RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A MUP3P38734 546 aa3.88□□□□□ -1.79
YDR170W-AYDR170W-A PIH1P38768 344 aa3.88□□□□□ -1.79
YDR170W-AYDR170W-A PMC1P38929 1173 aaPredicted RBP3.88□□□□□ -1.79
YDR170W-AYDR170W-A YIL166CP40445 542 aa3.88□□□□□ -1.79
YDR170W-AYDR170W-A HIM1Q06674 414 aa3.88□□□□□ -1.79
YDR170W-AYDR170W-A TPK2P06245 380 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A BET2P20133 325 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A CCL1P37366 393 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A YHL041WP38730 149 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A YLF2P38746 405 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A YEL020CP39994 560 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A ASN1P49089 572 aaKnown RBP3.87□□□□□ -1.79
YDR170W-AYDR170W-A COS12P53053 380 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A MOT3P54785 490 aaKnown RBP3.87□□□□□ -1.79
YDR170W-AYDR170W-A USA1Q03714 838 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A ENT2Q05785 613 aa3.87□□□□□ -1.79
YDR170W-AYDR170W-A RPN13O13563 156 aa3.86□□□□□ -1.79
YDR170W-AYDR170W-A PIF1P07271 859 aa3.86□□□□□ -1.79
YDR170W-AYDR170W-A VFA1P40080 203 aa3.86□□□□□ -1.79
YDR170W-AYDR170W-A RPS15Q01855 142 aaKnown RBP3.86□□□□□ -1.79
YDR170W-AYDR170W-A YDL073WQ07454 984 aa3.86□□□□□ -1.79
YDR170W-AYDR170W-A BRE1Q07457 700 aaKnown RBP3.86□□□□□ -1.79
YDR170W-AYDR170W-A AAD4Q07747 329 aa3.86□□□□□ -1.79
YDR170W-AYDR170W-A TGS1Q12052 315 aa3.86□□□□□ -1.79
YDR170W-AYDR170W-A ZPS1Q12512 249 aa3.86□□□□□ -1.79
YDR170W-AYDR170W-A SEC18P18759 758 aaKnown RBP3.85□□□□□ -1.79
YDR170W-AYDR170W-A RPA135P22138 1203 aaKnown RBP3.85□□□□□ -1.79
YDR170W-AYDR170W-A SPO11P23179 398 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A PWP2P25635 923 aaKnown RBP3.85□□□□□ -1.79
YDR170W-AYDR170W-A MSH1P25846 959 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A LOT5P34234 306 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A APM3P38153 483 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A POL31P46957 487 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A YGL117WP53133 265 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A UBX4P54730 416 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A APM1Q00776 475 aaPredicted RBP3.85□□□□□ -1.79
YDR170W-AYDR170W-A TRS31Q03337 283 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A CRD1Q07560 283 aa3.85□□□□□ -1.79
YDR170W-AYDR170W-A CTT1P06115 562 aa3.84□□□□□ -1.79
YDR170W-AYDR170W-A YPK1P12688 680 aaKnown RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A PGI1P12709 554 aaKnown RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A VPS34P22543 875 aa3.84□□□□□ -1.79
YDR170W-AYDR170W-A SAT4P25333 603 aaKnown RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A RPS7AP26786 190 aaKnown RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A PRP45P28004 379 aaPredicted RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A VPS24P36095 224 aaKnown RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A YPT10P38146 199 aa3.84□□□□□ -1.79
YDR170W-AYDR170W-A STT3P39007 718 aaKnown RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A VPS27P40343 622 aaKnown RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A STB2P46679 850 aa3.84□□□□□ -1.79
YDR170W-AYDR170W-A IDS2P46958 469 aa3.84□□□□□ -1.79
YDR170W-AYDR170W-A SAP4P53036 818 aa3.84□□□□□ -1.79
YDR170W-AYDR170W-A COQ6P53318 479 aa3.84□□□□□ -1.79
YDR170W-AYDR170W-A CPR8P53728 308 aa3.84□□□□□ -1.79
YDR170W-AYDR170W-A VMS1Q04311 632 aaKnown RBP3.84□□□□□ -1.79
YDR170W-AYDR170W-A CPA2P03965 1118 aaKnown RBP3.83□□□□□ -1.8
YDR170W-AYDR170W-A WHI2P12611 486 aa3.83□□□□□ -1.8
YDR170W-AYDR170W-A PHO81P17442 1178 aa3.83□□□□□ -1.8
YDR170W-AYDR170W-A PRE2P30656 287 aaKnown RBP3.83□□□□□ -1.8
YDR170W-AYDR170W-A UGP1P32861 499 aaKnown RBP3.83□□□□□ -1.8
YDR170W-AYDR170W-A PAP2P53632 584 aaKnown RBP3.83□□□□□ -1.8
YDR170W-AYDR170W-A ADE5,7P07244 802 aaKnown RBP3.82□□□□□ -1.8
YDR170W-AYDR170W-A POL3P15436 1097 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A APA1P16550 321 aaKnown RBP3.82□□□□□ -1.8
YDR170W-AYDR170W-A RNR3P21672 869 aaKnown RBP3.82□□□□□ -1.8
YDR170W-AYDR170W-A SIR1P21691 654 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A MCM3P24279 971 aaKnown RBP3.82□□□□□ -1.8
YDR170W-AYDR170W-A YMC1P32331 307 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A CDC5P32562 705 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A SDH8P38345 138 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A SPC72P39723 622 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A MRK1P50873 501 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A VPS64Q03944 604 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A ARG7Q04728 441 aa3.82□□□□□ -1.8
YDR170W-AYDR170W-A MRN1Q08925 612 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
YDR170W-AYDR170W-A PAC2P39937 518 aa3.81□□□□□ -1.8
YDR170W-AYDR170W-A ACA1P39970 489 aa3.81□□□□□ -1.8
YDR170W-AYDR170W-A ARB1P40024 610 aaKnown RBP3.81□□□□□ -1.8
YDR170W-AYDR170W-A GFD1Q04839 188 aaKnown RBP3.81□□□□□ -1.8
YDR170W-AYDR170W-A IWR1Q07532 353 aaPredicted RBP3.81□□□□□ -1.8
YDR170W-AYDR170W-A ICL2Q12031 575 aa3.81□□□□□ -1.8
YDR170W-AYDR170W-A ULA1Q12059 462 aa3.81□□□□□ -1.8
YDR170W-AYDR170W-A LEU2P04173 364 aaPredicted RBP3.8□□□□□ -1.8
YDR170W-AYDR170W-A AAC1P04710 309 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A RPL7AP05737 244 aaKnown RBP3.8□□□□□ -1.8
YDR170W-AYDR170W-A RIT1P23796 513 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A AAD3P25612 363 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A MRPL9P31334 269 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A FRD1P32614 470 aaKnown RBP3.8□□□□□ -1.8
YDR170W-AYDR170W-A RPT2P40327 437 aaKnown RBP3.8□□□□□ -1.8
YDR170W-AYDR170W-A CAB2P40506 365 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A CPR6P53691 371 aaKnown RBP3.8□□□□□ -1.8
YDR170W-AYDR170W-A FMP30Q02883 468 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A ATG16Q03818 150 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A CRF1Q04930 467 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A EIS1Q05050 843 aaKnown RBP3.8□□□□□ -1.8
YDR170W-AYDR170W-A MRI1Q06489 411 aaKnown RBP3.8□□□□□ -1.8
YDR170W-AYDR170W-A AIM6Q07716 390 aa3.8□□□□□ -1.8
YDR170W-AYDR170W-A RPL7BQ12213 244 aaKnown RBP3.8□□□□□ -1.8
YDR170W-AYDR170W-A ADE3P07245 946 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms