RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 IFIT3O14879 490 aaKnown RBP16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 MBD4O95243 580 aa16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 EVA1CP58658 441 aa16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 NR5A1Q13285 461 aa16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 ZBTB38Q8NAP3 1195 aaPredicted RBP16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 CCDC150Q8NCX0 1101 aa16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 ZSWIM5Q9P217 1185 aa16.52■□□□□ 0.24
PCDHGA3-203ENST00000619750 ERICH4A6NGS2 130 aa16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 COBLO75128 1261 aa16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 PCCAP05165 728 aaPredicted RBP16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 CASP1P29466 404 aa16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 TRIM29Q14134 588 aa16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 NUP133Q8WUM0 1156 aa16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 PIGBQ92521 554 aa16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 GTPBP4Q9BZE4 634 aaKnown RBP16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 ATG3Q9NT62 314 aa16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 FAM217BQ9NTX9 383 aaPredicted RBP16.52■□□□□ 0.23
PCDHGA3-203ENST00000619750 URI1O94763 535 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 ADKP55263 362 aaKnown RBP16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 USP49Q70CQ1 688 aa16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 IMPACTQ9P2X3 320 aa16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 KCNH3Q9ULD8 1083 aa16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 MYL5Q02045 173 aa16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 SYCP1Q15431 976 aa16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 ARHGAP29Q52LW3 1261 aa16.51■□□□□ 0.23
PCDHGA3-203ENST00000619750 ANKRD18BA2A2Z9 1011 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 NLRP10Q86W26 655 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 IGDCC4Q8TDY8 1250 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 CHMP4CQ96CF2 233 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 DESI2Q9BSY9 194 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 NAPBQ9H115 298 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 INTS13Q9NVM9 706 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 SLC12A7Q9Y666 1083 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 CTSWP56202 376 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 PIP4K2BP78356 416 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 FMR1Q06787 632 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 NTRK3Q16288 839 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 CARD10Q9BWT7 1032 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
PCDHGA3-203ENST00000619750 POLR2DO15514 142 aaKnown RBP16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 CSF1RP07333 972 aa16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 FBXL16Q8N461 479 aa16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 OXER1Q8TDS5 423 aa16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 BPIFA3Q9BQP9 254 aa16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 HPSEQ9Y251 543 aa16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 CPLX2Q6PUV4 134 aaKnown RBP16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 PCDHB6Q9Y5E3 794 aa16.49■□□□□ 0.23
PCDHGA3-203ENST00000619750 C4AP0C0L4 1744 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 KLHL10Q6JEL2 608 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 OLFM4Q6UX06 510 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 KRT222Q8N1A0 295 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 CARD6Q9BX69 1037 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 TUBE1Q9UJT0 475 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 MORC2Q9Y6X9 1032 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 PDE8BO95263 885 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 TOB1P50616 345 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 CLCN6P51797 869 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 RASGRF1Q13972 1273 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
PCDHGA3-203ENST00000619750 AKAP11Q9UKA4 1901 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 WTIPA6NIX2 430 aaPredicted RBP16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 UBAP1LF5GYI3 381 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 STX17P56962 302 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 ZSWIM4Q9H7M6 989 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 SAMSN1Q9NSI8 373 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 NRDCO43847 1150 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 CDKL5O76039 1030 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 TDO2P48775 406 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 KARSQ15046 597 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 GIGYF2Q6Y7W6 1299 aaKnown RBP16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 TOGARAM2Q6ZUX3 1019 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 LCORLQ8N3X6 602 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 CPLX3Q8WVH0 158 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 STAMQ92783 540 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 IRX2Q9BZI1 471 aaPredicted RBP16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
PCDHGA3-203ENST00000619750 NFE2L3Q9Y4A8 694 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms