RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	CDC5	P32562	705 aa		2.74	□□□□□ -1.97
URM1	YIL008W	SSP120	P39931	234 aa	Known RBP	2.74	□□□□□ -1.97
URM1	YIL008W	STL1	P39932	569 aa		2.74	□□□□□ -1.97
URM1	YIL008W	MAD2	P40958	196 aa		2.74	□□□□□ -1.97
URM1	YIL008W	PSA1	P41940	361 aa	Known RBP	2.74	□□□□□ -1.97
URM1	YIL008W	BST1	P43571	1029 aa		2.74	□□□□□ -1.97
URM1	YIL008W	NMD5	P46970	1048 aa		2.74	□□□□□ -1.97
URM1	YIL008W	YJR120W	P47157	116 aa		2.74	□□□□□ -1.97
URM1	YIL008W	COG6	P53959	839 aa		2.74	□□□□□ -1.97
URM1	YIL008W	ECM38	Q05902	660 aa	Predicted RBP	2.74	□□□□□ -1.97
URM1	YIL008W	BSP1	Q06604	576 aa		2.74	□□□□□ -1.97
URM1	YIL008W	PEX15	Q08215	383 aa		2.74	□□□□□ -1.97
URM1	YIL008W	CRT10	Q08226	957 aa		2.74	□□□□□ -1.97
URM1	YIL008W	PCL8	Q08966	492 aa		2.74	□□□□□ -1.97
URM1	YIL008W	RTK1	Q12100	620 aa	Predicted RBP	2.74	□□□□□ -1.97
URM1	YIL008W	HOS1	Q12214	470 aa		2.74	□□□□□ -1.97
URM1	YIL008W	RDL1	Q12305	139 aa	Known RBP	2.74	□□□□□ -1.97
URM1	YIL008W	KAR1	P11927	433 aa		2.73	□□□□□ -1.97
URM1	YIL008W	CBP3	P21560	335 aa		2.73	□□□□□ -1.97
URM1	YIL008W	PET309	P32522	965 aa	Predicted RBP	2.73	□□□□□ -1.97
URM1	YIL008W	SDH8	P38345	138 aa		2.73	□□□□□ -1.97
URM1	YIL008W	SNO3	P43544	222 aa		2.73	□□□□□ -1.97
URM1	YIL008W	SAE2	P46946	345 aa		2.73	□□□□□ -1.97
URM1	YIL008W	BPL1	P48445	690 aa	Predicted RBP	2.73	□□□□□ -1.97
URM1	YIL008W	YNR071C	P53757	342 aa		2.73	□□□□□ -1.97
URM1	YIL008W	ERG13	P54839	491 aa	Known RBP	2.73	□□□□□ -1.97
URM1	YIL008W	STP1	Q00947	519 aa		2.73	□□□□□ -1.97
URM1	YIL008W	DIN7	Q12086	430 aa		2.73	□□□□□ -1.97
URM1	YIL008W	RGT2	Q12300	763 aa		2.73	□□□□□ -1.97
URM1	YIL008W	AHA1	Q12449	350 aa	Known RBP	2.73	□□□□□ -1.97
URM1	YIL008W	TSR4	P25040	408 aa		2.72	□□□□□ -1.97
URM1	YIL008W	YJU2	P28320	278 aa	Predicted RBP	2.72	□□□□□ -1.97
URM1	YIL008W	ENP1	P38333	483 aa	Known RBP	2.72	□□□□□ -1.97
URM1	YIL008W	PAF1	P38351	445 aa		2.72	□□□□□ -1.97
URM1	YIL008W	YIL092W	P40497	633 aa		2.72	□□□□□ -1.97
URM1	YIL008W	COS12	P53053	380 aa		2.72	□□□□□ -1.97
URM1	YIL008W	YNL092W	P53934	400 aa		2.72	□□□□□ -1.97
URM1	YIL008W	HRD3	Q05787	833 aa		2.72	□□□□□ -1.97
URM1	YIL008W	SPN1	Q06505	410 aa	Predicted RBP	2.72	□□□□□ -1.97
URM1	YIL008W	SLX4	Q12098	748 aa		2.72	□□□□□ -1.97
URM1	YIL008W	PRS5	Q12265	496 aa	Known RBP	2.72	□□□□□ -1.97
URM1	YIL008W	URE2	P23202	354 aa	Known RBP	2.71	□□□□□ -1.98
URM1	YIL008W	PLC1	P32383	869 aa		2.71	□□□□□ -1.98
URM1	YIL008W	STB5	P38699	743 aa		2.71	□□□□□ -1.98
URM1	YIL008W	RRP8	P38961	392 aa	Known RBP	2.71	□□□□□ -1.98
URM1	YIL008W	LAS21	P40367	830 aa		2.71	□□□□□ -1.98
URM1	YIL008W	GSM1	P42950	618 aa		2.71	□□□□□ -1.98
URM1	YIL008W	YNL058C	P53947	316 aa		2.71	□□□□□ -1.98
URM1	YIL008W	IDP3	P53982	420 aa	Known RBP	2.71	□□□□□ -1.98
URM1	YIL008W	RSC9	Q03124	581 aa		2.71	□□□□□ -1.98
URM1	YIL008W	RAD33	Q04231	177 aa		2.71	□□□□□ -1.98
URM1	YIL008W	TRI1	Q05024	226 aa		2.71	□□□□□ -1.98
URM1	YIL008W	PHM6	Q05637	104 aa		2.71	□□□□□ -1.98
URM1	YIL008W	PSF3	Q12146	194 aa		2.71	□□□□□ -1.98
URM1	YIL008W	YLR111W	Q12528	110 aa		2.71	□□□□□ -1.98
URM1	YIL008W	BI2	P03873	423 aa		2.7	□□□□□ -1.98
URM1	YIL008W	CHO2	P05374	869 aa	Known RBP	2.7	□□□□□ -1.98
URM1	YIL008W	MRC1	P25588	1096 aa		2.7	□□□□□ -1.98
URM1	YIL008W	PRP45	P28004	379 aa	Predicted RBP	2.7	□□□□□ -1.98
URM1	YIL008W	GDA1	P32621	518 aa		2.7	□□□□□ -1.98
URM1	YIL008W	ECM32	P32644	1121 aa	Known RBP	2.7	□□□□□ -1.98
URM1	YIL008W	TFC4	P33339	1025 aa		2.7	□□□□□ -1.98
URM1	YIL008W	MAM1	P40065	302 aa		2.7	□□□□□ -1.98
URM1	YIL008W	RAD26	P40352	1085 aa		2.7	□□□□□ -1.98
URM1	YIL008W	IDS2	P46958	469 aa		2.7	□□□□□ -1.98
URM1	YIL008W	PEX14	P53112	341 aa		2.7	□□□□□ -1.98
URM1	YIL008W	MPS1	P54199	764 aa		2.7	□□□□□ -1.98
URM1	YIL008W	TPO3	Q06451	622 aa		2.7	□□□□□ -1.98
URM1	YIL008W	CYK3	Q07533	885 aa		2.7	□□□□□ -1.98
URM1	YIL008W	DBP10	Q12389	995 aa	Known RBP	2.7	□□□□□ -1.98
URM1	YIL008W	TGL1	P34163	548 aa		2.69	□□□□□ -1.98
URM1	YIL008W	TAF5	P38129	798 aa		2.69	□□□□□ -1.98
URM1	YIL008W	MTG2	P38860	518 aa		2.69	□□□□□ -1.98
URM1	YIL008W	VFA1	P40080	203 aa		2.69	□□□□□ -1.98
URM1	YIL008W	CIR1	P42940	261 aa		2.69	□□□□□ -1.98
URM1	YIL008W	COG2	P53271	262 aa		2.69	□□□□□ -1.98
URM1	YIL008W	FOL1	P53848	824 aa		2.69	□□□□□ -1.98
URM1	YIL008W	UBP16	Q02863	499 aa		2.69	□□□□□ -1.98
URM1	YIL008W	YPL071C	Q02864	156 aa		2.69	□□□□□ -1.98
URM1	YIL008W	GEP3	Q08622	556 aa		2.69	□□□□□ -1.98
URM1	YIL008W	VAS1	P07806	1104 aa	Known RBP	2.68	□□□□□ -1.98
URM1	YIL008W	YMR085W	P0CF18	432 aa		2.68	□□□□□ -1.98
URM1	YIL008W	AMD2	P22580	549 aa		2.68	□□□□□ -1.98
URM1	YIL008W	PHO3	P24031	467 aa		2.68	□□□□□ -1.98
URM1	YIL008W	SDS22	P36047	338 aa		2.68	□□□□□ -1.98
URM1	YIL008W	LNP1	P38878	278 aa		2.68	□□□□□ -1.98
URM1	YIL008W	SCS2	P40075	244 aa	Known RBP	2.68	□□□□□ -1.98
URM1	YIL008W	IRC7	P43623	340 aa		2.68	□□□□□ -1.98
URM1	YIL008W	PUS4	P48567	403 aa	Known RBP	2.68	□□□□□ -1.98
URM1	YIL008W	YML119W	Q03208	357 aa		2.68	□□□□□ -1.98
URM1	YIL008W	TRS31	Q03337	283 aa		2.68	□□□□□ -1.98
URM1	YIL008W	ENT2	Q05785	613 aa		2.68	□□□□□ -1.98
URM1	YIL008W	CRC1	Q12289	327 aa		2.68	□□□□□ -1.98
URM1	YIL008W	PNO1	Q99216	274 aa	Known RBP	2.68	□□□□□ -1.98
URM1	YIL008W	CET1	O13297	549 aa	Predicted RBP	2.67	□□□□□ -1.98
URM1	YIL008W	CTT1	P06115	562 aa		2.67	□□□□□ -1.98
URM1	YIL008W	KGD2	P19262	463 aa	Predicted RBP	2.67	□□□□□ -1.98
URM1	YIL008W	MAK32	P23060	363 aa		2.67	□□□□□ -1.98
URM1	YIL008W	RRP43	P25359	394 aa	Predicted RBP	2.67	□□□□□ -1.98
URM1	YIL008W	YCR061W	P25639	631 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms