RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W RPB4P20433 221 aaPredicted RBP3.84□□□□□ -1.8
CHD1YER164W HXT1P32465 570 aa3.84□□□□□ -1.8
CHD1YER164W YSC83P32792 385 aa3.84□□□□□ -1.8
CHD1YER164W PIN4P34217 668 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
CHD1YER164W CUE2P36075 443 aaKnown RBP3.84□□□□□ -1.8
CHD1YER164W ALB1P47019 175 aaPredicted RBP3.84□□□□□ -1.8
CHD1YER164W ATP22P50273 684 aaPredicted RBP3.84□□□□□ -1.8
CHD1YER164W CST9Q06032 482 aa3.84□□□□□ -1.8
CHD1YER164W LSO2Q3E772 92 aaKnown RBP3.84□□□□□ -1.8
CHD1YER164W ADE4P04046 510 aaKnown RBP3.84□□□□□ -1.8
CHD1YER164W SEN2P16658 377 aa3.84□□□□□ -1.8
CHD1YER164W IRE1P32361 1115 aa3.84□□□□□ -1.8
CHD1YER164W BZZ1P38822 633 aa3.84□□□□□ -1.8
CHD1YER164W RTT102P53330 157 aa3.84□□□□□ -1.8
CHD1YER164W YNL146WP53906 100 aa3.84□□□□□ -1.8
CHD1YER164W SKI8Q02793 397 aaPredicted RBP3.84□□□□□ -1.8
CHD1YER164W USA1Q03714 838 aa3.84□□□□□ -1.8
CHD1YER164W SHS1Q07657 551 aa3.84□□□□□ -1.8
CHD1YER164W SOG2Q08817 791 aa3.84□□□□□ -1.8
CHD1YER164W THP3Q12049 470 aaKnown RBP3.84□□□□□ -1.8
CHD1YER164W YDL206WQ12424 762 aa3.84□□□□□ -1.8
CHD1YER164W FKS1P38631 1876 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W KEX2P13134 814 aa3.83□□□□□ -1.8
CHD1YER164W SAR1P20606 190 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W VID24P38263 362 aa3.83□□□□□ -1.8
CHD1YER164W SSO2P39926 295 aa3.83□□□□□ -1.8
CHD1YER164W EAF5P39995 279 aa3.83□□□□□ -1.8
CHD1YER164W SYG1P40528 902 aa3.83□□□□□ -1.8
CHD1YER164W PHB1P40961 287 aa3.83□□□□□ -1.8
CHD1YER164W ADI1Q03677 179 aa3.83□□□□□ -1.8
CHD1YER164W COQ9Q05779 260 aa3.83□□□□□ -1.8
CHD1YER164W IES4Q08561 116 aa3.83□□□□□ -1.8
CHD1YER164W CDC53Q12018 815 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W PCK1P10963 549 aa3.83□□□□□ -1.8
CHD1YER164W GAL2P13181 574 aa3.83□□□□□ -1.8
CHD1YER164W KSS1P14681 368 aa3.83□□□□□ -1.8
CHD1YER164W VPS29P38759 282 aa3.83□□□□□ -1.8
CHD1YER164W YMR134WP40207 237 aa3.83□□□□□ -1.8
CHD1YER164W MSS2P40990 351 aa3.83□□□□□ -1.8
CHD1YER164W ARF3P40994 183 aaRIP-Chip data3.83□□□□□ -1.8not detected
CHD1YER164W STB1P42845 420 aa3.83□□□□□ -1.8
CHD1YER164W LIA1P47120 325 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W NUT1P53114 1132 aa3.83□□□□□ -1.8
CHD1YER164W NOG2P53742 486 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W RPA49Q01080 415 aaPredicted RBP3.83□□□□□ -1.8
CHD1YER164W ELP3Q02908 557 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W TRS130Q03660 1102 aa3.83□□□□□ -1.8
CHD1YER164W DIA2Q08496 732 aaPredicted RBP3.83□□□□□ -1.8
CHD1YER164W FEX1Q08913 375 aa3.83□□□□□ -1.8
CHD1YER164W YLL058WQ12198 575 aa3.83□□□□□ -1.8
CHD1YER164W MF(ALPHA)1P01149 165 aa3.83□□□□□ -1.8
CHD1YER164W TIF1P10081 395 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W PHO8P11491 566 aa3.83□□□□□ -1.8
CHD1YER164W FBA1P14540 359 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W NMT1P14743 455 aa3.83□□□□□ -1.8
CHD1YER164W CBF1P17106 351 aa3.83□□□□□ -1.8
CHD1YER164W CDC42P19073 191 aa3.83□□□□□ -1.8
CHD1YER164W PUF4P25339 888 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
CHD1YER164W PET112P33893 541 aa3.83□□□□□ -1.8
CHD1YER164W SER3P40054 469 aa3.83□□□□□ -1.8
CHD1YER164W ASG1P40467 964 aa3.83□□□□□ -1.8
CHD1YER164W INP51P40559 946 aaKnown RBP3.83□□□□□ -1.8
CHD1YER164W RTA1P53047 317 aa3.83□□□□□ -1.8
CHD1YER164W YGR111WP53265 400 aa3.83□□□□□ -1.8
CHD1YER164W IPI3P53877 555 aa3.83□□□□□ -1.8
CHD1YER164W INA17Q02888 182 aa3.83□□□□□ -1.8
CHD1YER164W JIP4Q03361 876 aa3.83□□□□□ -1.8
CHD1YER164W ZEO1Q08245 113 aa3.83□□□□□ -1.8
CHD1YER164W CFT2Q12102 859 aaPredicted RBP3.83□□□□□ -1.8
CHD1YER164W RAD10P06838 210 aa3.82□□□□□ -1.8
CHD1YER164W ITR2P30606 609 aa3.82□□□□□ -1.8
CHD1YER164W EUG1P32474 517 aa3.82□□□□□ -1.8
CHD1YER164W PEP12P32854 288 aa3.82□□□□□ -1.8
CHD1YER164W PCS60P38137 543 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
CHD1YER164W SLM4P38247 162 aa3.82□□□□□ -1.8
CHD1YER164W KSP1P38691 1029 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W RCY1P39531 840 aa3.82□□□□□ -1.8
CHD1YER164W RIC1P40395 1056 aa3.82□□□□□ -1.8
CHD1YER164W DPH1P40487 425 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W YIL089WP40500 205 aa3.82□□□□□ -1.8
CHD1YER164W UPF3P48412 387 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W RFX1P48743 811 aa3.82□□□□□ -1.8
CHD1YER164W DRN1P53255 507 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W DCP2P53550 970 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W ROD1Q02805 837 aa3.82□□□□□ -1.8
CHD1YER164W NSE1Q07913 336 aa3.82□□□□□ -1.8
CHD1YER164W SGT1Q08446 395 aa3.82□□□□□ -1.8
CHD1YER164W UBA1P22515 1024 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W SPS22P25380 463 aa3.82□□□□□ -1.8
CHD1YER164W CMK1P27466 446 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W WHI3P34761 661 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W SPC34P36131 295 aa3.82□□□□□ -1.8
CHD1YER164W FTR1P40088 404 aa3.82□□□□□ -1.8
CHD1YER164W SMX2P40204 77 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W HAM1P47119 197 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W TOM22P49334 152 aa3.82□□□□□ -1.8
CHD1YER164W CDD1Q06549 142 aa3.82□□□□□ -1.8
CHD1YER164W RPN8Q08723 338 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W MSC6Q08818 692 aaKnown RBP3.82□□□□□ -1.8
CHD1YER164W RIB2Q12362 591 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms