RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	AIM18	P38884	321 aa		10.53	□□□□□ -0.72
SHB17	YKR043C	FLC2	P39719	783 aa		10.53	□□□□□ -0.72
SHB17	YKR043C	SAW1	P39735	261 aa		10.53	□□□□□ -0.72
SHB17	YKR043C	EXO1	P39875	702 aa		10.53	□□□□□ -0.72
SHB17	YKR043C	MNN11	P46985	422 aa	Known RBP	10.53	□□□□□ -0.72
SHB17	YKR043C	NMA2	P53204	395 aa		10.53	□□□□□ -0.72
SHB17	YKR043C	INP2	Q03824	705 aa		10.53	□□□□□ -0.72
SHB17	YKR043C	SML1	Q04964	104 aa		10.53	□□□□□ -0.72
SHB17	YKR043C	SLY1	P22213	666 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	HCM1	P25364	564 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	BIT2	P38346	545 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	SAK1	P38990	1142 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	END3	P39013	349 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	YEL028W	P39989	153 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	FAA4	P47912	694 aa	Known RBP	10.52	□□□□□ -0.73
SHB17	YKR043C	RFX1	P48743	811 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	YML6	P51998	286 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	YSH1	Q06224	779 aa	Predicted RBP	10.52	□□□□□ -0.73
SHB17	YKR043C	YDR018C	Q12185	396 aa		10.52	□□□□□ -0.73
SHB17	YKR043C	EFG1	Q3E705	233 aa	Known RBP	10.52	□□□□□ -0.73
SHB17	YKR043C	MIS1	P09440	975 aa	Known RBP	10.51	□□□□□ -0.73
SHB17	YKR043C	SPT23	P35210	1082 aa		10.51	□□□□□ -0.73
SHB17	YKR043C	RPS10B	P46784	105 aa	Known RBP	10.51	□□□□□ -0.73
SHB17	YKR043C	YJL132W	P47014	750 aa		10.51	□□□□□ -0.73
SHB17	YKR043C	ALY2	P47029	1046 aa		10.51	□□□□□ -0.73
SHB17	YKR043C	TCB2	P48231	1178 aa		10.51	□□□□□ -0.73
SHB17	YKR043C	FLC3	P53121	802 aa		10.51	□□□□□ -0.73
SHB17	YKR043C	VPS9	P54787	451 aa		10.51	□□□□□ -0.73
SHB17	YKR043C	DOS2	P54858	310 aa		10.51	□□□□□ -0.73
SHB17	YKR043C	POB3	Q04636	552 aa	Known RBP	10.51	□□□□□ -0.73
SHB17	YKR043C	PEX15	Q08215	383 aa		10.51	□□□□□ -0.73
SHB17	YKR043C	RPS10A	Q08745	105 aa	Predicted RBP	10.51	□□□□□ -0.73
SHB17	YKR043C	PAP1	P29468	568 aa	Known RBP	10.5	□□□□□ -0.73
SHB17	YKR043C	MRPL40	P36534	297 aa		10.5	□□□□□ -0.73
SHB17	YKR043C	CRP1	P38845	465 aa	Known RBP	10.5	□□□□□ -0.73
SHB17	YKR043C	STL1	P39932	569 aa		10.5	□□□□□ -0.73
SHB17	YKR043C	OSW5	P40219	148 aa		10.5	□□□□□ -0.73
SHB17	YKR043C	MKT1	P40850	830 aa	Known RBP	10.5	□□□□□ -0.73
SHB17	YKR043C	PYK2	P52489	506 aa	Known RBP	10.5	□□□□□ -0.73
SHB17	YKR043C	YGR127W	P53275	312 aa		10.5	□□□□□ -0.73
SHB17	YKR043C	CWC22	P53333	577 aa	Known RBP	10.5	□□□□□ -0.73
SHB17	YKR043C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	10.5	□□□□□ -0.73	not detected
SHB17	YKR043C	YNR063W	P53749	607 aa		10.5	□□□□□ -0.73
SHB17	YKR043C	MCM16	Q12262	181 aa		10.5	□□□□□ -0.73
SHB17	YKR043C	AFI1	Q99222	893 aa		10.5	□□□□□ -0.73
SHB17	YKR043C	ENO1	P00924	437 aa	Known RBP	10.49	□□□□□ -0.73
SHB17	YKR043C	MSF1	P08425	469 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	HOM2	P13663	365 aa	Known RBP	10.49	□□□□□ -0.73
SHB17	YKR043C	KAR9	P32526	644 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	STE13	P33894	931 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	SRP68	P38687	599 aa	Known RBP	10.49	□□□□□ -0.73
SHB17	YKR043C	FMO1	P38866	432 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	SMF1	P38925	575 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	ATM1	P40416	690 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	MVP1	P40959	511 aa	Known RBP	10.49	□□□□□ -0.73
SHB17	YKR043C	AMA1	P50082	593 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	RIM8	P53179	542 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	RSB1	Q08417	382 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	CLP1	Q08685	445 aa	Predicted RBP	10.49	□□□□□ -0.73
SHB17	YKR043C	SEY1	Q99287	776 aa		10.49	□□□□□ -0.73
SHB17	YKR043C	DAL81	P21657	970 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	MSH2	P25847	964 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	ADD66	P36040	267 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	APM3	P38153	483 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	OTU2	P38747	307 aa	Known RBP	10.48	□□□□□ -0.73
SHB17	YKR043C	RRN7	P40992	514 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	DLD2	P46681	530 aa	Known RBP	10.48	□□□□□ -0.73
SHB17	YKR043C	RPC17	P47076	161 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	ASN2	P49090	572 aa	Known RBP	10.48	□□□□□ -0.73
SHB17	YKR043C	TDA9	Q04545	1251 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	SWC7	Q06707	132 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	10.48	□□□□□ -0.73	not detected
SHB17	YKR043C	AIM41	Q12032	185 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	FAP7	Q12055	197 aa	Predicted RBP	10.48	□□□□□ -0.73
SHB17	YKR043C	YLR046C	Q12253	270 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	ZRT2	Q12436	422 aa		10.48	□□□□□ -0.73
SHB17	YKR043C	PYC1	P11154	1178 aa	Known RBP	10.47	□□□□□ -0.73
SHB17	YKR043C	GEX1	P25596	615 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	GEX2	P36173	615 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	MMS21	P38632	267 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	DIA4	P38705	446 aa	Predicted RBP	10.47	□□□□□ -0.73
SHB17	YKR043C	PPE1	P38796	400 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	YMR134W	P40207	237 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	NDC80	P40460	691 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	TRF5	P48561	642 aa	Known RBP	10.47	□□□□□ -0.73
SHB17	YKR043C	CWC24	P53769	259 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	MTG1	Q03151	367 aa	Predicted RBP	10.47	□□□□□ -0.73
SHB17	YKR043C	YMR187C	Q03236	431 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	YLL056C	Q12177	298 aa		10.47	□□□□□ -0.73
SHB17	YKR043C	YJU3	P28321	313 aa		10.46	□□□□□ -0.73
SHB17	YKR043C	RAD5	P32849	1169 aa	Predicted RBP	10.46	□□□□□ -0.73
SHB17	YKR043C	MND2	P40577	368 aa		10.46	□□□□□ -0.73
SHB17	YKR043C	AIM23	P47015	356 aa		10.46	□□□□□ -0.73
SHB17	YKR043C	HLJ1	P48353	224 aa		10.46	□□□□□ -0.73
SHB17	YKR043C	NMA111	P53920	997 aa		10.46	□□□□□ -0.73
SHB17	YKR043C	NIS1	P53939	407 aa		10.46	□□□□□ -0.73
SHB17	YKR043C	PIR1	Q03178	341 aa		10.46	□□□□□ -0.73
SHB17	YKR043C	ECI1	Q05871	280 aa		10.46	□□□□□ -0.73
SHB17	YKR043C	LCB5	Q06147	687 aa	Known RBP	10.46	□□□□□ -0.73
SHB17	YKR043C	PER33	Q12144	273 aa		10.46	□□□□□ -0.73

Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms