RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ACTR5Q9H9F9 607 aaPredicted RBP16.78■□□□□ 0.28
UBE3A-227ENST00000638011 FAM13AO94988 1023 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 NBPF10Q6P3W6 841 aaKnown RBP16.78■□□□□ 0.28
UBE3A-227ENST00000638011 TRIM42Q8IWZ5 723 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 SECISBP2LQ93073 1101 aaKnown RBP16.78■□□□□ 0.28
UBE3A-227ENST00000638011 MYH11P35749 1972 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 IGSF22Q8N9C0 903 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 KIFC2Q96AC6 838 aa16.78■□□□□ 0.28
UBE3A-227ENST00000638011 RTN1Q16799 776 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 FNBP4Q8N3X1 1017 aaPredicted RBP16.77■□□□□ 0.28
UBE3A-227ENST00000638011 SPOPO43791 374 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 GRK7Q8WTQ7 553 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 CNOT10Q9H9A5 744 aaKnown RBP16.77■□□□□ 0.28
UBE3A-227ENST00000638011 GUCY1B3Q02153 619 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 HAUS1Q96CS2 278 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 KCNA4P22459 653 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 ZNF530Q6P9A1 599 aaPredicted RBP16.77■□□□□ 0.28
UBE3A-227ENST00000638011 PDZD8Q8NEN9 1154 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 TSC22D3Q99576 134 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 BOLA2Q9H3K6 86 aa16.77■□□□□ 0.28
UBE3A-227ENST00000638011 DDX41Q9UJV9 622 aaKnown RBP16.77■□□□□ 0.28
UBE3A-227ENST00000638011 ATP6V1E1P36543 226 aa16.77■□□□□ 0.27
UBE3A-227ENST00000638011 SLC26A6Q9BXS9 759 aa16.77■□□□□ 0.27
UBE3A-227ENST00000638011 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.27
UBE3A-227ENST00000638011 ZNF500O60304 480 aaPredicted RBP16.77■□□□□ 0.27
UBE3A-227ENST00000638011 KRT15P19012 456 aa16.77■□□□□ 0.27
UBE3A-227ENST00000638011 RPS6KA2Q15349 733 aa16.77■□□□□ 0.27
UBE3A-227ENST00000638011 CLTAP09496 248 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 GSTO1P78417 241 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 ALG1Q9BT22 464 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 COPG1Q9Y678 874 aaKnown RBP16.76■□□□□ 0.27
UBE3A-227ENST00000638011 NUMA1Q14980 2115 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 TTC4O95801 387 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 SPDL1Q96EA4 605 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 LLPHQ9BRT6 129 aaKnown RBP16.76■□□□□ 0.27
UBE3A-227ENST00000638011 SAR1BQ9Y6B6 198 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 GNAT2P19087 354 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 ZNF449Q6P9G9 518 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 ST13P4Q8IZP2 240 aaPredicted RBP16.76■□□□□ 0.27
UBE3A-227ENST00000638011 ANGPTL2Q9UKU9 493 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 STK38LQ9Y2H1 464 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.276e-7■□□□□ 8.4
UBE3A-227ENST00000638011 HLA-DOAP06340 250 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 UAP1Q16222 522 aaPredicted RBP16.76■□□□□ 0.27
UBE3A-227ENST00000638011 JRKLQ9Y4A0 524 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 ARHGAP45Q92619 1136 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 MIS12Q9H081 205 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 SH3GL3Q99963 347 aa16.76■□□□□ 0.27
UBE3A-227ENST00000638011 A0A087WUV0 522 aaPredicted RBP16.75■□□□□ 0.27
UBE3A-227ENST00000638011 TRIM37O94972 964 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 MX2P20592 715 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 AFMP43652 599 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 CTAGE3PQ8IX95 158 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 NME8Q8N427 588 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 LDHCP07864 332 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 MRFAP1L1Q96HT8 127 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 SYNRGQ9UMZ2 1314 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 PLCD1P51178 756 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 CCDC117Q8IWD4 279 aaPredicted RBP16.75■□□□□ 0.27
UBE3A-227ENST00000638011 TMCO5AQ8N6Q1 288 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 TMEM232C9JQI7 657 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 CROCCQ5TZA2 2017 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 MYL6BP14649 208 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 CCDC125Q86Z20 511 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 PALMDQ9NP74 551 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 FGFR1OP2Q9NVK5 253 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 GLT8D2Q9H1C3 349 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 PAIP2BQ9ULR5 123 aaKnown RBP16.75■□□□□ 0.27
UBE3A-227ENST00000638011 MAN1A1P33908 653 aa16.75■□□□□ 0.27
UBE3A-227ENST00000638011 CTNNA1P35221 906 aaKnown RBP16.75■□□□□ 0.27
UBE3A-227ENST00000638011 IFIT1BQ5T764 474 aaKnown RBP16.75■□□□□ 0.27
UBE3A-227ENST00000638011 PIK3R4Q99570 1358 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 MYH6P13533 1939 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.74■□□□□ 0.27
UBE3A-227ENST00000638011 ZNF354CQ86Y25 554 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 N4BP2L2Q92802 583 aaPredicted RBP16.74■□□□□ 0.27
UBE3A-227ENST00000638011 EXOC4Q96A65 974 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 HAUS7Q99871 368 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 SPC25Q9HBM1 224 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 PPANQ9NQ55 473 aaKnown RBP16.74■□□□□ 0.27
UBE3A-227ENST00000638011 ARID5AQ03989 594 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 KIF11P52732 1056 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 DTHD1Q6ZMT9 781 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 SSH1Q8WYL5 1049 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 TRIM6Q9C030 488 aaPredicted RBP16.74■□□□□ 0.27
UBE3A-227ENST00000638011 NSD3Q9BZ95 1437 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 SERPINB6P35237 376 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 KRT2P35908 639 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 BCAS4Q8TDM0 211 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 SAAL1Q96ER3 474 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 ZRANB1Q9UGI0 708 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
UBE3A-227ENST00000638011 RABGGTAQ92696 567 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 ASIC3Q9UHC3 531 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 TMED1Q13445 227 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
UBE3A-227ENST00000638011 ANKRD36BQ8N2N9 1353 aa16.73■□□□□ 0.27
UBE3A-227ENST00000638011 EIF3CLB5ME19 914 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms