RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C FRT2P39734 528 aa2.33□□□□□ -2.04
SSD1YDR293C IES1P43579 692 aa2.33□□□□□ -2.04
SSD1YDR293C MIC19P43594 170 aa2.33□□□□□ -2.04
SSD1YDR293C INP52P50942 1183 aa2.33□□□□□ -2.04
SSD1YDR293C COG6P53959 839 aa2.33□□□□□ -2.04
SSD1YDR293C UBX4P54730 416 aa2.33□□□□□ -2.04
SSD1YDR293C ORC4P54791 529 aa2.33□□□□□ -2.04
SSD1YDR293C SHE9Q04172 456 aa2.33□□□□□ -2.04
SSD1YDR293C YMR027WQ04371 470 aa2.33□□□□□ -2.04
SSD1YDR293C PRM6Q04705 352 aa2.33□□□□□ -2.04
SSD1YDR293C PUS1Q12211 544 aaKnown RBP2.33□□□□□ -2.04
SSD1YDR293C Q0142Q9ZZW4 58 aa2.33□□□□□ -2.04
SSD1YDR293C ILV1P00927 576 aaKnown RBP2.33□□□□□ -2.04
SSD1YDR293C EFT1P32324 842 aaKnown RBP2.33□□□□□ -2.04
SSD1YDR293C VPH2P32341 215 aa2.33□□□□□ -2.04
SSD1YDR293C MRX3P38172 270 aa2.33□□□□□ -2.04
SSD1YDR293C KSP1P38691 1029 aaKnown RBP2.33□□□□□ -2.04
SSD1YDR293C SMF1P38925 575 aa2.33□□□□□ -2.04
SSD1YDR293C YFL054CP43549 646 aa2.33□□□□□ -2.04
SSD1YDR293C URB2P47108 1174 aa2.33□□□□□ -2.04
SSD1YDR293C YGR117CP53270 476 aa2.33□□□□□ -2.04
SSD1YDR293C COP1P53622 1201 aaKnown RBP2.33□□□□□ -2.04
SSD1YDR293C GTR1Q00582 310 aa2.33□□□□□ -2.04
SSD1YDR293C SOV1Q04748 898 aa2.33□□□□□ -2.04
SSD1YDR293C IWR1Q07532 353 aaPredicted RBP2.33□□□□□ -2.04
SSD1YDR293C YOL019WQ08157 551 aa2.33□□□□□ -2.04
SSD1YDR293C GAS5Q08193 484 aa2.33□□□□□ -2.04
SSD1YDR293C TMA46Q12000 345 aaKnown RBP2.33□□□□□ -2.04
SSD1YDR293C HRT3Q12347 344 aa2.33□□□□□ -2.04
SSD1YDR293C JIP3O13555 125 aa2.32□□□□□ -2.04
SSD1YDR293C RAD1P06777 1100 aa2.32□□□□□ -2.04
SSD1YDR293C EST1P17214 699 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C ADE2P21264 571 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C SEC1P30619 724 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C SMI1P32566 505 aa2.32□□□□□ -2.04
SSD1YDR293C TGL1P34163 548 aa2.32□□□□□ -2.04
SSD1YDR293C OAF3P36023 863 aa2.32□□□□□ -2.04
SSD1YDR293C MCR1P36060 302 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C PET10P36139 283 aa2.32□□□□□ -2.04
SSD1YDR293C HIS2P38635 335 aa2.32□□□□□ -2.04
SSD1YDR293C APM2P38700 605 aa2.32□□□□□ -2.04
SSD1YDR293C CCT2P39076 527 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C YIL001WP40560 513 aa2.32□□□□□ -2.04
SSD1YDR293C SHR5P41912 237 aa2.32□□□□□ -2.04
SSD1YDR293C PFD1P46988 109 aa2.32□□□□□ -2.04
SSD1YDR293C YGL140CP53120 1219 aa2.32□□□□□ -2.04
SSD1YDR293C GUP1P53154 560 aa2.32□□□□□ -2.04
SSD1YDR293C SOK2P53438 785 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C HST3P53687 447 aa2.32□□□□□ -2.04
SSD1YDR293C CPR6P53691 371 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C DAK1P54838 584 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C MMT1Q03218 510 aa2.32□□□□□ -2.04
SSD1YDR293C GIS4Q04233 774 aa2.32□□□□□ -2.04
SSD1YDR293C CSR2Q12734 1121 aa2.32□□□□□ -2.04
SSD1YDR293C FLO1P32768 1537 aa2.32□□□□□ -2.04
SSD1YDR293C CHO2P05374 869 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C HSC82P15108 705 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C KGD2P19262 463 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C FAR1P21268 830 aa2.32□□□□□ -2.04
SSD1YDR293C RGT1P32862 1170 aa2.32□□□□□ -2.04
SSD1YDR293C BEM3P32873 1128 aa2.32□□□□□ -2.04
SSD1YDR293C TYE7P33122 291 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C CSG2P35206 410 aa2.32□□□□□ -2.04
SSD1YDR293C PPS1P38148 807 aa2.32□□□□□ -2.04
SSD1YDR293C HSM3P38348 480 aa2.32□□□□□ -2.04
SSD1YDR293C MSR1P38714 643 aa2.32□□□□□ -2.04
SSD1YDR293C YHL041WP38730 149 aa2.32□□□□□ -2.04
SSD1YDR293C LYS9P38999 446 aa2.32□□□□□ -2.04
SSD1YDR293C ACA1P39970 489 aa2.32□□□□□ -2.04
SSD1YDR293C YEL068CP39977 110 aa2.32□□□□□ -2.04
SSD1YDR293C SEC26P41810 973 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C CIT3P43635 486 aa2.32□□□□□ -2.04
SSD1YDR293C YJR054WP47114 497 aa2.32□□□□□ -2.04
SSD1YDR293C MTR3P48240 250 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C NBP1P52919 319 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C YPR003CP53394 754 aa2.32□□□□□ -2.04
SSD1YDR293C PGA2P53903 129 aa2.32□□□□□ -2.04
SSD1YDR293C RSC4Q02206 625 aa2.32□□□□□ -2.04
SSD1YDR293C RPM2Q02773 1202 aa2.32□□□□□ -2.04
SSD1YDR293C HEH2Q03281 663 aa2.32□□□□□ -2.04
SSD1YDR293C TAF11Q04226 346 aa2.32□□□□□ -2.04
SSD1YDR293C TDA9Q04545 1251 aa2.32□□□□□ -2.04
SSD1YDR293C YDR109CQ04585 715 aa2.32□□□□□ -2.04
SSD1YDR293C HEL2Q05580 639 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C SSQ1Q05931 657 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C KAP95Q06142 861 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C YPL066WQ12194 479 aa2.32□□□□□ -2.04
SSD1YDR293C ARP6Q12509 438 aa2.32□□□□□ -2.04
SSD1YDR293C MRP10O75012 95 aa2.32□□□□□ -2.04
SSD1YDR293C TUB2P02557 457 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C HEM1P09950 548 aaPredicted RBP2.32□□□□□ -2.04
SSD1YDR293C IMA3P0CW40 589 aa2.32□□□□□ -2.04
SSD1YDR293C IMA4P0CW41 589 aa2.32□□□□□ -2.04
SSD1YDR293C PMR1P13586 950 aa2.32□□□□□ -2.04
SSD1YDR293C EXO70P19658 623 aa2.32□□□□□ -2.04
SSD1YDR293C PRP9P19736 530 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C AMD2P22580 549 aa2.32□□□□□ -2.04
SSD1YDR293C SYP1P25623 870 aaKnown RBP2.32□□□□□ -2.04
SSD1YDR293C BUD14P27637 709 aa2.32□□□□□ -2.04
SSD1YDR293C SIN4P32259 974 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 99.6 ms