RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 TMOD2Q9NZR1 351 aa15.9■□□□□ 0.14
LINC00643-207ENST00000637212 ZNF70Q9UC06 446 aaPredicted RBP15.9■□□□□ 0.14
LINC00643-207ENST00000637212 UTRNP46939 3433 aa15.9■□□□□ 0.14
LINC00643-207ENST00000637212 E7EWF7 191 aa15.89■□□□□ 0.13
LINC00643-207ENST00000637212 DDNO94850 711 aaPredicted RBP15.89■□□□□ 0.13
LINC00643-207ENST00000637212 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
LINC00643-207ENST00000637212 C12orf60Q5U649 245 aa15.89■□□□□ 0.13
LINC00643-207ENST00000637212 TTC6Q86TZ1 520 aa15.89■□□□□ 0.13
LINC00643-207ENST00000637212 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
LINC00643-207ENST00000637212 NEK1Q96PY6 1258 aa15.89■□□□□ 0.13
LINC00643-207ENST00000637212 DHX36Q9H2U1 1008 aaKnown RBP15.89■□□□□ 0.13
LINC00643-207ENST00000637212 PCDHAC2Q9Y5I4 1007 aa15.89■□□□□ 0.13
LINC00643-207ENST00000637212 FLT1P17948 1338 aa15.89■□□□□ 0.13
LINC00643-207ENST00000637212 GLTPD2A6NH11 291 aa15.88■□□□□ 0.13
LINC00643-207ENST00000637212 MINDY4BA8MYZ0 360 aa15.88■□□□□ 0.13
LINC00643-207ENST00000637212 WNT10BO00744 389 aa15.88■□□□□ 0.13
LINC00643-207ENST00000637212 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
LINC00643-207ENST00000637212 FGRP09769 529 aa15.88■□□□□ 0.13
LINC00643-207ENST00000637212 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
LINC00643-207ENST00000637212 AKNAD1Q5T1N1 836 aa15.88■□□□□ 0.13
LINC00643-207ENST00000637212 STAG1Q8WVM7 1258 aa15.88■□□□□ 0.13
LINC00643-207ENST00000637212 CNNM2Q9H8M5 875 aa15.88■□□□□ 0.13
LINC00643-207ENST00000637212 MYH13Q9UKX3 1938 aa15.88■□□□□ 0.13
LINC00643-207ENST00000637212 MAST2Q6P0Q8 1798 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 ANP32AP39687 249 aaKnown RBP15.87■□□□□ 0.13
LINC00643-207ENST00000637212 HAND2P61296 217 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 TRDNQ13061 729 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 ADCK5Q3MIX3 580 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 MFSD6Q6ZSS7 791 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 NCOA7Q8NI08 942 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 JAKMIP1Q96N16 626 aaKnown RBP15.87■□□□□ 0.13
LINC00643-207ENST00000637212 OSBPL5Q9H0X9 879 aaPredicted RBP15.87■□□□□ 0.13
LINC00643-207ENST00000637212 ALDH8A1Q9H2A2 487 aaPredicted RBP15.87■□□□□ 0.13
LINC00643-207ENST00000637212 ZNF287Q9HBT7 754 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 DDX4Q9NQI0 724 aaKnown RBP15.87■□□□□ 0.13
LINC00643-207ENST00000637212 FAM198AQ9UFP1 575 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 CYP46A1Q9Y6A2 500 aa15.87■□□□□ 0.13
LINC00643-207ENST00000637212 SHTN1A0MZ66 631 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 EPS15P42566 896 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 NFIAQ12857 509 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 PICALMQ13492 652 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 KIF4BQ2VIQ3 1234 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 NBPF9Q3BBW0 867 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 RBM26Q5T8P6 1007 aaKnown RBP15.86■□□□□ 0.13
LINC00643-207ENST00000637212 BLOC1S2Q6QNY1 142 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
LINC00643-207ENST00000637212 SAMD7Q7Z3H4 446 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 FAM83AQ86UY5 434 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 FOXP4Q8IVH2 680 aaPredicted RBP15.86■□□□□ 0.13
LINC00643-207ENST00000637212 FAM151AQ8WW52 585 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 SNX21Q969T3 373 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 KRT23Q9C075 422 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 NBPF3Q9H094 633 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 ADARB2Q9NS39 739 aaKnown RBP15.86■□□□□ 0.13
LINC00643-207ENST00000637212 TAF6LQ9Y6J9 622 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 MYH7P12883 1935 aa15.86■□□□□ 0.13
LINC00643-207ENST00000637212 MYO5AQ9Y4I1 1855 aaKnown RBP15.85■□□□□ 0.13
LINC00643-207ENST00000637212 ORC4O43929 436 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 ST18O60284 1047 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 CASTP20810 708 aaKnown RBP15.85■□□□□ 0.13
LINC00643-207ENST00000637212 MCM2P49736 904 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 NEK4P51957 841 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 CTDSPL2Q05D32 466 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 PDE4BQ07343 736 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 TBC1D10BQ4KMP7 808 aaPredicted RBP15.85■□□□□ 0.13
LINC00643-207ENST00000637212 STOX1Q6ZVD7 989 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 TBC1D10CQ8IV04 446 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 PI4KBQ9UBF8 816 aa15.85■□□□□ 0.13
LINC00643-207ENST00000637212 SAP30BPQ9UHR5 308 aaKnown RBP15.85■□□□□ 0.13
LINC00643-207ENST00000637212 PSME4Q14997 1843 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 CCDC88AQ3V6T2 1871 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 CYP2D7A0A087X1C5 515 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 CYP2D6P10635 497 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 RPS6KB1P23443 525 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 TNNI2P48788 182 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 PLCD1P51178 756 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 EXOSC10Q01780 885 aaKnown RBP15.84■□□□□ 0.13
LINC00643-207ENST00000637212 TNFAIP1Q13829 316 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 RALYLQ86SE5 291 aaKnown RBP15.84■□□□□ 0.13
LINC00643-207ENST00000637212 FBXL16Q8N461 479 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 MTA3Q9BTC8 594 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 EHD4Q9H223 541 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 PDRG1Q9NUG6 133 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 WDR19Q8NEZ3 1342 aa15.84■□□□□ 0.13
LINC00643-207ENST00000637212 ZNF646O15015 1829 aaPredicted RBP15.84■□□□□ 0.13
LINC00643-207ENST00000637212 CLRN2A0PK11 232 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 IQCA1LA6NCM1 817 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 EGFRP00533 1210 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 MCM5P33992 734 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 CACNB3P54284 484 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 ANKRD1Q15327 319 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 USP50Q70EL3 339 aaPredicted RBP15.83■□□□□ 0.12
LINC00643-207ENST00000637212 METTL16Q86W50 562 aaKnown RBP15.83■□□□□ 0.12
LINC00643-207ENST00000637212 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 SWAP70Q9UH65 585 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 HACL1Q9UJ83 578 aa15.83■□□□□ 0.12
LINC00643-207ENST00000637212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.83■□□□□ 0.12
LINC00643-207ENST00000637212 TCP10L2B9ZVM9 353 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms