RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	AIM44	Q99299	758 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	YMR085W	P0CF18	432 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	YJU2	P28320	278 aa	Predicted RBP	2.4	□□□□□ -2.03
CSN9	YDR179C	DSS4	P32601	143 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	PPG1	P32838	368 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	GCS1	P35197	352 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	OAF1	P39720	1047 aa	Predicted RBP	2.4	□□□□□ -2.03
CSN9	YDR179C	PMT3	P47190	753 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	ALG12	P53730	551 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	MTQ2	Q03920	221 aa	Predicted RBP	2.4	□□□□□ -2.03
CSN9	YDR179C	THI73	Q07904	523 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	SRL1	Q08673	210 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	PCL8	Q08966	492 aa		2.4	□□□□□ -2.03
CSN9	YDR179C	ILS1	P09436	1072 aa	Known RBP	2.39	□□□□□ -2.03
CSN9	YDR179C	YER190C-B	P0CX94	160 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	YEL077W-A	P0CX95	160 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	YGR296C-B	P0CX96	160 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	YPL283W-B	P0CX97	160 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	YPR204C-A	P0CX98	160 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	PCK1	P10963	549 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	YPK1	P12688	680 aa	Known RBP	2.39	□□□□□ -2.03
CSN9	YDR179C	CDC26	P14724	124 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	CDC5	P32562	705 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	ATO2	P32907	282 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	SRP68	P38687	599 aa	Known RBP	2.39	□□□□□ -2.03
CSN9	YDR179C	TOM71	P38825	639 aa	Known RBP	2.39	□□□□□ -2.03
CSN9	YDR179C	RNR4	P49723	345 aa	Known RBP	2.39	□□□□□ -2.03
CSN9	YDR179C	BOP3	P53958	396 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	CYK3	Q07533	885 aa		2.39	□□□□□ -2.03
CSN9	YDR179C	PNO1	Q99216	274 aa	Known RBP	2.39	□□□□□ -2.03
CSN9	YDR179C	YEL076C-A	P0CX16	216 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	YLR464W	P0CX17	216 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	AIM17	P23180	465 aa	Known RBP	2.38	□□□□□ -2.03
CSN9	YDR179C	CWH43	P25618	953 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	FTH1	P38310	465 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	SDH8	P38345	138 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	MTG2	P38860	518 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	MNN1	P39106	762 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	YEL076C	P39971	216 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	MAM1	P40065	302 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	YIR016W	P40572	265 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	NOP2	P40991	618 aa	Known RBP	2.38	□□□□□ -2.03
CSN9	YDR179C	MDV1	P47025	714 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	MDR1	P53258	950 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	COG2	P53271	262 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	AAT1	Q01802	451 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	GRS2	Q06817	618 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	UBX3	Q12229	455 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	VPS5	Q92331	675 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	ADR1	P07248	1323 aa		2.38	□□□□□ -2.03
CSN9	YDR179C	YCP4	P25349	247 aa	Known RBP	2.37	□□□□□ -2.03
CSN9	YDR179C	RMA1	P36001	430 aa	Known RBP	2.37	□□□□□ -2.03
CSN9	YDR179C	FAT1	P38225	669 aa		2.37	□□□□□ -2.03
CSN9	YDR179C	RPL15B	P54780	204 aa	Predicted RBP	2.37	□□□□□ -2.03
CSN9	YDR179C	UME1	Q03010	460 aa		2.37	□□□□□ -2.03
CSN9	YDR179C	RAD33	Q04231	177 aa		2.37	□□□□□ -2.03
CSN9	YDR179C	SNA4	Q07549	140 aa		2.37	□□□□□ -2.03
CSN9	YDR179C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
CSN9	YDR179C	ATX2	Q12067	313 aa		2.37	□□□□□ -2.03
CSN9	YDR179C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
CSN9	YDR179C	CHO2	P05374	869 aa	Known RBP	2.36	□□□□□ -2.03
CSN9	YDR179C	PLC1	P32383	869 aa		2.36	□□□□□ -2.03
CSN9	YDR179C	RTT107	P38850	1070 aa		2.36	□□□□□ -2.03
CSN9	YDR179C	PEA2	P40091	420 aa		2.36	□□□□□ -2.03
CSN9	YDR179C	MAF1	P41910	395 aa		2.36	□□□□□ -2.03
CSN9	YDR179C	RNH70	P53331	553 aa		2.36	□□□□□ -2.03
CSN9	YDR179C	DNM1	P54861	757 aa		2.36	□□□□□ -2.03
CSN9	YDR179C	SNU56	Q03782	492 aa	Known RBP	2.36	□□□□□ -2.03
CSN9	YDR179C	NUP145	P49687	1317 aa		2.36	□□□□□ -2.03
CSN9	YDR179C	RPS21A	P0C0V8	87 aa	Known RBP	2.35	□□□□□ -2.03
CSN9	YDR179C	MAK32	P23060	363 aa		2.35	□□□□□ -2.03
CSN9	YDR179C	HXT4	P32467	576 aa		2.35	□□□□□ -2.03
CSN9	YDR179C	RPT3	P33298	428 aa	Known RBP	2.35	□□□□□ -2.03
CSN9	YDR179C	KES1	P35844	434 aa	Known RBP	2.35	□□□□□ -2.03
CSN9	YDR179C	SCO2	P38072	301 aa		2.35	□□□□□ -2.03
CSN9	YDR179C	NMD2	P38798	1089 aa	Known RBP	2.35	□□□□□ -2.03
CSN9	YDR179C	FLO5	P38894	1075 aa		2.35	□□□□□ -2.03
CSN9	YDR179C	LYS20	P48570	428 aa	Known RBP	2.35	□□□□□ -2.03
CSN9	YDR179C	YLR281C	Q05863	155 aa		2.35	□□□□□ -2.03
CSN9	YDR179C	NGL1	Q08213	363 aa	Known RBP	2.35	□□□□□ -2.03
CSN9	YDR179C	DSE3	Q08729	430 aa		2.35	□□□□□ -2.03
CSN9	YDR179C	GET3	Q12154	354 aa	Known RBP	2.35	□□□□□ -2.03
CSN9	YDR179C	KGD2	P19262	463 aa	Predicted RBP	2.34	□□□□□ -2.03
CSN9	YDR179C	GDA1	P32621	518 aa		2.34	□□□□□ -2.03
CSN9	YDR179C	LNP1	P38878	278 aa		2.34	□□□□□ -2.03
CSN9	YDR179C	CIN1	P40987	1014 aa		2.34	□□□□□ -2.03
CSN9	YDR179C	YNL092W	P53934	400 aa		2.34	□□□□□ -2.03
CSN9	YDR179C	SKY1	Q03656	742 aa		2.34	□□□□□ -2.03
CSN9	YDR179C	YOR389W	Q08912	624 aa		2.34	□□□□□ -2.03
CSN9	YDR179C	FAP7	Q12055	197 aa	Predicted RBP	2.34	□□□□□ -2.03
CSN9	YDR179C	YPT1	P01123	206 aa	Known RBP	2.33	□□□□□ -2.04
CSN9	YDR179C	SWC3	P31376	625 aa		2.33	□□□□□ -2.04
CSN9	YDR179C	SSP120	P39931	234 aa	Known RBP	2.33	□□□□□ -2.04
CSN9	YDR179C	IRC5	P43610	853 aa		2.33	□□□□□ -2.04
CSN9	YDR179C	PLM2	Q04383	521 aa		2.33	□□□□□ -2.04
CSN9	YDR179C	NDD1	Q08887	554 aa		2.33	□□□□□ -2.04
CSN9	YDR179C	YPR027C	Q12079	277 aa		2.33	□□□□□ -2.04
CSN9	YDR179C	LYS21	Q12122	440 aa	Known RBP	2.33	□□□□□ -2.04
CSN9	YDR179C	HOS1	Q12214	470 aa		2.33	□□□□□ -2.04
CSN9	YDR179C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.33	□□□□□ -2.04	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms