RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
CCL16-206ENST00000613642 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
CCL16-206ENST00000613642 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
CCL16-206ENST00000613642 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
CCL16-206ENST00000613642 FOXD1Q16676 465 aa15.96■□□□□ 0.15
CCL16-206ENST00000613642 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
CCL16-206ENST00000613642 MSH5O43196 834 aa14.94□□□□□ -0.02
CCL16-206ENST00000613642 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
CCL16-206ENST00000613642 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
CCL16-206ENST00000613642 ADRA2BP18089 450 aa14.84□□□□□ -0.03
CCL16-206ENST00000613642 POTEDQ86YR6 584 aa14.65□□□□□ -0.06
CCL16-206ENST00000613642 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
CCL16-206ENST00000613642 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
CCL16-206ENST00000613642 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
CCL16-206ENST00000613642 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
CCL16-206ENST00000613642 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
CCL16-206ENST00000613642 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
CCL16-206ENST00000613642 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
CCL16-206ENST00000613642 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
CCL16-206ENST00000613642 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
CCL16-206ENST00000613642 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
CCL16-206ENST00000613642 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
CCL16-206ENST00000613642 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
CCL16-206ENST00000613642 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
CCL16-206ENST00000613642 C1QBPQ07021 282 aaKnown RBP12.57□□□□□ -0.4
CCL16-206ENST00000613642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCL16-206ENST00000613642 KCNA4P22459 653 aa12.32□□□□□ -0.44
CCL16-206ENST00000613642 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
CCL16-206ENST00000613642 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
CCL16-206ENST00000613642 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
CCL16-206ENST00000613642 CAPN15O75808 1086 aa11.94□□□□□ -0.5
CCL16-206ENST00000613642 DSG3P32926 999 aa11.94□□□□□ -0.5
CCL16-206ENST00000613642 APLP2Q06481 763 aa11.81□□□□□ -0.52
CCL16-206ENST00000613642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
CCL16-206ENST00000613642 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
CCL16-206ENST00000613642 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
CCL16-206ENST00000613642 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
CCL16-206ENST00000613642 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
CCL16-206ENST00000613642 ABCB7O75027 752 aa11.67□□□□□ -0.54
CCL16-206ENST00000613642 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
CCL16-206ENST00000613642 SLC4A1APQ9BWU0 796 aaKnown RBP11.61□□□□□ -0.55
CCL16-206ENST00000613642 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
CCL16-206ENST00000613642 POLA2Q14181 598 aa11.46□□□□□ -0.57
CCL16-206ENST00000613642 POTEHQ6S545 545 aa11.46□□□□□ -0.57
CCL16-206ENST00000613642 ATF5Q9Y2D1 282 aaPredicted RBP11.39□□□□□ -0.59
CCL16-206ENST00000613642 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
CCL16-206ENST00000613642 ZBTB22O15209 634 aa11.34□□□□□ -0.59
CCL16-206ENST00000613642 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
CCL16-206ENST00000613642 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
CCL16-206ENST00000613642 CHRDL2Q6WN34 429 aa11.14□□□□□ -0.63
CCL16-206ENST00000613642 AKT1S1Q96B36 256 aa11.12□□□□□ -0.63
CCL16-206ENST00000613642 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
CCL16-206ENST00000613642 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
CCL16-206ENST00000613642 FBLN2P98095 1184 aa10.91□□□□□ -0.66
CCL16-206ENST00000613642 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
CCL16-206ENST00000613642 PITPNM1O00562 1244 aa10.88□□□□□ -0.67
CCL16-206ENST00000613642 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
CCL16-206ENST00000613642 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
CCL16-206ENST00000613642 MKRN4PQ13434 485 aaPredicted RBP10.87□□□□□ -0.67
CCL16-206ENST00000613642 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
CCL16-206ENST00000613642 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCL16-206ENST00000613642 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
CCL16-206ENST00000613642 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
CCL16-206ENST00000613642 SP7Q8TDD2 431 aaPredicted RBP10.73□□□□□ -0.69
CCL16-206ENST00000613642 ZNF692Q9BU19 519 aaPredicted RBP10.73□□□□□ -0.69
CCL16-206ENST00000613642 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
CCL16-206ENST00000613642 HAX1O00165 279 aa10.66□□□□□ -0.7
CCL16-206ENST00000613642 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
CCL16-206ENST00000613642 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
CCL16-206ENST00000613642 EVX2Q03828 476 aa10.57□□□□□ -0.72
CCL16-206ENST00000613642 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCL16-206ENST00000613642 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
CCL16-206ENST00000613642 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
CCL16-206ENST00000613642 C19orf67A6NJJ6 358 aa10.47□□□□□ -0.73
CCL16-206ENST00000613642 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
CCL16-206ENST00000613642 MYT1Q01538 1121 aa10.45□□□□□ -0.74
CCL16-206ENST00000613642 PELP1Q8IZL8 1130 aaKnown RBP10.33□□□□□ -0.76
CCL16-206ENST00000613642 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
CCL16-206ENST00000613642 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
CCL16-206ENST00000613642 GABBR2O75899 941 aa10.31□□□□□ -0.76
CCL16-206ENST00000613642 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
CCL16-206ENST00000613642 TTBK1Q5TCY1 1321 aaPredicted RBP10.25□□□□□ -0.77
CCL16-206ENST00000613642 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
CCL16-206ENST00000613642 CREBZFQ9NS37 354 aa10.24□□□□□ -0.77
CCL16-206ENST00000613642 SLC24A1O60721 1099 aa10.22□□□□□ -0.77
CCL16-206ENST00000613642 CLCN6P51797 869 aa10.17□□□□□ -0.78
CCL16-206ENST00000613642 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
CCL16-206ENST00000613642 PROM2Q8N271 834 aa10.11□□□□□ -0.79
CCL16-206ENST00000613642 ZNF579Q8NAF0 562 aaKnown RBP10.11□□□□□ -0.79
CCL16-206ENST00000613642 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
CCL16-206ENST00000613642 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
CCL16-206ENST00000613642 LHX8Q68G74 356 aa10.07□□□□□ -0.8
CCL16-206ENST00000613642 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCL16-206ENST00000613642 DCBLD2Q96PD2 775 aa10□□□□□ -0.81
CCL16-206ENST00000613642 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
CCL16-206ENST00000613642 GALR2O43603 387 aaPredicted RBP9.98□□□□□ -0.81
CCL16-206ENST00000613642 PHF12Q96QT6 1004 aa9.95□□□□□ -0.82
CCL16-206ENST00000613642 MIER1Q8N108 512 aa9.83□□□□□ -0.84
CCL16-206ENST00000613642 MS4A3Q96HJ5 214 aa9.83□□□□□ -0.84
CCL16-206ENST00000613642 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms