RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 DLGAP5Q15398 846 aa11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 TBC1D10CQ8IV04 446 aa11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 MAPKAPK5Q8IW41 473 aa11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 ZBED3Q96IU2 234 aaPredicted RBP11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 JAKMIP1Q96N16 626 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 IDI2Q9BXS1 227 aa11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 ZSWIM6Q9HCJ5 1215 aa11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 MYOZ2Q9NPC6 264 aa11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 MCM9Q9NXL9 1143 aa11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 MYH1P12882 1939 aa11.39□□□□□ -0.59
CACNA1A-223ENST00000636058 ZC3H4Q9UPT8 1303 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 SHTN1A0MZ66 631 aa11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 CASTP20810 708 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 COL9A3Q14050 684 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 RUFY3Q7L099 469 aa11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 MICALL2Q8IY33 904 aa11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 STAG1Q8WVM7 1258 aa11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 NEK1Q96PY6 1258 aa11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 UPF3BQ9BZI7 483 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 TDRD3Q9H7E2 651 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 DDX4Q9NQI0 724 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 ROBO3Q96MS0 1386 aa11.38□□□□□ -0.59
CACNA1A-223ENST00000636058 CYP2D7A0A087X1C5 515 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 HMGB1P09429 215 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 FGRP09769 529 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 CYP2D6P10635 497 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 CPA1P15085 419 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 NEK4P51957 841 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 CTDSPL2Q05D32 466 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 NFIAQ12857 509 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 PICALMQ13492 652 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 SPDYE2Q495Y8 402 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 AKNAD1Q5T1N1 836 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 C12orf60Q5U649 245 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 BLOC1S2Q6QNY1 142 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 SNX21Q969T3 373 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 TTC14Q96N46 770 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 GPRC5DQ9NZD1 345 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 CNOT7Q9UIV1 285 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 CYP46A1Q9Y6A2 500 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 TACC3Q9Y6A5 838 aa11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 COL2A1P02458 1487 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-223ENST00000636058 NEDD4P46934 1319 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 WNT10BO00744 389 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 ST18O60284 1047 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 DDNO94850 711 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 CD2BP2O95400 341 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 EGFRP00533 1210 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 RPS6KB1P23443 525 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 CACNB3P54284 484 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 EVX2Q03828 476 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 AMOTL1Q8IY63 956 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 MB21D2Q8IYB1 491 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 NCOA7Q8NI08 942 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 CNNM2Q9H8M5 875 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 ZNF70Q9UC06 446 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 FAM198AQ9UFP1 575 aa11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 SAP30BPQ9UHR5 308 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-223ENST00000636058 UTRNP46939 3433 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 H7C1D1 291 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 MYO1BO43795 1136 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 ENTPD3O75355 529 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 PLCD1P51178 756 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 EXOSC10Q01780 885 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 TRDNQ13061 729 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 KIF4BQ2VIQ3 1234 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 FKBP1CQ5VVH2 108 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 RALYLQ86SE5 291 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 TBC1D2Q9BYX2 928 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 INCENPQ9NQS7 918 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 PDRG1Q9NUG6 133 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 TMOD2Q9NZR1 351 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 ATRNL1Q5VV63 1379 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
CACNA1A-223ENST00000636058 CLRN2A0PK11 232 aa11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 ORC4O43929 436 aa11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 NT5C2P49902 561 aa11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 TBC1D10BQ4KMP7 808 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 TTC6Q86TZ1 520 aa11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 ZFPM1Q8IX07 1006 aa11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 KRT23Q9C075 422 aa11.34□□□□□ -0.59
CACNA1A-223ENST00000636058 DHX36Q9H2U1 1008 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms