RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 AEBP2Q6ZN18 517 aaPredicted RBP32.01■■■□□ 2.71
TCF4-250ENST00000625849 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
TCF4-250ENST00000625849 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
TCF4-250ENST00000625849 PHF23Q9BUL5 403 aaPredicted RBP26.98■■□□□ 1.91
TCF4-250ENST00000625849 FOXD1Q16676 465 aa25.55■■□□□ 1.68
TCF4-250ENST00000625849 MSH5O43196 834 aa24.08■■□□□ 1.45
TCF4-250ENST00000625849 POTEDQ86YR6 584 aa24■■□□□ 1.43
TCF4-250ENST00000625849 PLPPR3Q6T4P5 718 aa23.95■■□□□ 1.42
TCF4-250ENST00000625849 PIAS4Q8N2W9 510 aaPredicted RBP23.83■■□□□ 1.41
TCF4-250ENST00000625849 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
TCF4-250ENST00000625849 ADRA2BP18089 450 aa23.55■■□□□ 1.36
TCF4-250ENST00000625849 MAPK8IP2Q13387 824 aaPredicted RBP21.71■■□□□ 1.07
TCF4-250ENST00000625849 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
TCF4-250ENST00000625849 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
TCF4-250ENST00000625849 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
TCF4-250ENST00000625849 CACNB1Q02641 598 aaPredicted RBP20.84■□□□□ 0.93
TCF4-250ENST00000625849 DCAF8L1A6NGE4 600 aa20.83■□□□□ 0.93
TCF4-250ENST00000625849 HOXD11P31277 338 aaPredicted RBP20.75■□□□□ 0.91
TCF4-250ENST00000625849 CNKSR2Q8WXI2 1034 aa20.63■□□□□ 0.89
TCF4-250ENST00000625849 RNF216Q9NWF9 866 aaPredicted RBP20.52■□□□□ 0.88
TCF4-250ENST00000625849 RNF39Q9H2S5 420 aa20.48■□□□□ 0.87
TCF4-250ENST00000625849 C1QBPQ07021 282 aaKnown RBP20.19■□□□□ 0.82
TCF4-250ENST00000625849 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
TCF4-250ENST00000625849 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
TCF4-250ENST00000625849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.79■□□□□ 0.76
TCF4-250ENST00000625849 NPM3O75607 178 aaKnown RBP19.74■□□□□ 0.75
TCF4-250ENST00000625849 U3KPZ7 1027 aaPredicted RBP19.32■□□□□ 0.68
TCF4-250ENST00000625849 CAPN15O75808 1086 aa19.14■□□□□ 0.65
TCF4-250ENST00000625849 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
TCF4-250ENST00000625849 KCNA4P22459 653 aa19.08■□□□□ 0.64
TCF4-250ENST00000625849 DSG3P32926 999 aa19.08■□□□□ 0.64
TCF4-250ENST00000625849 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
TCF4-250ENST00000625849 APLP2Q06481 763 aa18.82■□□□□ 0.6
TCF4-250ENST00000625849 POTEHQ6S545 545 aa18.76■□□□□ 0.59
TCF4-250ENST00000625849 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
TCF4-250ENST00000625849 ZNF219Q9P2Y4 722 aaPredicted RBP18.72■□□□□ 0.59
TCF4-250ENST00000625849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
TCF4-250ENST00000625849 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
TCF4-250ENST00000625849 ABCB7O75027 752 aa18.65■□□□□ 0.58
TCF4-250ENST00000625849 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
TCF4-250ENST00000625849 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
TCF4-250ENST00000625849 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
TCF4-250ENST00000625849 POLA2Q14181 598 aa18.16■□□□□ 0.5
TCF4-250ENST00000625849 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
TCF4-250ENST00000625849 CHRDL2Q6WN34 429 aa17.95■□□□□ 0.46
TCF4-250ENST00000625849 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
TCF4-250ENST00000625849 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
TCF4-250ENST00000625849 ZBTB12Q9Y330 459 aaPredicted RBP17.82■□□□□ 0.44
TCF4-250ENST00000625849 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
TCF4-250ENST00000625849 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
TCF4-250ENST00000625849 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
TCF4-250ENST00000625849 ZBTB22O15209 634 aa17.51■□□□□ 0.39
TCF4-250ENST00000625849 PIP4P2Q8N4L2 257 aa17.45■□□□□ 0.38
TCF4-250ENST00000625849 SP7Q8TDD2 431 aaPredicted RBP17.44■□□□□ 0.38
TCF4-250ENST00000625849 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
TCF4-250ENST00000625849 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
TCF4-250ENST00000625849 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.36
TCF4-250ENST00000625849 FBLN2P98095 1184 aa17.24■□□□□ 0.35
TCF4-250ENST00000625849 HAX1O00165 279 aa17.23■□□□□ 0.35
TCF4-250ENST00000625849 SPDYE2BA6NHP3 402 aa17.22■□□□□ 0.35
TCF4-250ENST00000625849 SPDYE6P0CI01 402 aa17.22■□□□□ 0.35
TCF4-250ENST00000625849 SPDYE2Q495Y8 402 aa17.22■□□□□ 0.35
TCF4-250ENST00000625849 MKRN4PQ13434 485 aaPredicted RBP17.02■□□□□ 0.32
TCF4-250ENST00000625849 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
TCF4-250ENST00000625849 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
TCF4-250ENST00000625849 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
TCF4-250ENST00000625849 PRKAR2AP13861 404 aaKnown RBP16.95■□□□□ 0.3
TCF4-250ENST00000625849 EVX2Q03828 476 aa16.95■□□□□ 0.3
TCF4-250ENST00000625849 SSUH2Q9Y2M2 353 aa16.94■□□□□ 0.3
TCF4-250ENST00000625849 C19orf67A6NJJ6 358 aa16.76■□□□□ 0.27
TCF4-250ENST00000625849 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
TCF4-250ENST00000625849 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
TCF4-250ENST00000625849 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
TCF4-250ENST00000625849 GABBR2O75899 941 aa16.58■□□□□ 0.24
TCF4-250ENST00000625849 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
TCF4-250ENST00000625849 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
TCF4-250ENST00000625849 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
TCF4-250ENST00000625849 LHX8Q68G74 356 aa16.36■□□□□ 0.21
TCF4-250ENST00000625849 CLCN6P51797 869 aa16.25■□□□□ 0.19
TCF4-250ENST00000625849 POTEIP0CG38 1075 aa16.21■□□□□ 0.19
TCF4-250ENST00000625849 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
TCF4-250ENST00000625849 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
TCF4-250ENST00000625849 ZNF579Q8NAF0 562 aaKnown RBP16.13■□□□□ 0.17
TCF4-250ENST00000625849 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
TCF4-250ENST00000625849 DCBLD2Q96PD2 775 aa16.1■□□□□ 0.17
TCF4-250ENST00000625849 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
TCF4-250ENST00000625849 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
TCF4-250ENST00000625849 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
TCF4-250ENST00000625849 GALR2O43603 387 aaPredicted RBP15.93■□□□□ 0.14
TCF4-250ENST00000625849 NPM1P06748 294 aaKnown RBP eCLIP15.88■□□□□ 0.13
TCF4-250ENST00000625849 PHF12Q96QT6 1004 aa15.85■□□□□ 0.13
TCF4-250ENST00000625849 MNX1P50219 401 aaPredicted RBP15.81■□□□□ 0.12
TCF4-250ENST00000625849 OTUD5Q96G74 571 aa15.68■□□□□ 0.1
TCF4-250ENST00000625849 POTEB2H3BUK9 544 aa15.66■□□□□ 0.1
TCF4-250ENST00000625849 MS4A3Q96HJ5 214 aa15.64■□□□□ 0.09
TCF4-250ENST00000625849 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
TCF4-250ENST00000625849 PROM2Q8N271 834 aa15.62■□□□□ 0.09
TCF4-250ENST00000625849 ASTLQ6HA08 431 aaPredicted RBP15.58■□□□□ 0.08
TCF4-250ENST00000625849 TSPYL2Q9H2G4 693 aaPredicted RBP15.57■□□□□ 0.08
TCF4-250ENST00000625849 PLSCR2Q9NRY7 297 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms