RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 C7orf43Q8WVR3 580 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 ANKS1AQ92625 1134 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 SHISA4Q96DD7 197 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 FUCA2Q9BTY2 467 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 RTFDC1Q9BY42 306 aaPredicted RBP5.65□□□□□ -1.5
SCN8A-213ENST00000637540 NAPBQ9H115 298 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 CNNM2Q9H8M5 875 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 ATP8A2Q9NTI2 1148 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 RAI14Q9P0K7 980 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 ATP6V0A2Q9Y487 856 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 ATP6V1DQ9Y5K8 247 aa5.65□□□□□ -1.5
SCN8A-213ENST00000637540 FER1L6Q2WGJ9 1857 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 MYH4Q9Y623 1939 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 GPR75-ASB3A0A0A6YYF3 556 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 VPS37CA5D8V6 355 aaPredicted RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 USP17L12C9JPN9 530 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 USP17L21D6R901 530 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 APPP05067 770 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 PCP11498 1178 aaKnown RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 NPR1P16066 1061 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 IFNAR1P17181 557 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 NOVP48745 357 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 MRE11P49959 708 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 FOXD4L6Q3SYB3 417 aaPredicted RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 C12orf60Q5U649 245 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 SPTY2D1Q68D10 685 aaPredicted RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 RCSD1Q6JBY9 416 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 LRSAM1Q6UWE0 723 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 FOXD4L3Q6VB84 417 aaPredicted RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 RBM43Q6ZSC3 357 aaKnown RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 MFSD6Q6ZSS7 791 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 ZNF804AQ7Z570 1209 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 RALYLQ86SE5 291 aaKnown RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 RPGRQ92834 1020 aaKnown RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 CHMP4CQ96CF2 233 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 DDX11Q96FC9 970 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 PANK2Q9BZ23 570 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 NACAP1Q9BZK3 213 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 KRT23Q9C075 422 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 ZSCAN16Q9H4T2 348 aaPredicted RBP5.64□□□□□ -1.51
SCN8A-213ENST00000637540 GRPEL1Q9HAV7 217 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 GJB4Q9NTQ9 266 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 GGA1Q9UJY5 639 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 STK36Q9NRP7 1315 aa5.64□□□□□ -1.51
SCN8A-213ENST00000637540 GOLGA6L3A6NEY3 463 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 GOLGA8BA8MQT2 603 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 KIF28PB7ZC32 967 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 UBE2Q2LH0YL09 131 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 PPEF1O14829 653 aaPredicted RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 UFL1O94874 794 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 MMP10P09238 476 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 CYP2D6P10635 497 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 LIG1P18858 919 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 U2AF2P26368 475 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 TDO2P48775 406 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 KRT85P78386 507 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 TROAPQ12815 778 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 TRDNQ13061 729 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 CHAF1AQ13111 956 aaPredicted RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 DIXDC1Q155Q3 683 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 EZH2Q15910 746 aaKnown RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 SLC15A2Q16348 729 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 TMEM67Q5HYA8 995 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 L1TD1Q5T7N2 865 aaKnown RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 ATL3Q6DD88 541 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 OLFM4Q6UX06 510 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 VPS37DQ86XT2 251 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 RAB11FIP4Q86YS3 637 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 TMTC2Q8N394 836 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 CERS5Q8N5B7 392 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 ENAHQ8N8S7 591 aaPredicted RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 AIFM3Q96NN9 605 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 USP28Q96RU2 1077 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 CRNKL1Q9BZJ0 848 aaKnown RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 RBSNQ9H1K0 784 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 RNF41Q9H4P4 317 aaPredicted RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 AATFQ9NY61 560 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 ANKIB1Q9P2G1 1089 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 TFIP11Q9UBB9 837 aaKnown RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 ORC3Q9UBD5 711 aaPredicted RBP5.63□□□□□ -1.51
SCN8A-213ENST00000637540 MROH7-TTC4A0A0A0MT08 1334 aa5.63□□□□□ -1.51
SCN8A-213ENST00000637540 ARFGEF1Q9Y6D6 1849 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 MINDY4BA8MYZ0 360 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 IFIT3O14879 490 aaKnown RBP5.62□□□□□ -1.51
SCN8A-213ENST00000637540 ZBTB43O43298 467 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 FIBPO43427 364 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 DHX16O60231 1041 aaKnown RBP5.62□□□□□ -1.51
SCN8A-213ENST00000637540 FMNL1O95466 1100 aaPredicted RBP5.62□□□□□ -1.51
SCN8A-213ENST00000637540 LDHBP07195 334 aaKnown RBP5.62□□□□□ -1.51
SCN8A-213ENST00000637540 USP17L8P0C7I0 530 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 RXRAP19793 462 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 ALDH1B1P30837 517 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 GUCY1A2P33402 732 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 PDE6BP35913 854 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 NASPP49321 788 aaPredicted RBP5.62□□□□□ -1.51
SCN8A-213ENST00000637540 NT5C2P49902 561 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 METAP2P50579 478 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCN8A-213ENST00000637540 KIF23Q02241 960 aaPredicted RBP5.62□□□□□ -1.51
SCN8A-213ENST00000637540 NPY5RQ15761 445 aa5.62□□□□□ -1.51
SCN8A-213ENST00000637540 PKN1Q16512 942 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms