RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C TVP15Q03860 143 aa12.25□□□□□ -0.45
SCC4YER147C TYW1Q08960 810 aaKnown RBP12.25□□□□□ -0.45
SCC4YER147C RUP1Q12242 671 aa12.25□□□□□ -0.45
SCC4YER147C ADE4P04046 510 aaKnown RBP12.25□□□□□ -0.45
SCC4YER147C GID7P25569 745 aa12.25□□□□□ -0.45
SCC4YER147C LRE1P25579 583 aaKnown RBP12.25□□□□□ -0.45
SCC4YER147C FRE1P32791 686 aa12.25□□□□□ -0.45
SCC4YER147C HES1P35843 434 aa12.25□□□□□ -0.45
SCC4YER147C TGL4P36165 910 aa12.25□□□□□ -0.45
SCC4YER147C STL1P39932 569 aa12.25□□□□□ -0.45
SCC4YER147C PFD1P46988 109 aa12.25□□□□□ -0.45
SCC4YER147C IML2P47031 731 aa12.25□□□□□ -0.45
SCC4YER147C UTP8P53276 713 aaKnown RBP12.25□□□□□ -0.45
SCC4YER147C NOP13P53883 403 aaKnown RBP RIP-Chip data12.25□□□□□ -0.45not detected
SCC4YER147C MUB1Q03162 620 aa12.25□□□□□ -0.45
SCC4YER147C HMO1Q03973 246 aaKnown RBP12.25□□□□□ -0.45
SCC4YER147C YPR202WQ08993 238 aa12.25□□□□□ -0.45
SCC4YER147C STB3Q12427 513 aa12.25□□□□□ -0.45
SCC4YER147C RRP36Q12481 300 aaPredicted RBP12.25□□□□□ -0.45
SCC4YER147C MSD1P15179 658 aaKnown RBP12.24□□□□□ -0.45
SCC4YER147C PYC2P32327 1180 aaKnown RBP12.24□□□□□ -0.45
SCC4YER147C MSS51P32335 436 aa12.24□□□□□ -0.45
SCC4YER147C PHO89P38361 574 aa12.24□□□□□ -0.45
SCC4YER147C RRT5P43607 289 aa12.24□□□□□ -0.45
SCC4YER147C SLG1P54867 378 aa12.24□□□□□ -0.45
SCC4YER147C RNY1Q02933 434 aaKnown RBP12.24□□□□□ -0.45
SCC4YER147C MSC2Q03455 724 aa12.24□□□□□ -0.45
SCC4YER147C ATG11Q12527 1178 aa12.24□□□□□ -0.45
SCC4YER147C RTP1Q12751 981 aa12.24□□□□□ -0.45
SCC4YER147C RGS2Q99188 309 aa12.24□□□□□ -0.45
SCC4YER147C ECM29P38737 1868 aa12.24□□□□□ -0.45
SCC4YER147C CTP1P38152 299 aa12.23□□□□□ -0.45
SCC4YER147C SEC27P41811 889 aaKnown RBP12.23□□□□□ -0.45
SCC4YER147C YDR476CQ03362 224 aa12.23□□□□□ -0.45
SCC4YER147C MEU1Q07938 337 aaKnown RBP RIP-Chip data12.23□□□□□ -0.45not detected
SCC4YER147C NRT1Q08485 598 aa12.23□□□□□ -0.45
SCC4YER147C SNX3Q08826 162 aaKnown RBP12.23□□□□□ -0.45
SCC4YER147C YEL077CQ3E7X8 1277 aa12.23□□□□□ -0.45
SCC4YER147C MPH2P0CD99 609 aa12.23□□□□□ -0.45
SCC4YER147C FMP33P46998 180 aa12.23□□□□□ -0.45
SCC4YER147C SLU7Q02775 382 aaKnown RBP12.23□□□□□ -0.45
SCC4YER147C TAF11Q04226 346 aa12.23□□□□□ -0.45
SCC4YER147C BCP1Q06338 283 aa12.23□□□□□ -0.45
SCC4YER147C ZUO1P32527 433 aaKnown RBP12.22□□□□□ -0.45
SCC4YER147C UTR2P32623 467 aa12.22□□□□□ -0.45
SCC4YER147C RDH54P38086 958 aa12.22□□□□□ -0.45
SCC4YER147C LAM5P43560 674 aa12.22□□□□□ -0.45
SCC4YER147C YGR127WP53275 312 aa12.22□□□□□ -0.45
SCC4YER147C YNL058CP53947 316 aa12.22□□□□□ -0.45
SCC4YER147C TMA46Q12000 345 aaKnown RBP12.22□□□□□ -0.45
SCC4YER147C HOS1Q12214 470 aa12.22□□□□□ -0.45
SCC4YER147C PRP6P19735 899 aaPredicted RBP12.21□□□□□ -0.45
SCC4YER147C ADE2P21264 571 aaKnown RBP12.21□□□□□ -0.45
SCC4YER147C AFT1P22149 690 aa12.21□□□□□ -0.45
SCC4YER147C HRR25P29295 494 aaKnown RBP12.21□□□□□ -0.45
SCC4YER147C PEX5P35056 612 aa12.21□□□□□ -0.45
SCC4YER147C KDX1P36005 433 aa12.21□□□□□ -0.45
SCC4YER147C OTU2P38747 307 aaKnown RBP12.21□□□□□ -0.45
SCC4YER147C CRP1P38845 465 aaKnown RBP12.21□□□□□ -0.45
SCC4YER147C RPM2Q02773 1202 aa12.21□□□□□ -0.45
SCC4YER147C CBC2Q08920 208 aaKnown RBP RIP-Chip data12.21□□□□□ -0.45not detected
SCC4YER147C NKP1Q12493 238 aa12.21□□□□□ -0.45
SCC4YER147C PHA2P32452 334 aa12.21□□□□□ -0.46
SCC4YER147C AST1P35183 429 aa12.21□□□□□ -0.46
SCC4YER147C MXR1P40029 184 aa12.21□□□□□ -0.46
SCC4YER147C DIM1P41819 318 aaKnown RBP12.21□□□□□ -0.46
SCC4YER147C MNN11P46985 422 aaKnown RBP12.21□□□□□ -0.46
SCC4YER147C PEX31P53203 462 aa12.21□□□□□ -0.46
SCC4YER147C IST1P53843 298 aaPredicted RBP12.21□□□□□ -0.46
SCC4YER147C VPS9P54787 451 aa12.21□□□□□ -0.46
SCC4YER147C PMI40P29952 429 aaKnown RBP12.2□□□□□ -0.46
SCC4YER147C SPR1P32603 445 aa12.2□□□□□ -0.46
SCC4YER147C CBF5P33322 483 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46not detected
SCC4YER147C BIT2P38346 545 aa12.2□□□□□ -0.46
SCC4YER147C RRN7P40992 514 aa12.2□□□□□ -0.46
SCC4YER147C MAF1P41910 395 aa12.2□□□□□ -0.46
SCC4YER147C CCT8P47079 568 aaKnown RBP12.2□□□□□ -0.46
SCC4YER147C STB4P50104 949 aa12.2□□□□□ -0.46
SCC4YER147C NUP84P52891 726 aa12.2□□□□□ -0.46
SCC4YER147C INA17Q02888 182 aa12.2□□□□□ -0.46
SCC4YER147C SKY1Q03656 742 aa12.2□□□□□ -0.46
SCC4YER147C TIF35Q04067 274 aaKnown RBP12.2□□□□□ -0.46
SCC4YER147C PEX15Q08215 383 aa12.2□□□□□ -0.46
SCC4YER147C MET7Q08645 548 aa12.2□□□□□ -0.46
SCC4YER147C YIG1Q08956 461 aa12.2□□□□□ -0.46
SCC4YER147C PAB1P04147 577 aaKnown RBP RIP-Chip data12.19□□□□□ -0.46not detected
SCC4YER147C GCY1P14065 312 aaKnown RBP RIP-Chip data12.19□□□□□ -0.46not detected
SCC4YER147C YAK1P14680 807 aa12.19□□□□□ -0.46
SCC4YER147C PDC5P16467 563 aaKnown RBP12.19□□□□□ -0.46
SCC4YER147C HSP60P19882 572 aaKnown RBP12.19□□□□□ -0.46
SCC4YER147C GFD2P25370 566 aaKnown RBP12.19□□□□□ -0.46
SCC4YER147C YCL068CP25593 260 aa12.19□□□□□ -0.46
SCC4YER147C GAC1P28006 793 aa12.19□□□□□ -0.46
SCC4YER147C RIM1P32445 135 aaKnown RBP12.19□□□□□ -0.46
SCC4YER147C ASH1P34233 588 aa12.19□□□□□ -0.46
SCC4YER147C GPT2P36148 743 aa12.19□□□□□ -0.46
SCC4YER147C YAT2P40017 923 aa12.19□□□□□ -0.46
SCC4YER147C SPR3P41901 512 aa12.19□□□□□ -0.46
SCC4YER147C ULP1Q02724 621 aa12.19□□□□□ -0.46
SCC4YER147C YKU80Q04437 629 aa12.19□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms