RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W YJR079WP47126 109 aa5.64□□□□□ -1.51
SHE10YGL228W UTP8P53276 713 aaKnown RBP5.64□□□□□ -1.51
SHE10YGL228W SPO71Q03868 1245 aa5.64□□□□□ -1.51
SHE10YGL228W PMT7Q06644 662 aa5.64□□□□□ -1.51
SHE10YGL228W FRA1Q07825 749 aa5.64□□□□□ -1.51
SHE10YGL228W YPQ1Q12010 308 aa5.64□□□□□ -1.51
SHE10YGL228W GPM3Q12326 303 aa5.64□□□□□ -1.51
SHE10YGL228W LPX1Q12405 387 aaKnown RBP5.64□□□□□ -1.51
SHE10YGL228W SEY1Q99287 776 aa5.64□□□□□ -1.51
SHE10YGL228W AI5_ALPHAQ9ZZX1 630 aa5.64□□□□□ -1.51
SHE10YGL228W TEF1P02994 458 aaKnown RBP5.63□□□□□ -1.51
SHE10YGL228W IDI1P15496 288 aa5.63□□□□□ -1.51
SHE10YGL228W ADY2P25613 283 aa5.63□□□□□ -1.51
SHE10YGL228W ECM13P38195 257 aa5.63□□□□□ -1.51
SHE10YGL228W SFB3P38810 929 aa5.63□□□□□ -1.51
SHE10YGL228W YEL028WP39989 153 aa5.63□□□□□ -1.51
SHE10YGL228W SCC4P40090 624 aa5.63□□□□□ -1.51
SHE10YGL228W MND2P40577 368 aa5.63□□□□□ -1.51
SHE10YGL228W EMW1P42842 904 aaKnown RBP5.63□□□□□ -1.51
SHE10YGL228W RPS10BP46784 105 aaKnown RBP5.63□□□□□ -1.51
SHE10YGL228W TCB2P48231 1178 aa5.63□□□□□ -1.51
SHE10YGL228W ZIP2P53061 704 aa5.63□□□□□ -1.51
SHE10YGL228W NRD1P53617 575 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
SHE10YGL228W TRM112P53738 135 aaPredicted RBP5.63□□□□□ -1.51
SHE10YGL228W COG6P53959 839 aa5.63□□□□□ -1.51
SHE10YGL228W VPS9P54787 451 aa5.63□□□□□ -1.51
SHE10YGL228W UTP13Q05946 817 aaKnown RBP5.63□□□□□ -1.51
SHE10YGL228W RPS10AQ08745 105 aaPredicted RBP5.63□□□□□ -1.51
SHE10YGL228W YOR387CQ08910 206 aa5.63□□□□□ -1.51
SHE10YGL228W EFG1Q3E705 233 aaKnown RBP5.63□□□□□ -1.51
SHE10YGL228W QCR6P00127 147 aa5.62□□□□□ -1.51
SHE10YGL228W IMA3P0CW40 589 aa5.62□□□□□ -1.51
SHE10YGL228W IMA4P0CW41 589 aa5.62□□□□□ -1.51
SHE10YGL228W HSF1P10961 833 aa5.62□□□□□ -1.51
SHE10YGL228W YME1P32795 747 aa5.62□□□□□ -1.51
SHE10YGL228W RAD5P32849 1169 aaPredicted RBP5.62□□□□□ -1.51
SHE10YGL228W RPC37P36121 282 aa5.62□□□□□ -1.51
SHE10YGL228W NUP60P39705 539 aa5.62□□□□□ -1.51
SHE10YGL228W BTT1P40314 149 aaPredicted RBP5.62□□□□□ -1.51
SHE10YGL228W MNN11P46985 422 aaKnown RBP5.62□□□□□ -1.51
SHE10YGL228W YMR027WQ04371 470 aa5.62□□□□□ -1.51
SHE10YGL228W ARP9Q05123 467 aa5.62□□□□□ -1.51
SHE10YGL228W BSP1Q06604 576 aa5.62□□□□□ -1.51
SHE10YGL228W IMA2Q08295 589 aa5.62□□□□□ -1.51
SHE10YGL228W RUD3Q12234 484 aaKnown RBP5.62□□□□□ -1.51
SHE10YGL228W SVS1Q12254 260 aa5.62□□□□□ -1.51
SHE10YGL228W HIS1P00498 297 aaKnown RBP5.62□□□□□ -1.51
SHE10YGL228W ENO2P00925 437 aaKnown RBP5.62□□□□□ -1.51
SHE10YGL228W TSR4P25040 408 aa5.62□□□□□ -1.51
SHE10YGL228W ILV6P25605 309 aaKnown RBP5.62□□□□□ -1.51
SHE10YGL228W URA7P28274 579 aaKnown RBP5.62□□□□□ -1.51
SHE10YGL228W MET22P32179 357 aa5.62□□□□□ -1.51
SHE10YGL228W YAT2P40017 923 aa5.62□□□□□ -1.51
SHE10YGL228W KTR7P40504 517 aa5.62□□□□□ -1.51
SHE10YGL228W YFL012WP43580 148 aa5.62□□□□□ -1.51
SHE10YGL228W RTT101P47050 842 aa5.62□□□□□ -1.51
SHE10YGL228W TAN1P53072 289 aaPredicted RBP5.62□□□□□ -1.51
SHE10YGL228W COQ6P53318 479 aa5.62□□□□□ -1.51
SHE10YGL228W SHR3Q02774 210 aa5.62□□□□□ -1.51
SHE10YGL228W RPN4Q03465 531 aa5.62□□□□□ -1.51
SHE10YGL228W PIG1Q06216 648 aa5.62□□□□□ -1.51
SHE10YGL228W NRT1Q08485 598 aa5.62□□□□□ -1.51
SHE10YGL228W YPR117WQ06116 2489 aa5.61□□□□□ -1.51
SHE10YGL228W ILV2P07342 687 aaKnown RBP5.61□□□□□ -1.51
SHE10YGL228W GID7P25569 745 aa5.61□□□□□ -1.51
SHE10YGL228W KAR4P25583 335 aa5.61□□□□□ -1.51
SHE10YGL228W MSH1P25846 959 aa5.61□□□□□ -1.51
SHE10YGL228W PMI40P29952 429 aaKnown RBP5.61□□□□□ -1.51
SHE10YGL228W ISF1P32488 338 aa5.61□□□□□ -1.51
SHE10YGL228W OAF3P36023 863 aa5.61□□□□□ -1.51
SHE10YGL228W SMF2P38778 549 aa5.61□□□□□ -1.51
SHE10YGL228W UFE1P41834 346 aa5.61□□□□□ -1.51
SHE10YGL228W SAE2P46946 345 aa5.61□□□□□ -1.51
SHE10YGL228W BFA1P47113 574 aa5.61□□□□□ -1.51
SHE10YGL228W TRF5P48561 642 aaKnown RBP5.61□□□□□ -1.51
SHE10YGL228W GND2P53319 492 aa5.61□□□□□ -1.51
SHE10YGL228W YPR003CP53394 754 aa5.61□□□□□ -1.51
SHE10YGL228W TEP1P53916 434 aa5.61□□□□□ -1.51
SHE10YGL228W SLU7Q02775 382 aaKnown RBP5.61□□□□□ -1.51
SHE10YGL228W EAR1Q03212 550 aa5.61□□□□□ -1.51
SHE10YGL228W ADE13Q05911 482 aaKnown RBP5.61□□□□□ -1.51
SHE10YGL228W OMS1Q06668 471 aa5.61□□□□□ -1.51
SHE10YGL228W SWC7Q06707 132 aa5.61□□□□□ -1.51
SHE10YGL228W YDL073WQ07454 984 aa5.61□□□□□ -1.51
SHE10YGL228W AFI1Q99222 893 aa5.61□□□□□ -1.51
SHE10YGL228W ERR1P0CX10 437 aa5.6□□□□□ -1.51
SHE10YGL228W ERR2P0CX11 437 aa5.6□□□□□ -1.51
SHE10YGL228W KES1P35844 434 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W KAP104P38217 918 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W SAF1P38352 637 aa5.6□□□□□ -1.51
SHE10YGL228W ERR3P42222 437 aa5.6□□□□□ -1.51
SHE10YGL228W IML2P47031 731 aa5.6□□□□□ -1.51
SHE10YGL228W PSP1P50896 841 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W TIM13P53299 105 aa5.6□□□□□ -1.51
SHE10YGL228W ADI1Q03677 179 aa5.6□□□□□ -1.51
SHE10YGL228W INP2Q03824 705 aa5.6□□□□□ -1.51
SHE10YGL228W ECM38Q05902 660 aaPredicted RBP5.6□□□□□ -1.51
SHE10YGL228W GRX8Q05926 109 aa5.6□□□□□ -1.51
SHE10YGL228W AAD15Q08361 143 aa5.6□□□□□ -1.51
SHE10YGL228W OCA6Q12454 224 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms