RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 TPP2P29144 1249 aaPredicted RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 GPS2Q13227 327 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 EIF4A2Q14240 407 aaKnown RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 KIAA0753Q2KHM9 967 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 SKOR2Q2VWA4 1001 aaPredicted RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 TEX35Q5T0J7 233 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 TAS1R3Q7RTX0 852 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 NT5DC4Q86YG4 428 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 FAM114A1Q8IWE2 563 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 STK11IPQ8N1F8 1099 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 TRIML1Q8N9V2 468 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 ZNF280CQ8ND82 737 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 SVIPQ8NHG7 77 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 GABPB2Q8TAK5 448 aaPredicted RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 USP33Q8TEY7 942 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 JAKMIP2Q96AA8 810 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 RUNDC1Q96C34 613 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 ZBTB10Q96DT7 871 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 TRIM11Q96F44 468 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 DHTKD1Q96HY7 919 aaPredicted RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 TTC14Q96N46 770 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 GSDMAQ96QA5 445 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 MPHOSPH6Q99547 160 aaKnown RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 MAP3K14Q99558 947 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 DUSP9Q99956 384 aaKnown RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 SH3GL1Q99961 368 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 GINM1Q9NU53 330 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 TRMT1Q9NXH9 659 aaKnown RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 POLKQ9UBT6 870 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 ZKSCAN5Q9Y2L8 839 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 PCDHB11Q9Y5F2 797 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 N6AMT1Q9Y5N5 214 aa6.4□□□□□ -1.38
CCL16-206ENST00000613642 LRRFIP2Q9Y608 721 aaKnown RBP6.4□□□□□ -1.38
CCL16-206ENST00000613642 BRD4O60885 1362 aaPredicted RBP6.4□□□□□ -1.39
CCL16-206ENST00000613642 WASLO00401 505 aaPredicted RBP6.39□□□□□ -1.39
CCL16-206ENST00000613642 THBS1P07996 1170 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 GCFC2P16383 781 aaKnown RBP6.39□□□□□ -1.39
CCL16-206ENST00000613642 LMNB1P20700 586 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 POU5F1BQ06416 359 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 NSUN2Q08J23 767 aaKnown RBP eCLIP6.39□□□□□ -1.39
CCL16-206ENST00000613642 WTAPQ15007 396 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 CNGA3Q16281 694 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 KIF4BQ2VIQ3 1234 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 CCDC144BQ3MJ40 725 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 COBLL1Q53SF7 1204 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 CCDC158Q5M9N0 1113 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 SFMBT2Q5VUG0 894 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 WAPLQ7Z5K2 1190 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 KIAA1328Q86T90 577 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 CCDC144CPQ8IYA2 1237 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 PEX5LQ8IYB4 626 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 CLASRPQ8N2M8 674 aaKnown RBP6.39□□□□□ -1.39
CCL16-206ENST00000613642 NEDD1Q8NHV4 660 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 ERMNQ8TAM6 284 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 ANKRD24Q8TF21 1146 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 THOC1Q96FV9 657 aaKnown RBP6.39□□□□□ -1.39
CCL16-206ENST00000613642 RNPC3Q96LT9 517 aaKnown RBP6.39□□□□□ -1.39
CCL16-206ENST00000613642 SCLT1Q96NL6 688 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 UTP14AQ9BVJ6 771 aaKnown RBP6.39□□□□□ -1.39
CCL16-206ENST00000613642 LRRCC1Q9C099 1032 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 TMX1Q9H3N1 280 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 SPC25Q9HBM1 224 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 TIMMDC1Q9NPL8 285 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 CHMP5Q9NZZ3 219 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 SFMBT1Q9UHJ3 866 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 MKL2Q9ULH7 1088 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 HRH3Q9Y5N1 445 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 SOS1Q07889 1333 aaPredicted RBP6.39□□□□□ -1.39
CCL16-206ENST00000613642 AKNAQ7Z591 1439 aa6.39□□□□□ -1.39
CCL16-206ENST00000613642 MSTNO14793 375 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 OIP5O43482 229 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 PLIN1O60240 522 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 GNRH1P01148 92 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 CCNCP24863 283 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 PIK3CAP42336 1068 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 FAM160A1Q05DH4 1040 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 BIRC3Q13489 604 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 SEPT2Q15019 361 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 ZRSR1Q15695 479 aaKnown RBP6.38□□□□□ -1.39
CCL16-206ENST00000613642 NFE2L2Q16236 605 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 MUM1Q2TAK8 710 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 NBPF8Q3BBV2 869 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 TSGA10IPQ3SY00 556 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 ALDH1L2Q3SY69 923 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 PODNQ7Z5L7 613 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 DAAM2Q86T65 1068 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 ANKRD18AQ8IVF6 992 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 C10orf67Q8IYJ2 551 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 ZNF483Q8TF39 744 aaPredicted RBP6.38□□□□□ -1.39
CCL16-206ENST00000613642 ATRIPQ8WXE1 791 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 RTF1Q92541 710 aaKnown RBP6.38□□□□□ -1.39
CCL16-206ENST00000613642 ESYT1Q9BSJ8 1104 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 YIPF2Q9BWQ6 316 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 CFHR5Q9BXR6 569 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 ALDH8A1Q9H2A2 487 aaPredicted RBP6.38□□□□□ -1.39
CCL16-206ENST00000613642 NRDE2Q9H7Z3 1164 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 HOMER3Q9NSC5 361 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 DCAF16Q9NXF7 216 aa6.38□□□□□ -1.39
CCL16-206ENST00000613642 TUBA8Q9NY65 449 aaPredicted RBP6.38□□□□□ -1.39
CCL16-206ENST00000613642 SEL1LQ9UBV2 794 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms