RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W HOG1P32485 435 aa2.11□□□□□ -2.07
PFD1YJL179W SRP40P32583 406 aaPredicted RBP2.11□□□□□ -2.07
PFD1YJL179W BEM4P39011 633 aa2.11□□□□□ -2.07
PFD1YJL179W YEL076CP39971 216 aa2.11□□□□□ -2.07
PFD1YJL179W YFL015CP43578 164 aa2.11□□□□□ -2.07
PFD1YJL179W NOP7P53261 605 aaKnown RBP2.11□□□□□ -2.07
PFD1YJL179W FDC1Q03034 503 aa2.11□□□□□ -2.07
PFD1YJL179W COG8Q04632 607 aa2.11□□□□□ -2.07
PFD1YJL179W MDM12Q92328 271 aa2.11□□□□□ -2.07
PFD1YJL179W RAD9P14737 1309 aa2.11□□□□□ -2.07
PFD1YJL179W RTC1Q08281 1341 aa2.11□□□□□ -2.07
PFD1YJL179W KRE5P22023 1365 aa2.1□□□□□ -2.07
PFD1YJL179W NUP192P47054 1683 aa2.1□□□□□ -2.07
PFD1YJL179W YMR085WP0CF18 432 aa2.1□□□□□ -2.07
PFD1YJL179W AIM17P23180 465 aaKnown RBP2.1□□□□□ -2.07
PFD1YJL179W MNN4P36044 1178 aa2.1□□□□□ -2.07
PFD1YJL179W TAF5P38129 798 aa2.1□□□□□ -2.07
PFD1YJL179W MTG2P38860 518 aa2.1□□□□□ -2.07
PFD1YJL179W COP1P53622 1201 aaKnown RBP2.1□□□□□ -2.07
PFD1YJL179W RPL15BP54780 204 aaPredicted RBP2.1□□□□□ -2.07
PFD1YJL179W RPS15Q01855 142 aaKnown RBP2.1□□□□□ -2.07
PFD1YJL179W HLR1Q04429 423 aa2.1□□□□□ -2.07
PFD1YJL179W VBA4Q04602 768 aaKnown RBP2.1□□□□□ -2.07
PFD1YJL179W VHS3Q08438 674 aa2.1□□□□□ -2.07
PFD1YJL179W BCK1Q01389 1478 aa2.09□□□□□ -2.07
PFD1YJL179W CDC9P04819 755 aa2.09□□□□□ -2.07
PFD1YJL179W PRP22P24384 1145 aaKnown RBP2.09□□□□□ -2.07
PFD1YJL179W FAA2P39518 744 aa2.09□□□□□ -2.07
PFD1YJL179W YIL152WP40455 235 aa2.09□□□□□ -2.07
PFD1YJL179W SAE2P46946 345 aa2.09□□□□□ -2.07
PFD1YJL179W SPO1P53541 631 aa2.09□□□□□ -2.07
PFD1YJL179W YNR029CP53729 429 aaKnown RBP2.09□□□□□ -2.07
PFD1YJL179W BOP3P53958 396 aa2.09□□□□□ -2.07
PFD1YJL179W ORC1P54784 914 aaPredicted RBP2.09□□□□□ -2.07
PFD1YJL179W EFR3Q03653 782 aaKnown RBP2.09□□□□□ -2.07
PFD1YJL179W GFD1Q04839 188 aaKnown RBP2.09□□□□□ -2.07
PFD1YJL179W DCS2Q12123 353 aa2.09□□□□□ -2.07
PFD1YJL179W CFT1Q06632 1357 aaKnown RBP2.09□□□□□ -2.08
PFD1YJL179W IME1P21190 360 aa2.08□□□□□ -2.08
PFD1YJL179W FMP46P36141 133 aaKnown RBP2.08□□□□□ -2.08
PFD1YJL179W ESL2P36168 1195 aa2.08□□□□□ -2.08
PFD1YJL179W YHR202WP38887 602 aa2.08□□□□□ -2.08
PFD1YJL179W NUG1P40010 520 aaKnown RBP2.08□□□□□ -2.08
PFD1YJL179W BUD17P53727 317 aa2.08□□□□□ -2.08
PFD1YJL179W YPL216WQ08964 1102 aa2.08□□□□□ -2.08
PFD1YJL179W AIM44Q99299 758 aa2.08□□□□□ -2.08
PFD1YJL179W TY1B-NL2Q99337 1749 aaKnown RBP2.08□□□□□ -2.08
PFD1YJL179W HOP1P20050 605 aa2.07□□□□□ -2.08
PFD1YJL179W LOT5P34234 306 aa2.07□□□□□ -2.08
PFD1YJL179W EXO84P38261 753 aa2.07□□□□□ -2.08
PFD1YJL179W TMN3P40071 706 aa2.07□□□□□ -2.08
PFD1YJL179W MDV1P47025 714 aa2.07□□□□□ -2.08
PFD1YJL179W SAP4P53036 818 aa2.07□□□□□ -2.08
PFD1YJL179W HUL5P53119 910 aa2.07□□□□□ -2.08
PFD1YJL179W GPD1Q00055 391 aaKnown RBP2.07□□□□□ -2.08
PFD1YJL179W MFM1Q02783 413 aa2.07□□□□□ -2.08
PFD1YJL179W RCR2Q03446 210 aaKnown RBP2.07□□□□□ -2.08
PFD1YJL179W YMR317WQ04893 1140 aa2.07□□□□□ -2.08
PFD1YJL179W TPO3Q06451 622 aa2.07□□□□□ -2.08
PFD1YJL179W TGS1Q12052 315 aa2.07□□□□□ -2.08
PFD1YJL179W SEC3P33332 1336 aaKnown RBP2.07□□□□□ -2.08
PFD1YJL179W ACO1P19414 778 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
PFD1YJL179W SPE2P21182 396 aa2.06□□□□□ -2.08
PFD1YJL179W GSY1P23337 708 aa2.06□□□□□ -2.08
PFD1YJL179W IMG2P25642 146 aaPredicted RBP2.06□□□□□ -2.08
PFD1YJL179W YJU2P28320 278 aaPredicted RBP2.06□□□□□ -2.08
PFD1YJL179W BRN1P38170 754 aa2.06□□□□□ -2.08
PFD1YJL179W PPE1P38796 400 aa2.06□□□□□ -2.08
PFD1YJL179W CHZ1P40019 153 aaPredicted RBP2.06□□□□□ -2.08
PFD1YJL179W IRC7P43623 340 aa2.06□□□□□ -2.08
PFD1YJL179W SNU71P53207 620 aaKnown RBP2.06□□□□□ -2.08
PFD1YJL179W YGR054WP53235 642 aaKnown RBP2.06□□□□□ -2.08
PFD1YJL179W FCP1Q03254 732 aa2.06□□□□□ -2.08
PFD1YJL179W PPN1Q04119 674 aa2.06□□□□□ -2.08
PFD1YJL179W UBX3Q12229 455 aa2.06□□□□□ -2.08
PFD1YJL179W TY3B-IQ7LHG5 1498 aaKnown RBP2.06□□□□□ -2.08
PFD1YJL179W CET1O13297 549 aaPredicted RBP2.05□□□□□ -2.08
PFD1YJL179W SRD1P09007 221 aa2.05□□□□□ -2.08
PFD1YJL179W RNR3P21672 869 aaKnown RBP2.05□□□□□ -2.08
PFD1YJL179W YCR043CP25361 127 aa2.05□□□□□ -2.08
PFD1YJL179W LSB5P25369 354 aa2.05□□□□□ -2.08
PFD1YJL179W DHR2P36009 735 aaPredicted RBP2.05□□□□□ -2.08
PFD1YJL179W PAM1P37304 830 aaKnown RBP2.05□□□□□ -2.08
PFD1YJL179W YPT10P38146 199 aa2.05□□□□□ -2.08
PFD1YJL179W TOM71P38825 639 aaKnown RBP2.05□□□□□ -2.08
PFD1YJL179W YIR016WP40572 265 aa2.05□□□□□ -2.08
PFD1YJL179W BUD8P41698 603 aa2.05□□□□□ -2.08
PFD1YJL179W VTC3Q02725 835 aa2.05□□□□□ -2.08
PFD1YJL179W HRD3Q05787 833 aa2.05□□□□□ -2.08
PFD1YJL179W ATG33Q06485 197 aa2.05□□□□□ -2.08
PFD1YJL179W COQ3P27680 312 aa2.04□□□□□ -2.08
PFD1YJL179W CAP1P28495 268 aaKnown RBP2.04□□□□□ -2.08
PFD1YJL179W YKU70P32807 602 aa2.04□□□□□ -2.08
PFD1YJL179W CCL1P37366 393 aa2.04□□□□□ -2.08
PFD1YJL179W MAL31P38156 614 aa2.04□□□□□ -2.08
PFD1YJL179W DOT6P40059 670 aaKnown RBP2.04□□□□□ -2.08
PFD1YJL179W YIL092WP40497 633 aa2.04□□□□□ -2.08
PFD1YJL179W TES1P41903 349 aaKnown RBP2.04□□□□□ -2.08
PFD1YJL179W PXA1P41909 870 aa2.04□□□□□ -2.08
PFD1YJL179W USA1Q03714 838 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms