RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 DISC1Q9NRI5 854 aa7.99□□□□□ -1.13
TCF4-250ENST00000625849 PCOLCE2Q9UKZ9 415 aa7.99□□□□□ -1.13
TCF4-250ENST00000625849 CTNND2Q9UQB3 1225 aa7.99□□□□□ -1.13
TCF4-250ENST00000625849 ZP2Q05996 745 aa7.98□□□□□ -1.13
TCF4-250ENST00000625849 IKZF1Q13422 519 aa7.98□□□□□ -1.13
TCF4-250ENST00000625849 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
TCF4-250ENST00000625849 RAPGEFL1Q9UHV5 662 aa7.98□□□□□ -1.13
TCF4-250ENST00000625849 ZNF862O60290 1169 aa7.97□□□□□ -1.13
TCF4-250ENST00000625849 HCLS1P14317 486 aaPredicted RBP7.97□□□□□ -1.13
TCF4-250ENST00000625849 AFMP43652 599 aa7.97□□□□□ -1.13
TCF4-250ENST00000625849 KIF4BQ2VIQ3 1234 aa7.97□□□□□ -1.13
TCF4-250ENST00000625849 TTLL10Q6ZVT0 673 aa7.97□□□□□ -1.13
TCF4-250ENST00000625849 TOP6BLQ8N6T0 577 aa7.97□□□□□ -1.13
TCF4-250ENST00000625849 EHD4Q9H223 541 aa7.97□□□□□ -1.13
TCF4-250ENST00000625849 CCDC87Q9NVE4 849 aa7.97□□□□□ -1.13
TCF4-250ENST00000625849 GLI1P08151 1106 aa7.96□□□□□ -1.14
TCF4-250ENST00000625849 PTPN12Q05209 780 aaKnown RBP7.96□□□□□ -1.14
TCF4-250ENST00000625849 ECM1Q16610 540 aa7.96□□□□□ -1.14
TCF4-250ENST00000625849 MPZL3Q6UWV2 235 aa7.96□□□□□ -1.14
TCF4-250ENST00000625849 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.14
TCF4-250ENST00000625849 PCDHGC5Q9Y5F6 944 aa7.96□□□□□ -1.14
TCF4-250ENST00000625849 NFIBO00712 420 aa7.95□□□□□ -1.14
TCF4-250ENST00000625849 BUD31P41223 144 aaPredicted RBP7.95□□□□□ -1.14
TCF4-250ENST00000625849 FYB2Q5VWT5 728 aa7.95□□□□□ -1.14
TCF4-250ENST00000625849 PRR23BQ6ZRT6 265 aa7.95□□□□□ -1.14
TCF4-250ENST00000625849 KRT82Q9NSB4 513 aa7.95□□□□□ -1.14
TCF4-250ENST00000625849 C1QTNF9P0C862 333 aa7.94□□□□□ -1.14
TCF4-250ENST00000625849 SF3B2Q13435 895 aaKnown RBP7.94□□□□□ -1.14
TCF4-250ENST00000625849 RPS26P11Q5JNZ5 115 aaPredicted RBP7.94□□□□□ -1.14
TCF4-250ENST00000625849 USPL1Q5W0Q7 1092 aa7.93□□□□□ -1.14
TCF4-250ENST00000625849 KIRREL1Q96J84 757 aa7.93□□□□□ -1.14
TCF4-250ENST00000625849 HEXIM2Q96MH2 286 aaKnown RBP7.93□□□□□ -1.14
TCF4-250ENST00000625849 SSU72Q9NP77 194 aaKnown RBP7.93□□□□□ -1.14
TCF4-250ENST00000625849 GTF2IRD1Q9UHL9 959 aa7.93□□□□□ -1.14
TCF4-250ENST00000625849 NEFMP07197 916 aa7.92□□□□□ -1.14
TCF4-250ENST00000625849 GSTP1P09211 210 aaKnown RBP7.92□□□□□ -1.14
TCF4-250ENST00000625849 SSFA2P28290 1259 aa7.92□□□□□ -1.14
TCF4-250ENST00000625849 ZNF157P51786 506 aaPredicted RBP7.92□□□□□ -1.14
TCF4-250ENST00000625849 SPACA3Q8IXA5 215 aa7.92□□□□□ -1.14
TCF4-250ENST00000625849 ISL2Q96A47 359 aa7.92□□□□□ -1.14
TCF4-250ENST00000625849 IGF2BP3O00425 579 aaKnown RBP eCLIP7.91□□□□□ -1.14
TCF4-250ENST00000625849 KRT1P04264 644 aa7.91□□□□□ -1.14
TCF4-250ENST00000625849 NEFLP07196 543 aa7.91□□□□□ -1.14
TCF4-250ENST00000625849 FKBP4Q02790 459 aaKnown RBP eCLIP7.91□□□□□ -1.14
TCF4-250ENST00000625849 TMEM67Q5HYA8 995 aa7.91□□□□□ -1.14
TCF4-250ENST00000625849 CYFIP1Q7L576 1253 aa7.91□□□□□ -1.14
TCF4-250ENST00000625849 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.91□□□□□ -1.14
TCF4-250ENST00000625849 FBXO15Q8NCQ5 510 aaPredicted RBP7.91□□□□□ -1.14
TCF4-250ENST00000625849 ABCB6Q9NP58 842 aa7.91□□□□□ -1.14
TCF4-250ENST00000625849 NPHS2Q9NP85 383 aa7.91□□□□□ -1.14
TCF4-250ENST00000625849 MTMR7Q9Y216 660 aa7.91□□□□□ -1.14
TCF4-250ENST00000625849 FAM214BQ7L5A3 538 aa7.9□□□□□ -1.14
TCF4-250ENST00000625849 AMIGO3Q86WK7 504 aa7.9□□□□□ -1.14
TCF4-250ENST00000625849 FAAP100Q0VG06 881 aa7.89□□□□□ -1.15
TCF4-250ENST00000625849 PRPF40BQ6NWY9 871 aaKnown RBP7.89□□□□□ -1.15
TCF4-250ENST00000625849 PITPNM2Q9BZ72 1349 aa7.88□□□□□ -1.15
TCF4-250ENST00000625849 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
TCF4-250ENST00000625849 NPIPB6E9PJ23 425 aa7.88□□□□□ -1.15
TCF4-250ENST00000625849 INHBBP09529 407 aa7.88□□□□□ -1.15
TCF4-250ENST00000625849 CLCN7P51798 805 aa7.88□□□□□ -1.15
TCF4-250ENST00000625849 NKPD1Q17RQ9 610 aa7.88□□□□□ -1.15
TCF4-250ENST00000625849 RNF214Q8ND24 703 aa7.87□□□□□ -1.15
TCF4-250ENST00000625849 KCNB2Q92953 911 aa7.87□□□□□ -1.15
TCF4-250ENST00000625849 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
TCF4-250ENST00000625849 NSUN3Q9H649 340 aaKnown RBP7.87□□□□□ -1.15
TCF4-250ENST00000625849 GNAT3A8MTJ3 354 aa7.86□□□□□ -1.15
TCF4-250ENST00000625849 CPNE3O75131 537 aaKnown RBP7.86□□□□□ -1.15
TCF4-250ENST00000625849 ABL1P00519 1130 aa7.86□□□□□ -1.15
TCF4-250ENST00000625849 TMEM253P0C7T8 217 aa7.86□□□□□ -1.15
TCF4-250ENST00000625849 CTSWP56202 376 aa7.86□□□□□ -1.15
TCF4-250ENST00000625849 ERVK-24P63145 666 aa7.86□□□□□ -1.15
TCF4-250ENST00000625849 CARS2Q9HA77 564 aaKnown RBP7.86□□□□□ -1.15
TCF4-250ENST00000625849 PRDM10Q9NQV6 1147 aa7.86□□□□□ -1.15
TCF4-250ENST00000625849 ZC3H12AQ5D1E8 599 aaKnown RBP7.85□□□□□ -1.15
TCF4-250ENST00000625849 PDZD3Q86UT5 571 aa7.85□□□□□ -1.15
TCF4-250ENST00000625849 KRTAP17-1Q9BYP8 105 aa7.85□□□□□ -1.15
TCF4-250ENST00000625849 ANO2Q9NQ90 1003 aa7.85□□□□□ -1.15
TCF4-250ENST00000625849 TRAK1Q9UPV9 953 aa7.85□□□□□ -1.15
TCF4-250ENST00000625849 GDNFP39905 211 aa7.84□□□□□ -1.15
TCF4-250ENST00000625849 PPP2R3AQ06190 1150 aa7.84□□□□□ -1.15
TCF4-250ENST00000625849 ZNF211Q13398 564 aaPredicted RBP7.84□□□□□ -1.15
TCF4-250ENST00000625849 ORC1Q13415 861 aa7.84□□□□□ -1.15
TCF4-250ENST00000625849 KCNA10Q16322 511 aa7.84□□□□□ -1.15
TCF4-250ENST00000625849 CIAPIN1Q6FI81 312 aa7.84□□□□□ -1.15
TCF4-250ENST00000625849 CD320Q9NPF0 282 aa7.84□□□□□ -1.15
TCF4-250ENST00000625849 C19orf73Q9NVV2 129 aa7.84□□□□□ -1.15
TCF4-250ENST00000625849 GPN3Q9UHW5 284 aaPredicted RBP7.84□□□□□ -1.15
TCF4-250ENST00000625849 GADD45BO75293 160 aaPredicted RBP7.83□□□□□ -1.16
TCF4-250ENST00000625849 CCDC97Q96F63 343 aaPredicted RBP7.83□□□□□ -1.16
TCF4-250ENST00000625849 BRPF3Q9ULD4 1205 aa7.83□□□□□ -1.16
TCF4-250ENST00000625849 TCAF2A6NFQ2 919 aa7.82□□□□□ -1.16
TCF4-250ENST00000625849 TMEM88BA6NKF7 163 aa7.82□□□□□ -1.16
TCF4-250ENST00000625849 ATG14Q6ZNE5 492 aa7.82□□□□□ -1.16
TCF4-250ENST00000625849 EPB41L4BQ9H329 900 aa7.82□□□□□ -1.16
TCF4-250ENST00000625849 TMEM39AQ9NV64 488 aa7.82□□□□□ -1.16
TCF4-250ENST00000625849 MED14OSP0DP75 135 aa7.81□□□□□ -1.16
TCF4-250ENST00000625849 NPAS4Q8IUM7 802 aa7.81□□□□□ -1.16
TCF4-250ENST00000625849 SULF2Q8IWU5 870 aa7.81□□□□□ -1.16
TCF4-250ENST00000625849 CCDC74AQ96AQ1 378 aa7.81□□□□□ -1.16
TCF4-250ENST00000625849 FOXQ1Q9C009 403 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms