ -0.77
SHH4YLR164W SHR3Q02774 210 aa10.26□□□□□ -0.77
SHH4YLR164W INP2Q03824 705 aa10.26□□□□□ -0.77
SHH4YLR164W PIG1Q06216 648 aa10.26□□□□□ -0.77
SHH4YLR164W OCA6Q12454 224 aa10.26□□□□□ -0.77
SHH4YLR164W COX5AP00424 153 aa10.25□□□□□ -0.77
SHH4YLR164W ILV2P07342 687 aaKnown RBP10.25□□□□□ -0.77
SHH4YLR164W ERR1P0CX10 437 aa10.25□□□□□ -0.77
SHH4YLR164W ERR2P0CX11 437 aa10.25□□□□□ -0.77
SHH4YLR164W ILV6P25605 309 aaKnown RBP10.25□□□□□ -0.77
SHH4YLR164W MSH1P25846 959 aa10.25□□□□□ -0.77
SHH4YLR164W OAF3P36023 863 aa10.25□□□□□ -0.77
SHH4YLR164W RPC37P36121 282 aa10.25□□□□□ -0.77
SHH4YLR164W ERR3P42222 437 aa10.25□□□□□ -0.77
SHH4YLR164W TCB2P48231 1178 aa10.25□□□□□ -0.77
SHH4YLR164W TRF5P48561 642 aaKnown RBP10.25□□□□□ -0.77
SHH4YLR164W TAN1P53072 289 aaPredicted RBP10.25□□□□□ -0.77
SHH4YLR164W ECM38Q05902 660 aaPredicted RBP10.25□□□□□ -0.77
SHH4YLR164W ADE13Q05911 482 aaKnown RBP10.25□□□□□ -0.77
SHH4YLR164W YEL077CQ3E7X8 1277 aa10.25□□□□□ -0.77
SHH4YLR164W PEX34P25584 144 aa10.24□□□□□ -0.77
SHH4YLR164W SMF2P38778 549 aa10.24□□□□□ -0.77
SHH4YLR164W UFE1P41834 346 aa10.24□□□□□ -0.77
SHH4YLR164W TFG1P41895 735 aaPredicted RBP10.24□□□□□ -0.77
SHH4YLR164W BFA1P47113 574 aa10.24□□□□□ -0.77
SHH4YLR164W ASN2P49090 572 aaKnown RBP10.24□□□□□ -0.77
SHH4YLR164W TIM13P53299 105 aa10.24□□□□□ -0.77
SHH4YLR164W SLU7Q02775 382 aaKnown RBP10.24□□□□□ -0.77
SHH4YLR164W YDL073WQ07454 984 aa10.24□□□□□ -0.77
SHH4YLR164W SLD7Q08457 257 aa10.24□□□□□ -0.77
SHH4YLR164W SPE3Q12074 293 aaKnown RBP10.24□□□□□ -0.77
SHH4YLR164W AFI1Q99222 893 aa10.24□□□□□ -0.77
SHH4YLR164W APE1P14904 514 aa10.23□□□□□ -0.77
SHH4YLR164W MTF1P14908 341 aaKnown RBP10.23□□□□□ -0.77
SHH4YLR164W KAR4P25583 335 aa10.23□□□□□ -0.77
SHH4YLR164W SEC6P32844 805 aa10.23□□□□□ -0.77
SHH4YLR164W KES1P35844 434 aaKnown RBP10.23□□□□□ -0.77
SHH4YLR164W KAP104P38217 918 aaKnown RBP10.23□□□□□ -0.77
SHH4YLR164W PEX28P38848 579 aa10.23□□□□□ -0.77
SHH4YLR164W YIL161WP40449 235 aaKnown RBP10.23□□□□□ -0.77
SHH4YLR164W IML2P47031 731 aa10.23□□□□□ -0.77
SHH4YLR164W PSP1P50896 841 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms