RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W PRP45P28004 379 aaPredicted RBP3.88□□□□□ -1.79
LOC1YFR001W CDC5P32562 705 aa3.88□□□□□ -1.79
LOC1YFR001W TAF5P38129 798 aa3.88□□□□□ -1.79
LOC1YFR001W STB5P38699 743 aa3.88□□□□□ -1.79
LOC1YFR001W ACS1Q01574 713 aa3.88□□□□□ -1.79
LOC1YFR001W GFD1Q04839 188 aaKnown RBP3.88□□□□□ -1.79
LOC1YFR001W MRI1Q06489 411 aaKnown RBP3.88□□□□□ -1.79
LOC1YFR001W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
LOC1YFR001W ARP7Q12406 477 aa3.88□□□□□ -1.79
LOC1YFR001W YNL162W-AQ3E7A8 72 aa3.88□□□□□ -1.79
LOC1YFR001W YPK1P12688 680 aaKnown RBP3.87□□□□□ -1.79
LOC1YFR001W SDH8P38345 138 aa3.87□□□□□ -1.79
LOC1YFR001W SWD1P39706 426 aa3.87□□□□□ -1.79
LOC1YFR001W IMA5P40884 581 aa3.87□□□□□ -1.79
LOC1YFR001W YFL015CP43578 164 aa3.87□□□□□ -1.79
LOC1YFR001W ENT2Q05785 613 aa3.87□□□□□ -1.79
LOC1YFR001W THI7Q05998 598 aa3.87□□□□□ -1.79
LOC1YFR001W YMR084WA2P2R3 262 aa3.86□□□□□ -1.79
LOC1YFR001W HOM2P13663 365 aaKnown RBP3.86□□□□□ -1.79
LOC1YFR001W YLF2P38746 405 aa3.86□□□□□ -1.79
LOC1YFR001W VFA1P40080 203 aa3.86□□□□□ -1.79
LOC1YFR001W TAX4P47030 604 aa3.86□□□□□ -1.79
LOC1YFR001W PIP2P52960 996 aa3.86□□□□□ -1.79
LOC1YFR001W MET14Q02196 202 aa3.86□□□□□ -1.79
LOC1YFR001W AI5_ALPHAQ9ZZX1 630 aa3.86□□□□□ -1.79
LOC1YFR001W GAL1P04385 528 aa3.85□□□□□ -1.79
LOC1YFR001W HEM1P09950 548 aaPredicted RBP3.85□□□□□ -1.79
LOC1YFR001W PRE2P30656 287 aaKnown RBP3.85□□□□□ -1.79
LOC1YFR001W MRPL9P31334 269 aa3.85□□□□□ -1.79
LOC1YFR001W YKL133CP36066 463 aa3.85□□□□□ -1.79
LOC1YFR001W EXO1P39875 702 aa3.85□□□□□ -1.79
LOC1YFR001W POL31P46957 487 aa3.85□□□□□ -1.79
LOC1YFR001W IDS2P46958 469 aa3.85□□□□□ -1.79
LOC1YFR001W ATG36P46983 293 aa3.85□□□□□ -1.79
LOC1YFR001W YNL092WP53934 400 aa3.85□□□□□ -1.79
LOC1YFR001W TRS31Q03337 283 aa3.85□□□□□ -1.79
LOC1YFR001W WAR1Q03631 944 aa3.85□□□□□ -1.79
LOC1YFR001W CRD1Q07560 283 aa3.85□□□□□ -1.79
LOC1YFR001W PCL8Q08966 492 aa3.85□□□□□ -1.79
LOC1YFR001W YOL114CQ12322 202 aa3.85□□□□□ -1.79
LOC1YFR001W ATP4P05626 244 aa3.84□□□□□ -1.79
LOC1YFR001W AQY1P0CD91 305 aa3.84□□□□□ -1.79
LOC1YFR001W ORC2P32833 620 aa3.84□□□□□ -1.79
LOC1YFR001W RPC34P32910 317 aa3.84□□□□□ -1.79
LOC1YFR001W RRP8P38961 392 aaKnown RBP3.84□□□□□ -1.79
LOC1YFR001W MLC2Q06580 163 aa3.84□□□□□ -1.79
LOC1YFR001W AAD4Q07747 329 aa3.84□□□□□ -1.79
LOC1YFR001W CRT10Q08226 957 aa3.84□□□□□ -1.79
LOC1YFR001W SEC3P33332 1336 aaKnown RBP3.84□□□□□ -1.79
LOC1YFR001W ERG11P10614 530 aa3.83□□□□□ -1.8
LOC1YFR001W YCR061WP25639 631 aa3.83□□□□□ -1.8
LOC1YFR001W PTP2P29461 750 aa3.83□□□□□ -1.8
LOC1YFR001W HOT13P36078 116 aa3.83□□□□□ -1.8
LOC1YFR001W HIS6P40545 261 aa3.83□□□□□ -1.8
LOC1YFR001W OPT1P40897 799 aa3.83□□□□□ -1.8
LOC1YFR001W TDA10P42938 290 aa3.83□□□□□ -1.8
LOC1YFR001W MAD3P47074 515 aa3.83□□□□□ -1.8
LOC1YFR001W TEP1P53916 434 aa3.83□□□□□ -1.8
LOC1YFR001W CTT1P06115 562 aa3.82□□□□□ -1.8
LOC1YFR001W RPS7AP26786 190 aaKnown RBP3.82□□□□□ -1.8
LOC1YFR001W YJU2P28320 278 aaPredicted RBP3.82□□□□□ -1.8
LOC1YFR001W QRI7P43122 407 aa3.82□□□□□ -1.8
LOC1YFR001W YJL043WP47053 257 aa3.82□□□□□ -1.8
LOC1YFR001W BRE1Q07457 700 aaKnown RBP3.82□□□□□ -1.8
LOC1YFR001W YOL057WQ08225 711 aa3.82□□□□□ -1.8
LOC1YFR001W AHA1Q12449 350 aaKnown RBP3.82□□□□□ -1.8
LOC1YFR001W MSS18P08593 268 aa3.81□□□□□ -1.8
LOC1YFR001W AMD2P22580 549 aa3.81□□□□□ -1.8
LOC1YFR001W FRD1P32614 470 aaKnown RBP3.81□□□□□ -1.8
LOC1YFR001W GDA1P32621 518 aa3.81□□□□□ -1.8
LOC1YFR001W STT3P39007 718 aaKnown RBP3.81□□□□□ -1.8
LOC1YFR001W ARB1P40024 610 aaKnown RBP3.81□□□□□ -1.8
LOC1YFR001W SNM1P40993 198 aa3.81□□□□□ -1.8
LOC1YFR001W YML119WQ03208 357 aa3.81□□□□□ -1.8
LOC1YFR001W VPS64Q03944 604 aa3.81□□□□□ -1.8
LOC1YFR001W RAD33Q04231 177 aa3.81□□□□□ -1.8
LOC1YFR001W AIM6Q07716 390 aa3.81□□□□□ -1.8
LOC1YFR001W PGK1P00560 416 aaKnown RBP3.8□□□□□ -1.8
LOC1YFR001W CHO2P05374 869 aaKnown RBP3.8□□□□□ -1.8
LOC1YFR001W MDM10P18409 493 aa3.8□□□□□ -1.8
LOC1YFR001W NUP1P20676 1076 aa3.8□□□□□ -1.8
LOC1YFR001W APN1P22936 367 aa3.8□□□□□ -1.8
LOC1YFR001W MBR1P23493 339 aa3.8□□□□□ -1.8
LOC1YFR001W GSY2P27472 705 aa3.8□□□□□ -1.8
LOC1YFR001W ARO9P38840 513 aaPredicted RBP3.8□□□□□ -1.8
LOC1YFR001W MTG2P38860 518 aa3.8□□□□□ -1.8
LOC1YFR001W VPS8P39702 1274 aa3.8□□□□□ -1.8
LOC1YFR001W LAS21P40367 830 aa3.8□□□□□ -1.8
LOC1YFR001W SAE2P46946 345 aa3.8□□□□□ -1.8
LOC1YFR001W TAN1P53072 289 aaPredicted RBP3.8□□□□□ -1.8
LOC1YFR001W MOT3P54785 490 aaKnown RBP3.8□□□□□ -1.8
LOC1YFR001W RIM13Q03792 727 aa3.8□□□□□ -1.8
LOC1YFR001W SEG1Q04279 960 aa3.8□□□□□ -1.8
LOC1YFR001W CRF1Q04930 467 aa3.8□□□□□ -1.8
LOC1YFR001W HRD3Q05787 833 aa3.8□□□□□ -1.8
LOC1YFR001W RRP6Q12149 733 aaKnown RBP3.8□□□□□ -1.8
LOC1YFR001W NYV1Q12255 253 aa3.8□□□□□ -1.8
LOC1YFR001W Q0010Q9ZZX9 128 aa3.8□□□□□ -1.8
LOC1YFR001W SIR1P21691 654 aa3.79□□□□□ -1.8
LOC1YFR001W APM3P38153 483 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms