RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 CRKP46108 304 aa27.64■■■□□ 2.01
SYMPK-212ENST00000598896 Q6ZUG5 572 aa27.64■■■□□ 2.01
SYMPK-212ENST00000598896 HSP90AA1P07900 732 aaKnown RBP27.63■■■□□ 2.01
SYMPK-212ENST00000598896 PLCG2P16885 1265 aa27.63■■■□□ 2.01
SYMPK-212ENST00000598896 RALYLQ86SE5 291 aaKnown RBP27.63■■■□□ 2.01
SYMPK-212ENST00000598896 STK11IPQ8N1F8 1099 aa27.63■■■□□ 2.01
SYMPK-212ENST00000598896 STAG1Q8WVM7 1258 aa27.63■■■□□ 2.01
SYMPK-212ENST00000598896 TPCN1Q9ULQ1 816 aa27.63■■■□□ 2.01
SYMPK-212ENST00000598896 PCDHAC2Q9Y5I4 1007 aa27.63■■■□□ 2.01
SYMPK-212ENST00000598896 VIL1P09327 827 aaKnown RBP27.62■■■□□ 2.01
SYMPK-212ENST00000598896 USP17L8P0C7I0 530 aa27.62■■■□□ 2.01
SYMPK-212ENST00000598896 ANTXR2P58335 489 aa27.62■■■□□ 2.01
SYMPK-212ENST00000598896 APOBEC3HQ6NTF7 200 aaKnown RBP27.62■■■□□ 2.01
SYMPK-212ENST00000598896 TEX11Q8IYF3 940 aa27.62■■■□□ 2.01
SYMPK-212ENST00000598896 B4E1Z4 1266 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 CYP2D6P10635 497 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 RSBN1LQ6PCB5 846 aaPredicted RBP27.61■■■□□ 2.01
SYMPK-212ENST00000598896 SYT17Q9BSW7 474 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 MCM9Q9NXL9 1143 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 ARPP21Q9UBL0 812 aaPredicted RBP27.61■■■□□ 2.01
SYMPK-212ENST00000598896 TRDNQ13061 729 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 CUL4AQ13619 759 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 MAPKAPK5Q8IW41 473 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 ZDHHC15Q96MV8 337 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 MRIQ9BWK5 157 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 AGXT2Q9BYV1 514 aa27.61■■■□□ 2.01
SYMPK-212ENST00000598896 ECM29Q5VYK3 1845 aa27.6■■■□□ 2.01
SYMPK-212ENST00000598896 MCM5P33992 734 aa27.6■■■□□ 2.01
SYMPK-212ENST00000598896 HDLBPQ00341 1268 aaKnown RBP27.6■■■□□ 2.01
SYMPK-212ENST00000598896 ANKRD1Q15327 319 aa27.6■■■□□ 2.01
SYMPK-212ENST00000598896 SBK1Q52WX2 424 aa27.6■■■□□ 2.01
SYMPK-212ENST00000598896 MFSD6Q6ZSS7 791 aa27.6■■■□□ 2.01
SYMPK-212ENST00000598896 GMLQ99445 158 aa27.6■■■□□ 2.01
SYMPK-212ENST00000598896 FLT1P17948 1338 aa27.6■■■□□ 2.01
SYMPK-212ENST00000598896 CXCL9Q07325 125 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 ME3Q16798 604 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 SLC4A8Q2Y0W8 1093 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 CYB5R4Q7L1T6 521 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 JDP2Q8WYK2 163 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 BRF1Q92994 677 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 ZBTB12Q9Y330 459 aaPredicted RBP27.59■■■□□ 2.01
SYMPK-212ENST00000598896 PRC1O43663 620 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 DDIT3P35638 169 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 MYO3BQ8WXR4 1341 aa27.59■■■□□ 2.01
SYMPK-212ENST00000598896 CDC42EP5Q6NZY7 148 aa27.58■■■□□ 2.01
SYMPK-212ENST00000598896 GPHNQ9NQX3 736 aaPredicted RBP27.58■■■□□ 2.01
SYMPK-212ENST00000598896 SERPINA10Q9UK55 444 aa27.58■■■□□ 2.01
SYMPK-212ENST00000598896 WDHD1O75717 1129 aaPredicted RBP27.57■■■□□ 2
SYMPK-212ENST00000598896 CNNM2Q9H8M5 875 aa27.57■■■□□ 2
SYMPK-212ENST00000598896 USP40Q9NVE5 1235 aa27.57■■■□□ 2
SYMPK-212ENST00000598896 WDR19Q8NEZ3 1342 aa27.57■■■□□ 2
SYMPK-212ENST00000598896 FGD1P98174 961 aa27.57■■■□□ 2
SYMPK-212ENST00000598896 ST3GAL1Q11201 340 aa27.57■■■□□ 2
SYMPK-212ENST00000598896 C12orf60Q5U649 245 aa27.57■■■□□ 2
SYMPK-212ENST00000598896 RNF41Q9H4P4 317 aaPredicted RBP27.57■■■□□ 2
SYMPK-212ENST00000598896 SAP30BPQ9UHR5 308 aaKnown RBP27.57■■■□□ 2
SYMPK-212ENST00000598896 MYH1P12882 1939 aa27.56■■■□□ 2
SYMPK-212ENST00000598896 KDM4AO75164 1064 aa27.56■■■□□ 2
SYMPK-212ENST00000598896 RRP12Q5JTH9 1297 aaKnown RBP27.56■■■□□ 2
SYMPK-212ENST00000598896 FBXL16Q8N461 479 aa27.56■■■□□ 2
SYMPK-212ENST00000598896 KRT23Q9C075 422 aa27.56■■■□□ 2
SYMPK-212ENST00000598896 ZSWIM5Q9P217 1185 aa27.56■■■□□ 2
SYMPK-212ENST00000598896 FGRP09769 529 aa27.55■■■□□ 2
SYMPK-212ENST00000598896 RBM5P52756 815 aaKnown RBP eCLIP27.55■■■□□ 2
SYMPK-212ENST00000598896 ZSCAN31Q96LW9 406 aaPredicted RBP27.55■■■□□ 2
SYMPK-212ENST00000598896 DDX4Q9NQI0 724 aaKnown RBP27.55■■■□□ 2
SYMPK-212ENST00000598896 SH2B1Q9NRF2 756 aaPredicted RBP27.55■■■□□ 2
SYMPK-212ENST00000598896 TOMM22Q9NS69 142 aa27.55■■■□□ 2
SYMPK-212ENST00000598896 PLCD1P51178 756 aa27.54■■■□□ 2
SYMPK-212ENST00000598896 APOBRQ0VD83 1088 aa27.54■■■□□ 2
SYMPK-212ENST00000598896 PICALMQ13492 652 aa27.54■■■□□ 2
SYMPK-212ENST00000598896 CIAPIN1Q6FI81 312 aa27.54■■■□□ 2
SYMPK-212ENST00000598896 NECAB1Q8N987 351 aa27.54■■■□□ 2
SYMPK-212ENST00000598896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.54■■■□□ 2
SYMPK-212ENST00000598896 ROBO3Q96MS0 1386 aa27.54■■■□□ 2
SYMPK-212ENST00000598896 PRDM1O75626 825 aa27.53■■■□□ 2
SYMPK-212ENST00000598896 CFAP100Q494V2 611 aa27.53■■■□□ 2
SYMPK-212ENST00000598896 INTS4Q96HW7 963 aaKnown RBP27.53■■■□□ 2
SYMPK-212ENST00000598896 NFIAQ12857 509 aa27.52■■■□□ 2
SYMPK-212ENST00000598896 ARHGAP27Q6ZUM4 889 aa27.52■■■□□ 2
SYMPK-212ENST00000598896 CCDC83Q8IWF9 413 aa27.52■■■□□ 2
SYMPK-212ENST00000598896 AGBL3Q8NEM8 1001 aa27.52■■■□□ 2
SYMPK-212ENST00000598896 FZD9O00144 591 aa27.51■■□□□ 1.99
SYMPK-212ENST00000598896 PCP11498 1178 aaKnown RBP27.51■■□□□ 1.99
SYMPK-212ENST00000598896 DYNLL2Q96FJ2 89 aa27.51■■□□□ 1.99
SYMPK-212ENST00000598896 POLR3DP05423 398 aaPredicted RBP27.51■■□□□ 1.99
SYMPK-212ENST00000598896 CACNB3P54284 484 aa27.51■■□□□ 1.99
SYMPK-212ENST00000598896 STK3Q13188 491 aa27.51■■□□□ 1.99
SYMPK-212ENST00000598896 PRMT6Q96LA8 375 aaPredicted RBP27.51■■□□□ 1.99
SYMPK-212ENST00000598896 SH2B2O14492 632 aaPredicted RBP27.5■■□□□ 1.99
SYMPK-212ENST00000598896 AMOTL1Q8IY63 956 aa27.5■■□□□ 1.99
SYMPK-212ENST00000598896 IGDCC4Q8TDY8 1250 aa27.5■■□□□ 1.99
SYMPK-212ENST00000598896 ORC4O43929 436 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 SLC3A2P08195 630 aaKnown RBP27.49■■□□□ 1.99
SYMPK-212ENST00000598896 YBX3P16989 372 aaKnown RBP eCLIP27.49■■□□□ 1.994e-8■□□□□ 9.1
SYMPK-212ENST00000598896 EVCP57679 992 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 ESR2Q92731 530 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 TMEM87BQ96K49 555 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 ZKSCAN3Q9BRR0 538 aa27.49■■□□□ 1.99
SYMPK-212ENST00000598896 SENP2Q9HC62 589 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms