RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W SMF1P38925 575 aa3.77□□□□□ -1.81
CAF130YGR134W TAN1P53072 289 aaPredicted RBP3.77□□□□□ -1.81
CAF130YGR134W CSL4P53859 292 aaPredicted RBP3.77□□□□□ -1.81
CAF130YGR134W INN1P53901 409 aa3.77□□□□□ -1.81
CAF130YGR134W MGR3Q04472 501 aa3.77□□□□□ -1.81
CAF130YGR134W RSF1Q05043 376 aa3.77□□□□□ -1.81
CAF130YGR134W DIB1Q06819 143 aaPredicted RBP3.77□□□□□ -1.81
CAF130YGR134W PSF3Q12146 194 aa3.77□□□□□ -1.81
CAF130YGR134W YEL076C-AP0CX16 216 aa3.76□□□□□ -1.81
CAF130YGR134W YLR464WP0CX17 216 aa3.76□□□□□ -1.81
CAF130YGR134W SPB1P25582 841 aaPredicted RBP3.76□□□□□ -1.81
CAF130YGR134W SUR1P33300 382 aa3.76□□□□□ -1.81
CAF130YGR134W YRO2P38079 344 aa3.76□□□□□ -1.81
CAF130YGR134W THI2P38141 450 aa3.76□□□□□ -1.81
CAF130YGR134W YEL076CP39971 216 aa3.76□□□□□ -1.81
CAF130YGR134W RLP7P40693 322 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W BUD27P43573 796 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
CAF130YGR134W PEF1P53238 335 aa3.76□□□□□ -1.81
CAF130YGR134W SEC5P89102 971 aa3.76□□□□□ -1.81
CAF130YGR134W MRD1Q06106 887 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W GET3Q12154 354 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W VPS15P22219 1454 aa3.76□□□□□ -1.81
CAF130YGR134W DNF1P32660 1571 aa3.76□□□□□ -1.81
CAF130YGR134W YMR084WA2P2R3 262 aa3.76□□□□□ -1.81
CAF130YGR134W ADE8P04161 214 aa3.76□□□□□ -1.81
CAF130YGR134W MIS1P09440 975 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W ARO3P14843 370 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W PET127P32606 800 aa3.76□□□□□ -1.81
CAF130YGR134W YEL043WP32618 956 aa3.76□□□□□ -1.81
CAF130YGR134W PIM1P36775 1133 aa3.76□□□□□ -1.81
CAF130YGR134W YSW1P38280 609 aa3.76□□□□□ -1.81
CAF130YGR134W FLC2P39719 783 aa3.76□□□□□ -1.81
CAF130YGR134W ARC1P46672 376 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W SRT1Q03175 343 aa3.76□□□□□ -1.81
CAF130YGR134W MCP2Q06567 569 aa3.76□□□□□ -1.81
CAF130YGR134W SFG1Q12507 346 aa3.76□□□□□ -1.81
CAF130YGR134W TUB2P02557 457 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W SES1P07284 462 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W POL3P15436 1097 aa3.76□□□□□ -1.81
CAF130YGR134W TRX1P22217 103 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W GEX1P25596 615 aa3.76□□□□□ -1.81
CAF130YGR134W UTP9P38882 575 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W TIF11P38912 153 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W SHU2P38957 223 aa3.76□□□□□ -1.81
CAF130YGR134W ARB1P40024 610 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W EFM4P40516 257 aa3.76□□□□□ -1.81
CAF130YGR134W LCB2P40970 561 aa3.76□□□□□ -1.81
CAF130YGR134W PTK2P47116 818 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W NGL2Q03264 515 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W RMT2Q03305 412 aa3.76□□□□□ -1.81
CAF130YGR134W HMO1Q03973 246 aaKnown RBP3.76□□□□□ -1.81
CAF130YGR134W SOV1Q04748 898 aa3.76□□□□□ -1.81
CAF130YGR134W VAM6Q07468 1049 aa3.76□□□□□ -1.81
CAF130YGR134W YDL129WQ07555 291 aa3.76□□□□□ -1.81
CAF130YGR134W VCX1Q99385 411 aa3.76□□□□□ -1.81
CAF130YGR134W TPK1P06244 397 aa3.75□□□□□ -1.81
CAF130YGR134W HNM1P19807 563 aa3.75□□□□□ -1.81
CAF130YGR134W YCK1P23291 538 aa3.75□□□□□ -1.81
CAF130YGR134W BUD2P33314 1104 aa3.75□□□□□ -1.81
CAF130YGR134W WHI3P34761 661 aaKnown RBP3.75□□□□□ -1.81
CAF130YGR134W FTH1P38310 465 aa3.75□□□□□ -1.81
CAF130YGR134W DON1Q05610 365 aa3.75□□□□□ -1.81
CAF130YGR134W KAP95Q06142 861 aaKnown RBP3.75□□□□□ -1.81
CAF130YGR134W ARO1P08566 1588 aaKnown RBP3.75□□□□□ -1.81
CAF130YGR134W YLR419WQ06698 1435 aaKnown RBP3.75□□□□□ -1.81
CAF130YGR134W PHO5P00635 467 aa3.75□□□□□ -1.81
CAF130YGR134W GCN4P03069 281 aa3.75□□□□□ -1.81
CAF130YGR134W AMS1P22855 1083 aa3.75□□□□□ -1.81
CAF130YGR134W YCK2P23292 546 aaKnown RBP3.75□□□□□ -1.81
CAF130YGR134W PEX32P38292 413 aa3.75□□□□□ -1.81
CAF130YGR134W NTC20P38302 140 aaPredicted RBP3.75□□□□□ -1.81
CAF130YGR134W MEC3Q02574 474 aa3.75□□□□□ -1.81
CAF130YGR134W TRI1Q05024 226 aa3.75□□□□□ -1.81
CAF130YGR134W YPR172WQ06608 200 aa3.75□□□□□ -1.81
CAF130YGR134W AAD4Q07747 329 aa3.75□□□□□ -1.81
CAF130YGR134W UAF30Q08747 228 aa3.75□□□□□ -1.81
CAF130YGR134W ACM1Q08981 209 aa3.75□□□□□ -1.81
CAF130YGR134W LEU9Q12166 604 aaKnown RBP3.75□□□□□ -1.81
CAF130YGR134W SUL2Q12325 893 aa3.75□□□□□ -1.81
CAF130YGR134W PTC5Q12511 572 aa3.75□□□□□ -1.81
CAF130YGR134W NOT3P06102 836 aaKnown RBP3.74□□□□□ -1.81
CAF130YGR134W NUC1P08466 329 aa3.74□□□□□ -1.81
CAF130YGR134W PRP28P23394 588 aa3.74□□□□□ -1.81
CAF130YGR134W CLB4P24871 460 aa3.74□□□□□ -1.81
CAF130YGR134W KIP1P28742 1111 aa3.74□□□□□ -1.81
CAF130YGR134W SRO77P38163 1010 aa3.74□□□□□ -1.81
CAF130YGR134W MIP6P38760 659 aaKnown RBP3.74□□□□□ -1.81
CAF130YGR134W MPT5P39016 859 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
CAF130YGR134W SSP120P39931 234 aaKnown RBP3.74□□□□□ -1.81
CAF130YGR134W RGI2P40188 164 aa3.74□□□□□ -1.81
CAF130YGR134W INA22P40576 216 aa3.74□□□□□ -1.81
CAF130YGR134W ENP2P48234 707 aaKnown RBP3.74□□□□□ -1.81
CAF130YGR134W NUP84P52891 726 aa3.74□□□□□ -1.81
CAF130YGR134W HST1P53685 503 aa3.74□□□□□ -1.81
CAF130YGR134W SFB2P53953 876 aa3.74□□□□□ -1.81
CAF130YGR134W CIK1Q01649 594 aa3.74□□□□□ -1.81
CAF130YGR134W RRT8Q08219 342 aa3.74□□□□□ -1.81
CAF130YGR134W CDC19P00549 500 aaKnown RBP3.74□□□□□ -1.81
CAF130YGR134W CLB1P24868 471 aa3.74□□□□□ -1.81
CAF130YGR134W CRM1P30822 1084 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms