RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W SEC12P11655 471 aa3.53□□□□□ -1.84
VPS51YKR020W COX11P19516 300 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W RNR3P21672 869 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W CAP1P28495 268 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W GRX4P32642 244 aa3.53□□□□□ -1.84
VPS51YKR020W RMA1P36001 430 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W YJL193WP39542 402 aa3.53□□□□□ -1.84
VPS51YKR020W NIT2P47016 307 aa3.53□□□□□ -1.84
VPS51YKR020W PIP2P52960 996 aa3.53□□□□□ -1.84
VPS51YKR020W RPS15Q01855 142 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W ECM38Q05902 660 aaPredicted RBP3.53□□□□□ -1.84
VPS51YKR020W CWC2Q12046 339 aaPredicted RBP3.53□□□□□ -1.84
VPS51YKR020W TGS1Q12052 315 aa3.53□□□□□ -1.84
VPS51YKR020W RPL7BQ12213 244 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W TMA17Q12513 150 aa3.53□□□□□ -1.84
VPS51YKR020W DNF1P32660 1571 aa3.53□□□□□ -1.84
VPS51YKR020W TY1B-JR2P47100 1755 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W TY1B-ER2Q03619 1755 aa3.53□□□□□ -1.84
VPS51YKR020W TY1B-MR1Q04214 1755 aa3.53□□□□□ -1.84
VPS51YKR020W TY1B-MR2Q04670 1755 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W TY1B-LR1Q12088 1755 aaKnown RBP3.53□□□□□ -1.84
VPS51YKR020W TY1B-NL1Q12112 1755 aa3.53□□□□□ -1.84
VPS51YKR020W TY1B-GR1Q12141 1755 aa3.53□□□□□ -1.84
VPS51YKR020W TY1B-BLQ12490 1755 aa3.53□□□□□ -1.84
VPS51YKR020W MMS22Q06164 1454 aa3.53□□□□□ -1.84
VPS51YKR020W PGK1P00560 416 aaKnown RBP3.52□□□□□ -1.85
VPS51YKR020W LEU2P04173 364 aaPredicted RBP3.52□□□□□ -1.85
VPS51YKR020W KAR1P11927 433 aa3.52□□□□□ -1.85
VPS51YKR020W PMA2P19657 947 aa3.52□□□□□ -1.85
VPS51YKR020W VPS33P20795 691 aa3.52□□□□□ -1.85
VPS51YKR020W PEF1P53238 335 aa3.52□□□□□ -1.85
VPS51YKR020W YNL018CP53976 612 aa3.52□□□□□ -1.85
VPS51YKR020W ORM2Q06144 216 aa3.52□□□□□ -1.85
VPS51YKR020W ARR3Q06598 404 aa3.52□□□□□ -1.85
VPS51YKR020W VPS5Q92331 675 aa3.52□□□□□ -1.85
VPS51YKR020W SMC4Q12267 1418 aa3.52□□□□□ -1.85
VPS51YKR020W TUF1P02992 437 aaKnown RBP3.51□□□□□ -1.85
VPS51YKR020W WHI2P12611 486 aa3.51□□□□□ -1.85
VPS51YKR020W APN1P22936 367 aa3.51□□□□□ -1.85
VPS51YKR020W PTP1P25044 335 aa3.51□□□□□ -1.85
VPS51YKR020W MRPL9P31334 269 aa3.51□□□□□ -1.85
VPS51YKR020W TFC4P33339 1025 aa3.51□□□□□ -1.85
VPS51YKR020W EAF5P39995 279 aa3.51□□□□□ -1.85
VPS51YKR020W ATP23P53722 227 aa3.51□□□□□ -1.85
VPS51YKR020W MTD1Q02046 320 aaKnown RBP3.51□□□□□ -1.85
VPS51YKR020W GFD1Q04839 188 aaKnown RBP3.51□□□□□ -1.85
VPS51YKR020W ICT1Q12385 394 aa3.51□□□□□ -1.85
VPS51YKR020W NTE1Q04958 1679 aa3.5□□□□□ -1.85
VPS51YKR020W BET2P20133 325 aa3.5□□□□□ -1.85
VPS51YKR020W DSS4P32601 143 aa3.5□□□□□ -1.85
VPS51YKR020W CCL1P37366 393 aa3.5□□□□□ -1.85
VPS51YKR020W YBR071WP38243 211 aa3.5□□□□□ -1.85
VPS51YKR020W IRC5P43610 853 aa3.5□□□□□ -1.85
VPS51YKR020W SAP4P53036 818 aa3.5□□□□□ -1.85
VPS51YKR020W YOR378WQ08902 515 aa3.5□□□□□ -1.85
VPS51YKR020W AQY1P0CD91 305 aa3.49□□□□□ -1.85
VPS51YKR020W YPK1P12688 680 aaKnown RBP3.49□□□□□ -1.85
VPS51YKR020W ARG1P22768 420 aa3.49□□□□□ -1.85
VPS51YKR020W MBR1P23493 339 aa3.49□□□□□ -1.85
VPS51YKR020W RPC34P32910 317 aa3.49□□□□□ -1.85
VPS51YKR020W YFL015CP43578 164 aa3.49□□□□□ -1.85
VPS51YKR020W GLO1P50107 326 aa3.49□□□□□ -1.85
VPS51YKR020W MNT2P53059 558 aa3.49□□□□□ -1.85
VPS51YKR020W SLD3P53135 668 aa3.49□□□□□ -1.85
VPS51YKR020W HOL1P53389 586 aa3.49□□□□□ -1.85
VPS51YKR020W WAR1Q03631 944 aa3.49□□□□□ -1.85
VPS51YKR020W PEX15Q08215 383 aa3.49□□□□□ -1.85
VPS51YKR020W HOS1Q12214 470 aa3.49□□□□□ -1.85
VPS51YKR020W SPP41P38904 1435 aa3.49□□□□□ -1.85
VPS51YKR020W YRF1-1P0CX20 1796 aa3.48□□□□□ -1.85
VPS51YKR020W YRF1-5P0CX21 1796 aa3.48□□□□□ -1.85
VPS51YKR020W YRF1-8P0CX22 1796 aa3.48□□□□□ -1.85
VPS51YKR020W RPO21P04050 1733 aaKnown RBP3.48□□□□□ -1.85
VPS51YKR020W TRM732Q03496 1420 aa3.48□□□□□ -1.85
VPS51YKR020W CWH43P25618 953 aa3.48□□□□□ -1.85
VPS51YKR020W STB5P38699 743 aa3.48□□□□□ -1.85
VPS51YKR020W NET1P47035 1189 aa3.48□□□□□ -1.85
VPS51YKR020W BNA3P47039 444 aaKnown RBP3.48□□□□□ -1.85
VPS51YKR020W PEX14P53112 341 aa3.48□□□□□ -1.85
VPS51YKR020W COG6P53959 839 aa3.48□□□□□ -1.85
VPS51YKR020W USA1Q03714 838 aa3.48□□□□□ -1.85
VPS51YKR020W PHM6Q05637 104 aa3.48□□□□□ -1.85
VPS51YKR020W VTH1P40438 1549 aa3.48□□□□□ -1.85
VPS51YKR020W VTH2P40890 1549 aa3.48□□□□□ -1.85
VPS51YKR020W MYO4P32492 1471 aa3.47□□□□□ -1.85
VPS51YKR020W MET5P47169 1442 aa3.47□□□□□ -1.85
VPS51YKR020W MLP2P40457 1679 aa3.47□□□□□ -1.85
VPS51YKR020W HEM12P32347 362 aaPredicted RBP3.47□□□□□ -1.85
VPS51YKR020W LTP1P40347 161 aa3.47□□□□□ -1.85
VPS51YKR020W IRC3Q06683 689 aa3.47□□□□□ -1.85
VPS51YKR020W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
VPS51YKR020W PCL8Q08966 492 aa3.47□□□□□ -1.85
VPS51YKR020W RTK1Q12100 620 aaPredicted RBP3.47□□□□□ -1.85
VPS51YKR020W YMR084WA2P2R3 262 aa3.46□□□□□ -1.86
VPS51YKR020W URA3P03962 267 aa3.46□□□□□ -1.86
VPS51YKR020W STL1P39932 569 aa3.46□□□□□ -1.86
VPS51YKR020W EMP65P40085 556 aa3.46□□□□□ -1.86
VPS51YKR020W STP1Q00947 519 aa3.46□□□□□ -1.86
VPS51YKR020W AHA1Q12449 350 aaKnown RBP3.46□□□□□ -1.86
VPS51YKR020W TSC11P40061 1430 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms